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SCFD2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 152579 sec1 family domain containing 2 chr4 - 54231742 - 54237242 54232242 Transcription Factor Binding Sites   Download all TFBS in the SCFD2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HOXD12_homeodomain_DBD_monomeric_9_1 SELEX + 54232585 54232593 5.0E-06 ATAATAAAA 9 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 54232584 54232596 7.0E-06 GATAATAAAAACA 13 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX + 54232585 54232594 1.0E-06 ATAATAAAAA 10 THRB_nuclearreceptor_DBD_dimeric_20_1 SELEX + 54231372 54231391 2.0E-06 ATGACCTGACTTAAGGAACC 20 Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX + 54232585 54232594 3.0E-06 ATAATAAAAA 10 SPIC_ETS_full_monomeric_14_1 SELEX - 54231327 54231340 5.0E-06 AAGAACAGGAAGAA 14 EWSR1-FLI1_MA0149.1 JASPAR + 54232295 54232312 0.0E+00 GGGAGTGAGGAAGGATGG 18 NFYA_MA0060.1 JASPAR - 54232270 54232285 7.0E-06 TCTAGCCAATCACCGC 16 IRF7_IRF_DBD_trimeric_17_1 SELEX + 54232495 54232511 2.0E-06 AATCCGAAATTTGGTAT 17 HOMEZ_HOMEZ_DBD_monomer-or-dimer_12_1 SELEX + 54232579 54232590 9.0E-06 AAAAAGATAATA 12 Klf4_MA0039.2 JASPAR + 54232330 54232339 5.0E-06 TGGGTGGGGC 10 OTX2_homeodomain_DBD_dimeric_15_1 SELEX - 54232725 54232739 9.0E-06 TTTAAGCCTATAAGA 15 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX + 54232584 54232593 1.0E-06 GATAATAAAA 10 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX + 54232585 54232593 3.0E-06 ATAATAAAA 9 HOXC11_homeodomain_full_monomeric_11_2 SELEX + 54232584 54232594 4.0E-06 GATAATAAAAA 11 FOXI1_MA0042.1 JASPAR - 54227881 54227892 2.0E-06 TCATATTTATAT 12 znf143_MA0088.1 JASPAR + 54231502 54231521 5.0E-06 CATCACCCAGGCTTCCCAGC 20 Otx1_homeodomain_DBD_dimeric_15_1 SELEX - 54232725 54232739 9.0E-06 TTTAAGCCTATAAGA 15 ZBTB49_C2H2_DBD_monomeric_17_1 SELEX + 54231522 54231538 4.0E-06 TTCCTCTTGTCCGGTCG 17 SOX7_HMG_full_dimeric_16_1 SELEX - 54232660 54232675 1.0E-05 AACAACAGGGTTTGTT 16 HOXA13_homeodomain_full_monomeric_10_1 SELEX + 54232585 54232594 3.0E-06 ATAATAAAAA 10 TEAD3_TEA_DBD_dimeric_17_1 SELEX - 54227820 54227836 5.0E-06 TCATGCCTGTAATTCCA 17 MYBL1_MYB_DBD_dimeric_12_1 SELEX + 54232257 54232268 4.0E-06 GACGTTAAACTG 12 SPDEF_ETS_full_putative-multimer_16_1 SELEX + 54230162 54230177 9.0E-06 AGAGATAGAAGTAACA 16 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX + 54232585 54232594 6.0E-06 ATAATAAAAA 10 CPEB1_RRM_full_monomeric_8_1 SELEX + 54232484 54232491 4.0E-06 AATAAAAA 8 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX + 54232584 54232594 2.0E-06 GATAATAAAAA 11 DPRX_homeodomain_DBD_monomeric_11_1 SELEX + 54232435 54232445 8.0E-06 CAGATAATCTT 11 DPRX_homeodomain_DBD_monomeric_11_1 SELEX + 54232448 54232458 8.0E-06 CAGATAATCTT 11 CDX2_homeodomain_DBD_monomeric_9_1 SELEX + 54232585 54232593 3.0E-06 ATAATAAAA 9 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 54232584 54232596 6.0E-06 GATAATAAAAACA 13 CDX1_homeodomain_DBD_monomeric_9_1 SELEX + 54232585 54232593 3.0E-06 ATAATAAAA 9 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX + 54232584 54232594 1.0E-06 GATAATAAAAA 11 V_FOXP1_01_M00987 TRANSFAC - 54227871 54227890 6.0E-06 ATATTTATATGAGTATTTTA 20 V_FOXP1_01_M00987 TRANSFAC - 54232578 54232597 0.0E+00 TTGTTTTTATTATCTTTTTC 20 V_STAT5A_Q6_M01890 TRANSFAC - 54232465 54232477 9.0E-06 ACTTTTCAAGGAA 13 V_DBX1_01_M01483 TRANSFAC - 54227861 54227877 9.0E-06 TATTTTATAGATAAAAA 17 V_FREAC7_01_M00293 TRANSFAC + 54227878 54227893 1.0E-05 CTCATATAAATATGAC 16 V_AR_02_M00953 TRANSFAC + 54227762 54227788 7.0E-06 CTCTGTTGCCCAGGCTGTTCTTGAATT 27 V_GATA1_Q6_M02004 TRANSFAC + 54232578 54232592 7.0E-06 GAAAAAGATAATAAA 15 V_BTEB3_Q5_M01865 TRANSFAC - 54231403 54231415 2.0E-06 GTACGGGAGGAGT 13 V_XFD1_01_M00267 TRANSFAC + 54227880 54227893 1.0E-06 CATATAAATATGAC 14 V_GATA2_02_M00348 TRANSFAC - 54227862 54227871 9.0E-06 ATAGATAAAA 10 V_NFY_Q6_M00185 TRANSFAC - 54232273 54232283 1.0E-06 TAGCCAATCAC 11 V_EVI1_04_M00081 TRANSFAC + 54232573 54232587 3.0E-06 AACTAGAAAAAGATA 15 V_BCL6_01_M01183 TRANSFAC - 54232579 54232594 7.0E-06 TTTTTATTATCTTTTT 16 V_GM397_03_M02760 TRANSFAC - 54231548 54231564 4.0E-06 AGGATGTGCACCTCCTT 17 V_FOXO4_02_M00476 TRANSFAC + 54232668 54232681 9.0E-06 CTGTTGTTCTCATT 14 V_GATA3_03_M00351 TRANSFAC + 54232581 54232590 1.0E-06 AAAGATAATA 10 V_HOXA13_02_M01297 TRANSFAC + 54232483 54232491 4.0E-06 AAATAAAAA 9 V_AR_Q6_01_M01996 TRANSFAC + 54231326 54231340 4.0E-06 CTTCTTCCTGTTCTT 15 V_FOXJ1_04_M02854 TRANSFAC + 54232583 54232597 9.0E-06 AGATAATAAAAACAA 15 V_MEIS1AHOXA9_01_M00420 TRANSFAC - 54232734 54232747 8.0E-06 TGAGAGTTTTTAAG 14 V_PITX2_Q6_M02114 TRANSFAC - 54227820 54227829 9.0E-06 TGTAATTCCA 10 V_HTF_01_M00538 TRANSFAC + 54232519 54232542 2.0E-06 AGATATGAACACGTCTCCAAAAGT 24 V_HOXD13_01_M01404 TRANSFAC - 54227737 54227752 7.0E-06 GTCTCTATAAAAAATA 16 V_HOXD13_01_M01404 TRANSFAC + 54227864 54227879 1.0E-06 TTATCTATAAAATACT 16 V_HOXD13_01_M01404 TRANSFAC + 54232582 54232597 8.0E-06 AAGATAATAAAAACAA 16 V_ATF4_Q2_M00514 TRANSFAC + 54231376 54231387 5.0E-06 CCTGACTTAAGG 12 V_NFY_Q6_01_M00775 TRANSFAC - 54232274 54232286 4.0E-06 CTCTAGCCAATCA 13 V_HOXC13_01_M01317 TRANSFAC + 54227874 54227889 4.0E-06 AATACTCATATAAATA 16 V_BARBIE_01_M00238 TRANSFAC + 54232358 54232372 8.0E-06 CTCAAAAGCTCGTGG 15 V_NFY_C_M00209 TRANSFAC + 54232272 54232285 1.0E-06 GGTGATTGGCTAGA 14 V_ELF4_04_M02850 TRANSFAC - 54227736 54227752 5.0E-06 GTCTCTATAAAAAATAC 17 V_FOXA2_02_M02853 TRANSFAC + 54232581 54232595 5.0E-06 AAAGATAATAAAAAC 15 V_HOXB13_01_M01467 TRANSFAC + 54232582 54232597 5.0E-06 AAGATAATAAAAACAA 16 V_TEF_Q6_M00672 TRANSFAC + 54227875 54227886 3.0E-06 ATACTCATATAA 12 V_SOX7_04_M02911 TRANSFAC - 54227872 54227893 1.0E-06 GTCATATTTATATGAGTATTTT 22 V_STAT1_01_M00224 TRANSFAC + 54232163 54232183 3.0E-06 CACCGCTTCCGGAAATTGGGC 21 V_CEBPB_02_M00117 TRANSFAC + 54229944 54229957 6.0E-06 AGATTGCGCCATTG 14 V_AMEF2_Q6_M00403 TRANSFAC - 54227735 54227752 1.0E-06 GTCTCTATAAAAAATACA 18 V_HOXB9_01_M01426 TRANSFAC + 54232582 54232597 3.0E-06 AAGATAATAAAAACAA 16 V_CDX2_01_M01449 TRANSFAC + 54232581 54232596 2.0E-06 AAAGATAATAAAAACA 16 V_TATA_C_M00216 TRANSFAC + 54227867 54227876 3.0E-06 TCTATAAAAT 10 V_SFPI1_04_M02896 TRANSFAC - 54232167 54232180 2.0E-06 CAATTTCCGGAAGC 14 V_CDX1_01_M01373 TRANSFAC + 54232581 54232596 1.0E-06 AAAGATAATAAAAACA 16 V_OCT1_04_M00138 TRANSFAC + 54227869 54227891 1.0E-05 TATAAAATACTCATATAAATATG 23 V_OCT1_04_M00138 TRANSFAC + 54227873 54227895 5.0E-06 AAATACTCATATAAATATGACTA 23 V_MEF2_04_M00233 TRANSFAC - 54227734 54227755 6.0E-06 CCTGTCTCTATAAAAAATACAA 22 V_GATA4_Q3_M00632 TRANSFAC + 54230164 54230175 8.0E-06 AGATAGAAGTAA 12 V_GR_Q6_02_M01836 TRANSFAC + 54231329 54231341 9.0E-06 CTTCCTGTTCTTT 13 V_ZNF515_01_M01231 TRANSFAC - 54231955 54231964 4.0E-06 GTGGGGGGTC 10 V_ELF1_Q6_M00746 TRANSFAC - 54231328 54231339 6.0E-06 AGAACAGGAAGA 12 V_HFH8_01_M00294 TRANSFAC - 54227880 54227892 9.0E-06 TCATATTTATATG 13 V_CREM_Q6_M01820 TRANSFAC - 54232253 54232263 7.0E-06 TAACGTCATCA 11 V_CAAT_01_M00254 TRANSFAC - 54232274 54232285 0.0E+00 TCTAGCCAATCA 12 V_CREBP1CJUN_01_M00041 TRANSFAC + 54232256 54232263 1.0E-05 TGACGTTA 8 V_MYOD_01_M00001 TRANSFAC + 54232374 54232385 8.0E-06 GATCAGGTGTTT 12 V_MTF1_06_M02882 TRANSFAC + 54232583 54232596 1.0E-06 AGATAATAAAAACA 14 V_E2_01_M00107 TRANSFAC + 54227838 54227853 5.0E-06 CCACCACACCCGGTAA 16 V_TBP_01_M00471 TRANSFAC + 54227882 54227889 4.0E-06 TATAAATA 8 V_NFYC_Q5_M02107 TRANSFAC - 54232270 54232283 1.0E-06 TAGCCAATCACCGC 14 V_AREB6_02_M00413 TRANSFAC - 54232374 54232385 7.0E-06 AAACACCTGATC 12 V_FOXL1_04_M02753 TRANSFAC + 54232585 54232601 4.0E-06 ATAATAAAAACAACCGT 17 V_GATA3_02_M00350 TRANSFAC + 54232581 54232590 1.0E-06 AAAGATAATA 10 V_T3R_Q6_M00963 TRANSFAC - 54232083 54232091 3.0E-06 ACTGTCCTT 9 V_CBF_01_M01079 TRANSFAC + 54227851 54227866 9.0E-06 TAAGAAGTGGTTTTTA 16 V_XBP1_01_M00251 TRANSFAC - 54232522 54232538 9.0E-06 TTGGAGACGTGTTCATA 17 V_GATA6_01_M00462 TRANSFAC + 54232581 54232590 3.0E-06 AAAGATAATA 10 V_NFY_01_M00287 TRANSFAC - 54232270 54232285 8.0E-06 TCTAGCCAATCACCGC 16 V_STAT1STAT1_Q3_M01212 TRANSFAC - 54232463 54232475 3.0E-06 TTTTCAAGGAACA 13 V_GATA2_03_M00349 TRANSFAC + 54232581 54232590 5.0E-06 AAAGATAATA 10 V_HFH3_01_M00289 TRANSFAC - 54227880 54227892 4.0E-06 TCATATTTATATG 13 V_EWSR1FLI1_01_M02252 TRANSFAC + 54232295 54232312 0.0E+00 GGGAGTGAGGAAGGATGG 18 V_HOXA10_01_M01464 TRANSFAC + 54232582 54232597 1.0E-06 AAGATAATAAAAACAA 16 V_ZFP128_04_M02932 TRANSFAC + 54227861 54227874 8.0E-06 TTTTTATCTATAAA 14 V_NFYA_Q5_M02106 TRANSFAC - 54232270 54232283 2.0E-06 TAGCCAATCACCGC 14 V_HOXD10_01_M01375 TRANSFAC + 54232582 54232598 1.0E-06 AAGATAATAAAAACAAC 17 V_GATA1_06_M00347 TRANSFAC - 54227862 54227871 1.0E-06 ATAGATAAAA 10 V_OTX3_01_M01403 TRANSFAC - 54232489 54232505 2.0E-06 AATTTCGGATTAGGTTT 17

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.