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SHISA3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 152573 shisa homolog 3 (Xenopus laevis) chr4 + 42394855 - 42400355 42399855 Transcription Factor Binding Sites   Download all TFBS in the SHISA3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints TBX21_TBX_full_dimeric_16_1 SELEX - 42398655 42398670 3.0E-06 GGTGTTATGTGAAACC 16 LBX2_homeodomain_DBD_dimeric_13_1 SELEX - 42399400 42399412 7.0E-06 CTGGAGCTAATCA 13 Sox17_MA0078.1 JASPAR + 42399448 42399456 7.0E-06 CTCATTGTC 9 CENPB_CENPB_full_monomeric_15_1 SELEX - 42401032 42401046 7.0E-06 CCCGTGTTTTCCGAA 15 PROX1_PROX_DBD_dimeric_12_1 SELEX + 42399479 42399490 3.0E-06 AAAGACGCCTTG 12 NFKB2_NFAT_DBD_dimeric_13_1 SELEX + 42401005 42401017 5.0E-06 AGGGGCTTCCCCG 13 NFKB2_NFAT_DBD_dimeric_13_1 SELEX - 42401005 42401017 5.0E-06 CGGGGAAGCCCCT 13 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX - 42401172 42401181 7.0E-06 GGCCATAAAA 10 NFATC1_NFAT_full_dimeric_14_1 SELEX - 42399129 42399142 5.0E-06 TTTTCAATGGATAT 14 RUNX2_RUNX_DBD_dimeric_18_1 SELEX - 42400564 42400581 2.0E-06 GACCCGCAGAGACCGCAA 18 HOXC11_homeodomain_full_monomeric_11_2 SELEX - 42401171 42401181 3.0E-06 GGCCATAAAAC 11 SP1_MA0079.2 JASPAR - 42399259 42399268 3.0E-06 CCCCTCCCCC 10 SP1_MA0079.2 JASPAR + 42401013 42401022 7.0E-06 CCCCGCCCCC 10 RFX3_RFX_DBD_dimeric_15_1 SELEX + 42400866 42400880 7.0E-06 CGTTTCTAAGCCACG 15 NR3C2_nuclearreceptor_DBD_dimeric_17_1 SELEX + 42398482 42398498 0.0E+00 GAGAACACTTTGTTCCT 17 NR3C2_nuclearreceptor_DBD_dimeric_17_1 SELEX - 42398482 42398498 0.0E+00 AGGAACAAAGTGTTCTC 17 NFKB1_NFAT_DBD_dimeric_13_1 SELEX + 42401005 42401017 5.0E-06 AGGGGCTTCCCCG 13 NFKB1_NFAT_DBD_dimeric_13_1 SELEX - 42401005 42401017 5.0E-06 CGGGGAAGCCCCT 13 MGA_TBX_DBD_dimeric_18_1 SELEX + 42398654 42398671 6.0E-06 AGGTTTCACATAACACCA 18 Hoxd9_homeodomain_DBD_monomeric_9_1 SELEX - 42401172 42401180 4.0E-06 GCCATAAAA 9 Pou5f1_MA0142.1 JASPAR + 42399134 42399148 8.0E-06 CATTGAAAAGTAAAT 15 PLAG1_MA0163.1 JASPAR + 42400359 42400372 2.0E-06 GGGGCCCTCGGGGA 14 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX - 42401171 42401181 7.0E-06 GGCCATAAAAC 11 CDX2_homeodomain_DBD_monomeric_9_1 SELEX - 42401172 42401180 8.0E-06 GCCATAAAA 9 NR3C1_nuclearreceptor_DBD_dimeric_17_1 SELEX + 42398482 42398498 0.0E+00 GAGAACACTTTGTTCCT 17 NR3C1_nuclearreceptor_DBD_dimeric_17_1 SELEX - 42398482 42398498 0.0E+00 AGGAACAAAGTGTTCTC 17 CDX1_homeodomain_DBD_monomeric_9_1 SELEX - 42401172 42401180 8.0E-06 GCCATAAAA 9 AR_nuclearreceptor_full_dimeric_17_1 SELEX + 42398482 42398498 0.0E+00 GAGAACACTTTGTTCCT 17 AR_nuclearreceptor_full_dimeric_17_1 SELEX - 42398482 42398498 0.0E+00 AGGAACAAAGTGTTCTC 17 RUNX3_RUNX_DBD_dimeric_18_1 SELEX - 42400564 42400581 1.0E-06 GACCCGCAGAGACCGCAA 18 V_KLF15_Q2_M01714 TRANSFAC + 42399242 42399255 5.0E-06 GAGTTGGGGTGTGC 14 V_STAT5A_Q6_M01890 TRANSFAC - 42403543 42403555 1.0E-06 AATTTTCTCAGAA 13 V_MYOD_Q6_M00184 TRANSFAC - 42403508 42403517 7.0E-06 TCCACCTGTC 10 V_AR_02_M00953 TRANSFAC - 42398477 42398503 0.0E+00 ACAAAAGGAACAAAGTGTTCTCAGCTC 27 V_ATF5_01_M01295 TRANSFAC + 42399465 42399475 2.0E-06 CCTCTTCCTTT 11 V_ZFP410_04_M02936 TRANSFAC + 42401010 42401026 6.0E-06 CTTCCCCGCCCCCTATT 17 V_NRSF_Q4_M01028 TRANSFAC + 42398465 42398483 1.0E-06 CTTGTGTCGCTGGAGCTGA 19 V_EVI1_04_M00081 TRANSFAC - 42400842 42400856 8.0E-06 AGACAGAAAAAAAAA 15 V_STAT_Q6_M00777 TRANSFAC - 42398956 42398968 5.0E-06 ACTTTTTCTGGGA 13 V_POU5F1_02_M02245 TRANSFAC + 42399134 42399148 8.0E-06 CATTGAAAAGTAAAT 15 V_AR_Q6_01_M01996 TRANSFAC - 42398482 42398496 1.0E-06 GAACAAAGTGTTCTC 15 V_AR_Q6_01_M01996 TRANSFAC + 42398484 42398498 1.0E-06 GAACACTTTGTTCCT 15 V_EOMES_03_M02747 TRANSFAC - 42400943 42400959 5.0E-06 TGAAAGGCGTGACAATA 17 V_MAF_Q6_M00648 TRANSFAC - 42400890 42400905 5.0E-06 TGAAAGGAAGTCTGCA 16 V_STAT5B_01_M00459 TRANSFAC + 42403540 42403554 4.0E-06 CAATTCTGAGAAAAT 15 V_STAT5B_01_M00459 TRANSFAC - 42403540 42403554 3.0E-06 ATTTTCTCAGAATTG 15 V_SP1_03_M02281 TRANSFAC - 42399259 42399268 3.0E-06 CCCCTCCCCC 10 V_SP1_03_M02281 TRANSFAC + 42401013 42401022 7.0E-06 CCCCGCCCCC 10 V_HFH4_01_M00742 TRANSFAC - 42398630 42398642 9.0E-06 AAGCATTTATTTT 13 V_PU1_Q4_M01172 TRANSFAC + 42399460 42399478 4.0E-06 TCCTCCCTCTTCCTTTTTA 19 V_TCFAP2E_04_M02926 TRANSFAC - 42400842 42400855 1.0E-06 GACAGAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 42400843 42400856 6.0E-06 AGACAGAAAAAAAA 14 V_AR_03_M00956 TRANSFAC - 42398477 42398503 0.0E+00 ACAAAAGGAACAAAGTGTTCTCAGCTC 27 V_STAT4_Q4_M01666 TRANSFAC - 42403538 42403551 5.0E-06 TTCTCAGAATTGCA 14 V_TAL1_Q6_M00993 TRANSFAC + 42400233 42400242 7.0E-06 ACCATCTGCT 10 V_PR_01_M00954 TRANSFAC - 42398477 42398503 4.0E-06 ACAAAAGGAACAAAGTGTTCTCAGCTC 27 V_POLY_C_M00212 TRANSFAC - 42401162 42401179 1.0E-05 CCATAAAACCCTCGCCTC 18 V_SP4_03_M02810 TRANSFAC + 42401011 42401027 2.0E-06 TTCCCCGCCCCCTATTC 17 V_OLF1_01_M00261 TRANSFAC + 42399969 42399990 4.0E-06 GACGTGTCCCTGGGGAGGCGGA 22 V_MAZ_Q6_01_M02023 TRANSFAC + 42399259 42399272 0.0E+00 GGGGGAGGGGAGGG 14 V_STAT5A_02_M00460 TRANSFAC - 42399034 42399057 7.0E-06 TTCCTGGGATACCGCTTCTAAAGG 24 V_XBP1_02_M01770 TRANSFAC - 42399969 42399979 8.0E-06 AGGGACACGTC 11 V_GR_01_M00955 TRANSFAC - 42398477 42398503 3.0E-06 ACAAAAGGAACAAAGTGTTCTCAGCTC 27 V_AR_04_M01201 TRANSFAC - 42398483 42398497 0.0E+00 GGAACAAAGTGTTCT 15 V_HBP1_03_M02762 TRANSFAC - 42399128 42399143 5.0E-06 CTTTTCAATGGATATA 16 V_GR_Q6_M00192 TRANSFAC + 42398481 42398499 3.0E-06 TGAGAACACTTTGTTCCTT 19 V_GR_Q6_M00192 TRANSFAC - 42398481 42398499 0.0E+00 AAGGAACAAAGTGTTCTCA 19 V_STAT4_Q5_M02117 TRANSFAC + 42403543 42403552 5.0E-06 TTCTGAGAAA 10 V_TFIII_Q6_M00706 TRANSFAC - 42399461 42399469 6.0E-06 AGAGGGAGG 9 V_SP4_Q5_M01273 TRANSFAC + 42401012 42401022 9.0E-06 TCCCCGCCCCC 11 V_MTF1_06_M02882 TRANSFAC - 42400841 42400854 1.0E-05 ACAGAAAAAAAAAG 14 V_EOMES_04_M02851 TRANSFAC - 42398998 42399013 8.0E-06 TTTTAGGTGTCGCCAA 16 V_SP4_04_M02914 TRANSFAC - 42400944 42400958 2.0E-06 GAAAGGCGTGACAAT 15 V_PXR_Q2_M00964 TRANSFAC - 42399438 42399449 1.0E-06 AGGGTTAAGAAA 12 V_FPM315_01_M01587 TRANSFAC - 42399457 42399468 0.0E+00 GAGGGAGGAGGA 12 V_STAT1STAT1_Q3_M01212 TRANSFAC + 42398656 42398668 8.0E-06 GTTTCACATAACA 13 V_LMO2COM_02_M00278 TRANSFAC + 42399562 42399570 7.0E-06 CAGATAGGG 9 V_ZFP281_01_M01597 TRANSFAC + 42399258 42399268 7.0E-06 CGGGGGAGGGG 11 V_MEF3_B_M00319 TRANSFAC + 42398649 42398661 7.0E-06 GGCCCAGGTTTCA 13 V_LEF1TCF1_Q4_M00978 TRANSFAC + 42398488 42398498 9.0E-06 ACTTTGTTCCT 11 V_TCFAP2B_04_M02924 TRANSFAC - 42403529 42403543 9.0E-06 ATTGCATGTGGCAAT 15 V_STAT5A_01_M00457 TRANSFAC + 42403540 42403554 8.0E-06 CAATTCTGAGAAAAT 15 V_SRF_06_M02916 TRANSFAC - 42400838 42400854 3.0E-06 ACAGAAAAAAAAAGTGA 17 V_PUR1_Q4_M01721 TRANSFAC + 42400604 42400612 6.0E-06 GGGACAGTG 9 V_PR_02_M00957 TRANSFAC - 42398477 42398503 4.0E-06 ACAAAAGGAACAAAGTGTTCTCAGCTC 27 V_SP1_Q2_01_M00933 TRANSFAC + 42401013 42401022 4.0E-06 CCCCGCCCCC 10 V_UF1H3BETA_Q6_M01068 TRANSFAC + 42399256 42399269 0.0E+00 GGCGGGGGAGGGGA 14 V_TCF3_05_M02920 TRANSFAC - 42400842 42400856 8.0E-06 AGACAGAAAAAAAAA 15 V_SEF1_C_M00214 TRANSFAC + 42399583 42399601 7.0E-06 CGGCCGCCTGTCTGGGGTA 19 V_AR_01_M00481 TRANSFAC + 42398483 42398497 4.0E-06 AGAACACTTTGTTCC 15 V_AR_01_M00481 TRANSFAC - 42398483 42398497 0.0E+00 GGAACAAAGTGTTCT 15 V_NANOG_02_M01247 TRANSFAC - 42398492 42398511 7.0E-06 TGAGTGAAACAAAAGGAACA 20 V_OCT4_01_M01125 TRANSFAC + 42399134 42399148 2.0E-06 CATTGAAAAGTAAAT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.