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CCDC13 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 152206 coiled-coil domain containing 13 chr3 - 42814245 - 42819745 42814745 Transcription Factor Binding Sites   Download all TFBS in the CCDC13 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints TBX21_TBX_full_dimeric_16_1 SELEX + 42812970 42812985 2.0E-06 GGTGTGATGACTCACA 16 TBX21_TBX_full_dimeric_16_1 SELEX - 42812970 42812985 5.0E-06 TGTGAGTCATCACACC 16 MYF6_bHLH_full_dimeric_10_1 SELEX + 42818530 42818539 6.0E-06 AACAAGTGTT 10 Zfp652_C2H2_DBD_monomeric_13_1 SELEX - 42817449 42817461 2.0E-06 GTAAATGGTTAAA 13 LHX6_homeodomain_full_dimeric_16_1 SELEX - 42817488 42817503 5.0E-06 TAATTGCTCCTAACTG 16 PDX1_homeodomain_DBD_dimeric_18_1 SELEX + 42817487 42817504 4.0E-06 CCAGTTAGGAGCAATTAT 18 RFX4_RFX_DBD_dimeric_16_1 SELEX - 42814752 42814767 7.0E-06 TGTTTCCCTGGTGACG 16 TBX5_TBX_DBD_dimeric_20_1 SELEX + 42812969 42812988 0.0E+00 AGGTGTGATGACTCACACCT 20 TBX5_TBX_DBD_dimeric_20_1 SELEX - 42812969 42812988 0.0E+00 AGGTGTGAGTCATCACACCT 20 SRY_HMG_DBD_dimeric_16_1 SELEX + 42818524 42818539 8.0E-06 GAAAATAACAAGTGTT 16 GRHL1_CP2_full_dimeric_12_1 SELEX + 42817637 42817648 4.0E-06 CAAACCTGTTTT 12 GRHL1_CP2_full_dimeric_12_1 SELEX - 42817637 42817648 1.0E-06 AAAACAGGTTTG 12 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 42814918 42814929 8.0E-06 TTTAAAAATATA 12 SPIB_ETS_DBD_monomeric_14_1 SELEX + 42814268 42814281 5.0E-06 GAGATGCGGAAGTG 14 BARHL2_homeodomain_full_dimeric_16_1 SELEX - 42817488 42817503 1.0E-06 TAATTGCTCCTAACTG 16 NFKB2_NFAT_DBD_dimeric_13_1 SELEX + 42814207 42814219 5.0E-06 AGGGGAACTCCCT 13 NFKB2_NFAT_DBD_dimeric_13_1 SELEX - 42814207 42814219 5.0E-06 AGGGAGTTCCCCT 13 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX - 42817488 42817503 2.0E-06 TAATTGCTCCTAACTG 16 Foxq1_MA0040.1 JASPAR - 42817516 42817526 2.0E-06 GAATGTTTATA 11 TCF4_bHLH_full_dimeric_10_1 SELEX + 42812982 42812991 3.0E-06 CACACCTGTA 10 FOXO4_forkhead_DBD_putatively-multimeric_12_1 SELEX - 42815058 42815069 0.0E+00 TTTCCCCACACT 12 MGA_TBX_DBD_dimeric_18_2 SELEX + 42812970 42812987 0.0E+00 GGTGTGATGACTCACACC 18 MGA_TBX_DBD_dimeric_18_2 SELEX - 42812970 42812987 0.0E+00 GGTGTGAGTCATCACACC 18 TBX4_TBX_DBD_dimeric_20_1 SELEX + 42812969 42812988 0.0E+00 AGGTGTGATGACTCACACCT 20 TBX4_TBX_DBD_dimeric_20_1 SELEX - 42812969 42812988 0.0E+00 AGGTGTGAGTCATCACACCT 20 SOX7_HMG_full_dimeric_16_1 SELEX + 42818524 42818539 3.0E-06 GAAAATAACAAGTGTT 16 NFKB1_NFAT_DBD_dimeric_13_1 SELEX + 42814207 42814219 5.0E-06 AGGGGAACTCCCT 13 NFKB1_NFAT_DBD_dimeric_13_1 SELEX - 42814207 42814219 6.0E-06 AGGGAGTTCCCCT 13 RFX5_RFX_DBD_dimeric_16_3 SELEX + 42814737 42814752 8.0E-06 CGCTGCCCTGGCAACC 16 MGA_TBX_DBD_dimeric_18_1 SELEX + 42812971 42812988 1.0E-05 GTGTGATGACTCACACCT 18 TBX2_TBX_full_dimeric_18_1 SELEX + 42812970 42812987 0.0E+00 GGTGTGATGACTCACACC 18 TBX2_TBX_full_dimeric_18_1 SELEX - 42812970 42812987 0.0E+00 GGTGTGAGTCATCACACC 18 JDP2_bZIP_full_dimeric_9_1 SELEX + 42812976 42812984 7.0E-06 ATGACTCAC 9 TEAD1_TEA_full_dimeric_17_1 SELEX - 42818543 42818559 5.0E-06 AAATTCTTCACATCCTG 17 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX - 42815059 42815069 0.0E+00 TTTCCCCACAC 11 GRHL1_CP2_DBD_dimeric_10_1 SELEX + 42817638 42817647 7.0E-06 AAACCTGTTT 10 GRHL1_CP2_DBD_dimeric_10_1 SELEX - 42817638 42817647 8.0E-06 AAACAGGTTT 10 SPI1_ETS_full_monomeric_14_1 SELEX + 42814268 42814281 9.0E-06 GAGATGCGGAAGTG 14 FOXO6_forkhead_DBD_putatively-multimeric_14_1 SELEX - 42815056 42815069 3.0E-06 TTTCCCCACACTGT 14 FOXO1_forkhead_DBD_putatively-multimeric_12_1 SELEX - 42815058 42815069 0.0E+00 TTTCCCCACACT 12 NHLH1_bHLH_full_dimeric_10_1 SELEX - 42814610 42814619 9.0E-06 CGCAGCTGCC 10 TBX1_TBX_DBD_dimeric_20_1 SELEX - 42812981 42813000 2.0E-06 TGTTGAGATTACAGGTGTGA 20 Zfx_MA0146.1 JASPAR + 42814241 42814254 7.0E-06 GGGGGCTGGGCCTG 14 V_STAT5A_Q6_M01890 TRANSFAC - 42817676 42817688 5.0E-06 ACATTTCTGGTAA 13 V_DBX1_01_M01483 TRANSFAC + 42814915 42814931 7.0E-06 GAGTATATTTTTAAAAA 17 V_NFKB_Q6_01_M00774 TRANSFAC + 42814204 42814219 7.0E-06 TGGAGGGGAACTCCCT 16 V_BACH2_01_M00490 TRANSFAC - 42812975 42812985 4.0E-06 TGTGAGTCATC 11 V_ATF5_01_M01295 TRANSFAC + 42814683 42814693 6.0E-06 CTTCTCCCTTC 11 V_CEBP_Q3_M00770 TRANSFAC - 42817632 42817643 7.0E-06 AGGTTTGGCAAT 12 V_HMGIY_Q3_M01010 TRANSFAC - 42817625 42817639 1.0E-05 TTGGCAATTTCTTCT 15 V_EVI1_04_M00081 TRANSFAC + 42815034 42815048 4.0E-06 AGATATATTTGAAAA 15 V_BCL6_01_M01183 TRANSFAC + 42814922 42814937 0.0E+00 TTTTTAAAAAAGTTTT 16 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC - 42814912 42814923 4.0E-06 AATATACTCCAG 12 V_STAT_Q6_M00777 TRANSFAC - 42817677 42817689 8.0E-06 AACATTTCTGGTA 13 V_TBR2_01_M01774 TRANSFAC + 42812969 42812977 6.0E-06 AGGTGTGAT 9 V_CEBP_C_M00201 TRANSFAC + 42814823 42814840 6.0E-06 AGAGTTCTGAAAGTGACA 18 V_NFAT3_Q3_M01734 TRANSFAC - 42814451 42814460 1.0E-05 TTATTTTCCA 10 V_CEBP_Q2_M00190 TRANSFAC - 42812946 42812959 9.0E-06 TCATTGCTTAAGGT 14 V_RFX4_03_M02789 TRANSFAC + 42814740 42814754 7.0E-06 TGCCCTGGCAACCGT 15 V_P50RELAP65_Q5_01_M01224 TRANSFAC - 42814206 42814217 9.0E-06 GGAGTTCCCCTC 12 V_AP4_Q6_02_M01860 TRANSFAC + 42814611 42814623 1.0E-05 GCAGCTGCGGGCT 13 V_PU1_Q4_M01172 TRANSFAC - 42814254 42814272 4.0E-06 ATCTCCCAGTTCCCCTTCC 19 V_PU1_Q4_M01172 TRANSFAC + 42814675 42814693 6.0E-06 TCTCTCCACTTCTCCCTTC 19 V_NFAT2_01_M01748 TRANSFAC + 42814450 42814458 2.0E-06 ATGGAAAAT 9 V_BRN2_01_M00145 TRANSFAC + 42814447 42814462 1.0E-06 TGCATGGAAAATAAGC 16 V_CDX_Q5_M00991 TRANSFAC - 42814902 42814919 7.0E-06 TACTCCAGAAGATTTAAA 18 V_CEBPB_01_M00109 TRANSFAC - 42817630 42817643 7.0E-06 AGGTTTGGCAATTT 14 V_MEF2A_Q6_M02024 TRANSFAC + 42814920 42814929 1.0E-06 TATTTTTAAA 10 V_AP1_Q6_M00174 TRANSFAC + 42812975 42812985 1.0E-05 GATGACTCACA 11 V_ELF4_04_M02850 TRANSFAC - 42814914 42814930 5.0E-06 TTTTAAAAATATACTCC 17 V_ELF4_04_M02850 TRANSFAC - 42814915 42814931 2.0E-06 TTTTTAAAAATATACTC 17 V_BACH1_01_M00495 TRANSFAC - 42812973 42812987 7.0E-06 GGTGTGAGTCATCAC 15 V_FOXA2_02_M02853 TRANSFAC + 42818524 42818538 0.0E+00 GAAAATAACAAGTGT 15 V_CEBPE_Q6_M01868 TRANSFAC + 42817628 42817641 3.0E-06 AGAAATTGCCAAAC 14 V_TEF_Q6_M00672 TRANSFAC - 42817446 42817457 4.0E-06 ATGGTTAAACAA 12 V_TEF_Q6_M00672 TRANSFAC - 42817539 42817550 2.0E-06 ATGTTCACACAA 12 V_SOX8_04_M02912 TRANSFAC + 42817521 42817534 2.0E-06 ACATTCATGTATAG 14 V_RSRFC4_Q2_M00407 TRANSFAC - 42814915 42814931 8.0E-06 TTTTTAAAAATATACTC 17 V_MEF2_03_M00232 TRANSFAC - 42814914 42814935 3.0E-06 AACTTTTTTAAAAATATACTCC 22 V_JUNDM2_04_M02876 TRANSFAC + 42812972 42812987 1.0E-06 TGTGATGACTCACACC 16 V_JUNDM2_04_M02876 TRANSFAC - 42812973 42812988 4.0E-06 AGGTGTGAGTCATCAC 16 V_MEF2_04_M00233 TRANSFAC - 42817612 42817633 8.0E-06 ATTTCTTCTAAAACTAGATATG 22 V_AP1_01_M00517 TRANSFAC - 42812974 42812986 2.0E-06 GTGTGAGTCATCA 13 V_TBP_06_M02814 TRANSFAC - 42814918 42814933 1.0E-06 CTTTTTTAAAAATATA 16 V_TBP_06_M02814 TRANSFAC - 42814920 42814935 5.0E-06 AACTTTTTTAAAAATA 16 V_SOX17_04_M02904 TRANSFAC + 42817517 42817533 1.0E-06 ATAAACATTCATGTATA 17 V_AP1_Q4_01_M00926 TRANSFAC - 42812976 42812983 1.0E-05 TGAGTCAT 8 V_MTF1_06_M02882 TRANSFAC + 42815038 42815051 1.0E-06 ATATTTGAAAAATG 14 V_GABPBETA_Q3_M01876 TRANSFAC - 42814642 42814652 8.0E-06 AGCGGAAGGGC 11 V_CREBP1_Q2_M00179 TRANSFAC - 42814768 42814779 8.0E-06 AGTGACGTCGCT 12 V_CEBPA_01_M00116 TRANSFAC + 42817630 42817643 2.0E-06 AAATTGCCAAACCT 14 V_AREB6_02_M00413 TRANSFAC + 42812981 42812992 6.0E-06 TCACACCTGTAA 12 V_OCT1_Q6_M00195 TRANSFAC + 42815045 42815059 7.0E-06 AAAAATGTAAAACAG 15 V_TCF7_04_M02921 TRANSFAC - 42814919 42814933 1.0E-06 CTTTTTTAAAAATAT 15 V_FRA1_Q5_M01267 TRANSFAC - 42812976 42812983 1.0E-05 TGAGTCAT 8 V_TCF4_Q5_M00671 TRANSFAC - 42814498 42814505 1.0E-05 CCTTTGAA 8 V_ASCL2_04_M02841 TRANSFAC - 42815055 42815070 4.0E-06 CTTTCCCCACACTGTT 16 V_PLZF_02_M01075 TRANSFAC - 42817609 42817637 3.0E-06 GGCAATTTCTTCTAAAACTAGATATGCAG 29 V_TBX5_Q5_M01044 TRANSFAC - 42812968 42812977 6.0E-06 ATCACACCTG 10 V_TBX5_Q5_M01044 TRANSFAC + 42812980 42812989 3.0E-06 CTCACACCTG 10 V_TBX22_01_M01195 TRANSFAC + 42814373 42814391 9.0E-06 AGTTCTGACTGTGCCATCT 19 V_MYF6_03_M02781 TRANSFAC + 42818526 42818541 2.0E-06 AAATAACAAGTGTTTG 16 V_EFC_Q6_M00626 TRANSFAC + 42814752 42814765 1.0E-06 CGTCACCAGGGAAA 14 V_EFC_Q6_M00626 TRANSFAC - 42817646 42817659 5.0E-06 AGTCACTCTGGAAA 14 V_NFE2_01_M00037 TRANSFAC + 42812974 42812984 8.0E-06 TGATGACTCAC 11 V_MEF2_01_M00006 TRANSFAC - 42814915 42814930 4.0E-06 TTTTAAAAATATACTC 16 V_ZFP128_04_M02932 TRANSFAC + 42814916 42814929 1.0E-06 AGTATATTTTTAAA 14 V_ZFP128_04_M02932 TRANSFAC - 42814916 42814929 3.0E-06 TTTAAAAATATACT 14 V_LTF_Q6_M01692 TRANSFAC + 42814774 42814782 1.0E-05 GTCACTTGC 9 V_GLIS2_04_M02863 TRANSFAC + 42814918 42814931 1.0E-06 TATATTTTTAAAAA 14 V_GLIS2_04_M02863 TRANSFAC + 42814921 42814934 7.0E-06 ATTTTTAAAAAAGT 14 V_SOX9_Q4_M01284 TRANSFAC + 42814497 42814507 8.0E-06 ATTCAAAGGAC 11 V_CEBPA_Q6_M01866 TRANSFAC - 42817631 42817643 7.0E-06 AGGTTTGGCAATT 13

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.