Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

CX3CR1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
1524 chemokine (C-X3-C motif) receptor 1 chr3 -39321027 - 39328226 39321527

Transcription Factor Binding Sites

 
Download all TFBS in the CX3CR1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
Foxa2_MA0047.2 JASPAR - 39316777 39316788 2.0E-06 TGTTTACATTTC 12
IRF7_IRF_DBD_dimeric_14_1 SELEX - 39326175 39326188 0.0E+00 TAGAAAGTGAAAGT 14
FOXA1_MA0148.1 JASPAR - 39316778 39316788 1.0E-06 TGTTTACATTT 11
FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 39316779 39316790 0.0E+00 AATGTAAACAAA 12
IRX2_homeodomain_DBD_dimeric_12_1 SELEX + 39326025 39326036 8.0E-06 TGACATGACAAA 12
IRF8_IRF_full_dimeric_14_1 SELEX - 39326175 39326188 2.0E-06 TAGAAAGTGAAAGT 14
FOXL1_forkhead_full_dimeric_13_1 SELEX + 39316781 39316793 2.0E-06 TGTAAACAAACCT 13
FOXO3_MA0157.1 JASPAR + 39316781 39316788 7.0E-06 TGTAAACA 8
FOXC1_forkhead_DBD_monomeric_11_1 SELEX + 39316779 39316789 1.0E-06 AATGTAAACAA 11
FOXO1_forkhead_DBD_monomeric_8_1 SELEX + 39316782 39316789 7.0E-06 GTAAACAA 8
IRF1_MA0050.1 JASPAR - 39326175 39326186 1.0E-06 GAAAGTGAAAGT 12
ONECUT1_CUT_full_monomeric_14_1 SELEX + 39326050 39326063 5.0E-06 GAAAAATCAATCAA 14
Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 39316782 39316792 5.0E-06 GTAAACAAACC 11
ONECUT2_CUT_DBD_monomeric_14_1 SELEX + 39326050 39326063 1.0E-06 GAAAAATCAATCAA 14
FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 39316782 39316792 8.0E-06 GTAAACAAACC 11
MAFK_bZIP_DBD_dimeric_21_1 SELEX + 39321553 39321573 4.0E-06 TATTTGCAGAGTTAGCCAATA 21
MAFK_bZIP_DBD_dimeric_21_1 SELEX - 39321553 39321573 4.0E-06 TATTGGCTAACTCTGCAAATA 21
PBX1_MA0070.1 JASPAR + 39326053 39326064 0.0E+00 AAATCAATCAAT 12
Foxd3_MA0041.1 JASPAR + 39326195 39326206 7.0E-06 TATTATTTTTTC 12
IRF9_IRF_full_trimeric_15_1 SELEX - 39326175 39326189 7.0E-06 CTAGAAAGTGAAAGT 15
PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 39326173 39326187 0.0E+00 AGAAAGTGAAAGTAA 15
MAFG_bZIP_full_dimeric_21_1 SELEX + 39321553 39321573 4.0E-06 TATTTGCAGAGTTAGCCAATA 21
MAFG_bZIP_full_dimeric_21_1 SELEX - 39321553 39321573 4.0E-06 TATTGGCTAACTCTGCAAATA 21
DUXA_homeodomain_DBD_dimeric_13_1 SELEX + 39326051 39326063 9.0E-06 AAAAATCAATCAA 13
Pou5f1_MA0142.1 JASPAR + 39316773 39316787 1.0E-06 CTTTGAAATGTAAAC 15
IRF4_IRF_full_dimeric_15_1 SELEX - 39326174 39326188 8.0E-06 TAGAAAGTGAAAGTA 15
FOXB1_forkhead_full_monomeric_9_1 SELEX + 39316781 39316789 2.0E-06 TGTAAACAA 9
FOXO3_forkhead_full_monomeric_8_1 SELEX + 39316782 39316789 7.0E-06 GTAAACAA 8
Sox2_MA0143.1 JASPAR + 39316772 39316786 3.0E-06 TCTTTGAAATGTAAA 15
FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 39316780 39316792 2.0E-06 ATGTAAACAAACC 13
FOXB1_forkhead_DBD_monomeric_11_1 SELEX + 39316779 39316789 2.0E-06 AATGTAAACAA 11
Irx3_homeodomain_DBD_dimeric_12_1 SELEX + 39326025 39326036 1.0E-06 TGACATGACAAA 12
ONECUT3_CUT_DBD_monomeric_14_1 SELEX + 39326050 39326063 1.0E-06 GAAAAATCAATCAA 14
IRF2_MA0051.1 JASPAR - 39326170 39326187 1.0E-06 AGAAAGTGAAAGTAAAAA 18
IRX5_homeodomain_DBD_dimeric_12_1 SELEX + 39326025 39326036 9.0E-06 TGACATGACAAA 12
V_FOXP1_01_M00987 TRANSFAC + 39326160 39326179 5.0E-06 TTATATCTCTTTTTTACTTT 20
V_MEIS1_02_M01419 TRANSFAC - 39316718 39316733 1.0E-05 ATAAAGCTGACAAAAA 16
V_TCF3_01_M01594 TRANSFAC + 39316772 39316784 2.0E-06 TCTTTGAAATGTA 13
V_FOXO3_02_M02270 TRANSFAC + 39316781 39316788 7.0E-06 TGTAAACA 8
V_ATF5_01_M01295 TRANSFAC - 39321589 39321599 9.0E-06 AGTCTCCCTTA 11
V_FOXA2_04_M02749 TRANSFAC + 39316777 39316793 0.0E+00 GAAATGTAAACAAACCT 17
V_FOXD3_01_M00130 TRANSFAC + 39326195 39326206 4.0E-06 TATTATTTTTTC 12
V_AML3_Q6_M01856 TRANSFAC - 39318377 39318384 1.0E-05 AACCACAA 8
V_ETS_B_M00340 TRANSFAC - 39321577 39321590 3.0E-06 TACAGGAAACAAGA 14
V_FOXO4_02_M00476 TRANSFAC - 39316779 39316792 0.0E+00 GGTTTGTTTACATT 14
V_POU5F1_02_M02245 TRANSFAC + 39316773 39316787 1.0E-06 CTTTGAAATGTAAAC 15
V_HOXA13_02_M01297 TRANSFAC - 39321549 39321557 4.0E-06 AAATAAAAT 9
V_SATB1_Q3_M01723 TRANSFAC - 39326152 39326167 2.0E-06 AGATATAATGGACAAT 16
V_FOXJ2_02_M00423 TRANSFAC - 39326190 39326203 5.0E-06 AAAATAATACCTGA 14
V_IRF_Q6_01_M00972 TRANSFAC - 39326176 39326186 0.0E+00 GAAAGTGAAAG 11
V_IRF2_Q6_M01882 TRANSFAC - 39326173 39326188 0.0E+00 TAGAAAGTGAAAGTAA 16
V_FOXJ1_03_M02750 TRANSFAC + 39316779 39316794 0.0E+00 AATGTAAACAAACCTA 16
V_HFH4_01_M00742 TRANSFAC - 39316783 39316795 1.0E-06 TTAGGTTTGTTTA 13
V_NFAT2_01_M01748 TRANSFAC - 39326201 39326209 3.0E-06 ATGGAAAAA 9
V_TCFAP2E_04_M02926 TRANSFAC - 39326198 39326211 0.0E+00 AAATGGAAAAAATA 14
V_HOXC13_01_M01317 TRANSFAC - 39316725 39316740 6.0E-06 TTAGCTCATAAAGCTG 16
V_TGIF2_01_M01407 TRANSFAC - 39316718 39316733 1.0E-05 ATAAAGCTGACAAAAA 16
V_HNF6_Q6_M00639 TRANSFAC + 39326051 39326062 0.0E+00 AAAAATCAATCA 12
V_HELIOSA_02_M01004 TRANSFAC - 39326201 39326211 2.0E-06 AAATGGAAAAA 11
V_FREAC3_01_M00291 TRANSFAC + 39316777 39316792 1.0E-06 GAAATGTAAACAAACC 16
V_FOXO1_02_M00474 TRANSFAC - 39316779 39316792 0.0E+00 GGTTTGTTTACATT 14
V_NFAT_Q6_M00302 TRANSFAC - 39326200 39326211 4.0E-06 AAATGGAAAAAA 12
V_AML2_01_M01759 TRANSFAC - 39318377 39318384 1.0E-05 AACCACAA 8
V_IRF3_Q3_M01279 TRANSFAC + 39326167 39326179 2.0E-06 TCTTTTTTACTTT 13
V_IRF3_Q3_M01279 TRANSFAC + 39326173 39326185 0.0E+00 TTACTTTCACTTT 13
V_HNF3A_01_M01261 TRANSFAC + 39316780 39316789 1.0E-06 ATGTAAACAA 10
V_HNF3_Q6_M00791 TRANSFAC + 39316778 39316790 8.0E-06 AAATGTAAACAAA 13
V_IRF_Q6_M00772 TRANSFAC + 39326172 39326186 0.0E+00 TTTACTTTCACTTTC 15
V_PAX2_01_M00098 TRANSFAC + 39326185 39326203 5.0E-06 TCTAGTCAGGTATTATTTT 19
V_LEF1_03_M02878 TRANSFAC + 39326051 39326066 1.0E-06 AAAAATCAATCAATGG 16
V_MEF2_03_M00232 TRANSFAC - 39321593 39321614 6.0E-06 GCAGCATCTAAAGATAGTCTCC 22
V_NKX52_01_M01315 TRANSFAC + 39326052 39326068 2.0E-06 AAAATCAATCAATGGGT 17
V_CLOX_01_M00103 TRANSFAC - 39326049 39326063 8.0E-06 TTGATTGATTTTTCT 15
V_PBX1_01_M00096 TRANSFAC + 39326055 39326063 2.0E-06 ATCAATCAA 9
V_YY1_Q6_02_M01035 TRANSFAC + 39326202 39326212 7.0E-06 TTTTCCATTTT 11
V_OCT1_04_M00138 TRANSFAC - 39326195 39326217 4.0E-06 ATCTGAAAATGGAAAAAATAATA 23
V_STAT4_Q5_M02117 TRANSFAC - 39321582 39321591 4.0E-06 TTACAGGAAA 10
V_ISGF3G_03_M02771 TRANSFAC - 39326173 39326187 8.0E-06 AGAAAGTGAAAGTAA 15
V_OCT4_02_M01124 TRANSFAC + 39326177 39326191 7.0E-06 TTTCACTTTCTAGTC 15
V_BLIMP1_Q6_M01066 TRANSFAC - 39326173 39326188 0.0E+00 TAGAAAGTGAAAGTAA 16
V_ICSBP_Q6_M00699 TRANSFAC - 39326174 39326185 1.0E-06 AAAGTGAAAGTA 12
V_EVI1_06_M00011 TRANSFAC - 39321574 39321582 9.0E-06 ACAAGATAC 9
V_FREAC2_01_M00290 TRANSFAC + 39316777 39316792 0.0E+00 GAAATGTAAACAAACC 16
V_CIZ_01_M00734 TRANSFAC - 39326198 39326206 3.0E-06 GAAAAAATA 9
V_FOXL1_04_M02753 TRANSFAC + 39316777 39316793 0.0E+00 GAAATGTAAACAAACCT 17
V_PITX1_01_M01484 TRANSFAC - 39316689 39316705 6.0E-06 TCAAAAGGATTTACACA 17
V_GATA3_01_M00077 TRANSFAC + 39316798 39316806 1.0E-05 GAGATAGTG 9
V_TCF7L2_04_M02922 TRANSFAC + 39326051 39326066 3.0E-06 AAAAATCAATCAATGG 16
V_FOXO3_01_M00477 TRANSFAC - 39316779 39316792 0.0E+00 GGTTTGTTTACATT 14
V_FOXA2_03_M02260 TRANSFAC - 39316777 39316788 2.0E-06 TGTTTACATTTC 12
V_FOX_Q2_M00809 TRANSFAC - 39316783 39316795 6.0E-06 TTAGGTTTGTTTA 13
V_PBX1_02_M00124 TRANSFAC + 39326052 39326066 1.0E-06 AAAATCAATCAATGG 15
V_PBX1_03_M01017 TRANSFAC + 39326053 39326064 1.0E-06 AAATCAATCAAT 12
V_IRF1_Q6_01_M01881 TRANSFAC + 39326174 39326187 0.0E+00 TACTTTCACTTTCT 14
V_PBX_Q3_M00998 TRANSFAC - 39326050 39326061 1.0E-06 GATTGATTTTTC 12
V_SOX2_01_M02246 TRANSFAC + 39316772 39316786 3.0E-06 TCTTTGAAATGTAAA 15
V_SRF_06_M02916 TRANSFAC - 39326194 39326210 1.0E-05 AATGGAAAAAATAATAC 17
V_HFH3_01_M00289 TRANSFAC - 39316779 39316791 9.0E-06 GTTTGTTTACATT 13
V_FREAC4_01_M00292 TRANSFAC + 39316777 39316792 1.0E-06 GAAATGTAAACAAACC 16
V_FOXO4_01_M00472 TRANSFAC + 39316782 39316792 4.0E-06 GTAAACAAACC 11
V_HMX3_02_M01413 TRANSFAC + 39326052 39326068 7.0E-06 AAAATCAATCAATGGGT 17
V_PBX1_Q3_M02028 TRANSFAC + 39326055 39326063 2.0E-06 ATCAATCAA 9
V_TCF3_05_M02920 TRANSFAC - 39326196 39326210 3.0E-06 AATGGAAAAAATAAT 15
V_STAT1_Q6_M01823 TRANSFAC - 39321582 39321591 4.0E-06 TTACAGGAAA 10
V_FOXK1_03_M02752 TRANSFAC + 39316777 39316793 0.0E+00 GAAATGTAAACAAACCT 17
V_NANOG_02_M01247 TRANSFAC + 39326024 39326043 7.0E-06 GTGACATGACAAAAGTAGTC 20
V_OCT4_01_M01125 TRANSFAC + 39316773 39316787 0.0E+00 CTTTGAAATGTAAAC 15
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL