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C3orf55 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 152078 chromosome 3 open reading frame 55 chr3 + 157256132 - 157261632 157261132 Transcription Factor Binding Sites   Download all TFBS in the C3orf55 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR + 157260600 157260618 5.0E-06 TCACCTGCAGGGGTCACTG 19 Pax6_MA0069.1 JASPAR + 157263802 157263815 2.0E-06 TTTACTCTTGAGTT 14 THRA_nuclearreceptor_FL_dimeric_18_1 SELEX + 157261651 157261668 5.0E-06 GTGACCTCATAAGAGCAT 18 THRA_nuclearreceptor_FL_dimeric_18_1 SELEX - 157261651 157261668 2.0E-06 ATGCTCTTATGAGGTCAC 18 Arx_homeodomain_DBD_dimeric_13_1 SELEX + 157262605 157262617 3.0E-06 AAAATTAAGTTAA 13 TBP_MA0108.2 JASPAR - 157263106 157263120 6.0E-06 GTATAAAAATCACAA 15 Alx1_homeodomain_DBD_dimeric_13_1 SELEX + 157262605 157262617 6.0E-06 AAAATTAAGTTAA 13 Alx1_homeodomain_DBD_dimeric_13_1 SELEX - 157262605 157262617 7.0E-06 TTAACTTAATTTT 13 RARA_nuclearreceptor_DBD_dimeric_18_2 SELEX - 157261690 157261707 4.0E-06 AAGATCATAAGGCCACGG 18 ISX_homeodomain_DBD_dimeric_13_1 SELEX - 157262605 157262617 6.0E-06 TTAACTTAATTTT 13 Klf4_MA0039.2 JASPAR + 157261077 157261086 5.0E-06 TGGGTGGGGC 10 THRB_nuclearreceptor_DBD_dimeric_18_1 SELEX + 157261651 157261668 3.0E-06 GTGACCTCATAAGAGCAT 18 THRB_nuclearreceptor_DBD_dimeric_18_1 SELEX - 157261651 157261668 5.0E-06 ATGCTCTTATGAGGTCAC 18 PROP1_homeodomain_full_dimeric_11_1 SELEX - 157262606 157262616 1.0E-05 TAACTTAATTT 11 MEF2A_MA0052.1 JASPAR + 157262628 157262637 7.0E-06 TTATTTTTAA 10 ALX3_homeodomain_full_dimeric_13_1 SELEX + 157262605 157262617 8.0E-06 AAAATTAAGTTAA 13 ALX3_homeodomain_full_dimeric_13_1 SELEX - 157262605 157262617 7.0E-06 TTAACTTAATTTT 13 Ascl2_bHLH_DBD_dimeric_10_1 SELEX - 157260873 157260882 5.0E-06 AACAGCTGCC 10 Creb3l2_bZIP_DBD_dimeric_13_1 SELEX - 157262732 157262744 8.0E-06 TGCCAAGTCATCT 13 DRGX_homeodomain_DBD_dimeric_13_1 SELEX - 157262605 157262617 4.0E-06 TTAACTTAATTTT 13 PHOX2B_homeodomain_full_dimeric_11_1 SELEX - 157262606 157262616 3.0E-06 TAACTTAATTT 11 Alx4_homeodomain_DBD_dimeric_13_1 SELEX + 157262605 157262617 5.0E-06 AAAATTAAGTTAA 13 PRRX1_homeodomain_full_dimeric_11_1 SELEX - 157262606 157262616 4.0E-06 TAACTTAATTT 11 CART1_homeodomain_DBD_dimeric_13_1 SELEX - 157262605 157262617 2.0E-06 TTAACTTAATTTT 13 Foxd3_MA0041.1 JASPAR + 157262803 157262814 7.0E-06 GATTTTTTTTTT 12 Uncx_homeodomain_DBD_dimeric_13_1 SELEX - 157262605 157262617 3.0E-06 TTAACTTAATTTT 13 Pou5f1_MA0142.1 JASPAR - 157262463 157262477 2.0E-06 CTTTATGATGCAGAG 15 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX + 157262640 157262650 2.0E-06 TTTCCTCACAC 11 PHOX2A_homeodomain_DBD_dimeric_11_1 SELEX - 157262606 157262616 3.0E-06 TAACTTAATTT 11 IRF3_IRF_full_trimeric_21_1 SELEX - 157261231 157261251 1.0E-05 AGGAAACTGAAGGAGAAACCC 21 FOXO1_forkhead_DBD_putatively-multimeric_12_1 SELEX + 157262640 157262651 9.0E-06 TTTCCTCACACA 12 RARG_nuclearreceptor_full_dimeric_16_1 SELEX - 157261692 157261707 6.0E-06 AAGATCATAAGGCCAC 16 MSC_bHLH_full_dimeric_10_1 SELEX + 157261155 157261164 6.0E-06 AACAGCTTTT 10 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 157262805 157262817 6.0E-06 AAAAAAAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 157262806 157262818 6.0E-06 AAAAAAAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 157262807 157262819 6.0E-06 AAAAAAAAAAAAA 13 Irx3_homeodomain_DBD_dimeric_12_1 SELEX - 157262783 157262794 5.0E-06 GAACATGAAAAA 12 Irx3_homeodomain_DBD_dimeric_12_1 SELEX + 157263141 157263152 1.0E-05 TTACATATCATA 12 V_FOXP1_01_M00987 TRANSFAC + 157262799 157262818 1.0E-06 TTATGATTTTTTTTTTTTTT 20 V_FOXP1_01_M00987 TRANSFAC + 157262802 157262821 4.0E-06 TGATTTTTTTTTTTTTTTGA 20 V_FOXA2_04_M02749 TRANSFAC + 157262608 157262624 7.0E-06 ATTAAGTTAACAAAGCT 17 V_HNF1_02_M01379 TRANSFAC - 157262607 157262623 1.0E-06 GCTTTGTTAACTTAATT 17 V_HMGIY_Q3_M01010 TRANSFAC + 157262799 157262813 7.0E-06 TTATGATTTTTTTTT 15 V_HMGIY_Q3_M01010 TRANSFAC + 157262804 157262818 1.0E-05 ATTTTTTTTTTTTTT 15 V_EVI1_04_M00081 TRANSFAC - 157262805 157262819 6.0E-06 AAAAAAAAAAAAAAA 15 V_FOXD3_01_M00130 TRANSFAC + 157262803 157262814 8.0E-06 GATTTTTTTTTT 12 V_NKX29_01_M01352 TRANSFAC - 157262470 157262486 8.0E-06 TCTTGAGCACTTTATGA 17 V_BCL6_01_M01183 TRANSFAC + 157262800 157262815 3.0E-06 TATGATTTTTTTTTTT 16 V_BCL6_01_M01183 TRANSFAC + 157262804 157262819 6.0E-06 ATTTTTTTTTTTTTTT 16 V_MMEF2_Q6_M00405 TRANSFAC - 157263107 157263122 6.0E-06 GAGTATAAAAATCACA 16 V_POU5F1_02_M02245 TRANSFAC - 157262463 157262477 2.0E-06 CTTTATGATGCAGAG 15 V_NFAT3_Q3_M01734 TRANSFAC + 157262636 157262645 1.0E-05 AAGTTTTCCT 10 V_AFP1_Q6_M00616 TRANSFAC - 157262625 157262635 9.0E-06 AAAAATAAGAC 11 V_SP1_02_M01303 TRANSFAC - 157261130 157261140 8.0E-06 GGGGCGGGGAC 11 V_AP4_Q6_01_M00927 TRANSFAC - 157260874 157260882 1.0E-05 AACAGCTGC 9 V_ZFP691_03_M02833 TRANSFAC + 157262471 157262487 3.0E-06 CATAAAGTGCTCAAGAA 17 V_TCFAP2E_04_M02926 TRANSFAC - 157262780 157262793 0.0E+00 AACATGAAAAAAAT 14 V_TCFAP2E_04_M02926 TRANSFAC - 157262803 157262816 9.0E-06 AAAAAAAAAAAATC 14 V_TCFAP2E_04_M02926 TRANSFAC - 157262804 157262817 3.0E-06 AAAAAAAAAAAAAT 14 V_TCFAP2E_04_M02926 TRANSFAC - 157262805 157262818 1.0E-06 AAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 157262806 157262819 1.0E-06 AAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 157262807 157262820 2.0E-06 CAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 157262808 157262821 3.0E-06 TCAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 157262809 157262822 2.0E-06 CTCAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 157262811 157262824 2.0E-06 GTCTCAAAAAAAAA 14 V_CDX_Q5_M00991 TRANSFAC - 157262798 157262815 4.0E-06 AAAAAAAAAAATCATAAG 18 V_CEBPB_01_M00109 TRANSFAC - 157262651 157262664 3.0E-06 GCATTAAGAAATGT 14 V_MEF2A_Q6_M02024 TRANSFAC + 157262629 157262638 9.0E-06 TATTTTTAAG 10 V_ELF4_04_M02850 TRANSFAC - 157262802 157262818 7.0E-06 AAAAAAAAAAAAAATCA 17 V_ELF4_04_M02850 TRANSFAC - 157262803 157262819 3.0E-06 AAAAAAAAAAAAAAATC 17 V_ELF4_04_M02850 TRANSFAC - 157262804 157262820 8.0E-06 CAAAAAAAAAAAAAAAT 17 V_ELF4_04_M02850 TRANSFAC - 157262805 157262821 2.0E-06 TCAAAAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC - 157262806 157262822 3.0E-06 CTCAAAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC - 157262807 157262823 0.0E+00 TCTCAAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC - 157262808 157262824 1.0E-06 GTCTCAAAAAAAAAAAA 17 V_POU3F2_01_M00463 TRANSFAC + 157262649 157262662 9.0E-06 ACACATTTCTTAAT 14 V_ZFP105_03_M02827 TRANSFAC - 157262801 157262815 8.0E-06 AAAAAAAAAAATCAT 15 V_ZFP105_03_M02827 TRANSFAC - 157262802 157262816 1.0E-06 AAAAAAAAAAAATCA 15 V_ZFP105_03_M02827 TRANSFAC - 157262803 157262817 5.0E-06 AAAAAAAAAAAAATC 15 V_ZFP105_03_M02827 TRANSFAC - 157262804 157262818 0.0E+00 AAAAAAAAAAAAAAT 15 V_ZFP105_03_M02827 TRANSFAC - 157262805 157262819 0.0E+00 AAAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC - 157262806 157262820 1.0E-06 CAAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC - 157262807 157262821 2.0E-06 TCAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC - 157262808 157262822 1.0E-06 CTCAAAAAAAAAAAA 15 V_RXRA_03_M02791 TRANSFAC + 157261647 157261663 4.0E-06 TTGTGTGACCTCATAAG 17 V_POLY_C_M00212 TRANSFAC + 157261301 157261318 4.0E-06 TAGTAAACTGCCCCTGTG 18 V_TATA_01_M00252 TRANSFAC - 157263106 157263120 6.0E-06 GTATAAAAATCACAA 15 V_MRF2_01_M00454 TRANSFAC + 157262522 157262535 1.0E-06 CTTCACAATACTAA 14 V_AMEF2_Q6_M00403 TRANSFAC - 157263105 157263122 1.0E-06 GAGTATAAAAATCACAAA 18 V_ARID3A_02_M02839 TRANSFAC + 157263141 157263155 0.0E+00 TTACATATCATATAT 15 V_MAZ_Q6_01_M02023 TRANSFAC - 157261681 157261694 4.0E-06 CACGGAGGGGAGGG 14 V_HNF1_Q6_01_M01011 TRANSFAC + 157262597 157262617 1.0E-06 CAGGGGTAAAAATTAAGTTAA 21 V_ASCL2_03_M02737 TRANSFAC - 157262750 157262766 9.0E-06 TCTCACAGCTGCTTCTG 17 V_MEF2_04_M00233 TRANSFAC - 157262808 157262829 6.0E-06 ACTTTGTCTCAAAAAAAAAAAA 22 V_ERALPHA_01_M01801 TRANSFAC - 157262871 157262885 2.0E-06 AGGTTGCAGTGAGCT 15 V_MEF2_Q6_01_M00941 TRANSFAC + 157262626 157262637 2.0E-06 TCTTATTTTTAA 12 V_CTCF_01_M01200 TRANSFAC + 157260599 157260618 6.0E-06 GTCACCTGCAGGGGTCACTG 20 V_NKX23_01_M01457 TRANSFAC - 157262471 157262486 1.0E-06 TCTTGAGCACTTTATG 16 V_PTF1BETA_Q6_M00657 TRANSFAC - 157261226 157261239 0.0E+00 GAGAAACCCACAGC 14 V_ALPHACP1_01_M00687 TRANSFAC - 157261252 157261262 1.0E-05 CAGGCAATGAG 11 V_MTF1_06_M02882 TRANSFAC - 157262803 157262816 2.0E-06 AAAAAAAAAAAATC 14 V_MTF1_06_M02882 TRANSFAC - 157262805 157262818 1.0E-06 AAAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC - 157262806 157262819 1.0E-06 AAAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC - 157262807 157262820 8.0E-06 CAAAAAAAAAAAAA 14 V_FAC1_01_M00456 TRANSFAC - 157262805 157262818 3.0E-06 AAAAAAAAAAAAAA 14 V_FAC1_01_M00456 TRANSFAC - 157262806 157262819 3.0E-06 AAAAAAAAAAAAAA 14 V_PXR_Q2_M00964 TRANSFAC + 157261296 157261307 2.0E-06 GAGGTTAGTAAA 12 V_ESRRA_04_M02852 TRANSFAC + 157260604 157260620 5.0E-06 CTGCAGGGGTCACTGTT 17 V_TCF1_06_M02815 TRANSFAC - 157262607 157262623 2.0E-06 GCTTTGTTAACTTAATT 17 V_TCF1_06_M02815 TRANSFAC + 157262608 157262624 2.0E-06 ATTAAGTTAACAAAGCT 17 V_HNF1B_01_M01425 TRANSFAC - 157262606 157262622 4.0E-06 CTTTGTTAACTTAATTT 17 V_FOXO3_01_M00477 TRANSFAC - 157262610 157262623 9.0E-06 GCTTTGTTAACTTA 14 V_P53_04_M01652 TRANSFAC + 157260832 157260851 1.0E-05 GGACAAGGCTGGACAGGACC 20 V_P53_04_M01652 TRANSFAC - 157260832 157260851 4.0E-06 GGTCCTGTCCAGCCTTGTCC 20 V_TITF1_Q3_M00432 TRANSFAC - 157263805 157263814 7.0E-06 ACTCAAGAGT 10 V_LXRA_RXRA_Q3_M00647 TRANSFAC + 157261293 157261307 3.0E-06 CTTGAGGTTAGTAAA 15 V_SRF_06_M02916 TRANSFAC - 157262799 157262815 3.0E-06 AAAAAAAAAAATCATAA 17 V_SRF_06_M02916 TRANSFAC - 157262800 157262816 2.0E-06 AAAAAAAAAAAATCATA 17 V_SRF_06_M02916 TRANSFAC - 157262801 157262817 2.0E-06 AAAAAAAAAAAAATCAT 17 V_SRF_06_M02916 TRANSFAC - 157262802 157262818 0.0E+00 AAAAAAAAAAAAAATCA 17 V_SRF_06_M02916 TRANSFAC - 157262803 157262819 0.0E+00 AAAAAAAAAAAAAAATC 17 V_SRF_06_M02916 TRANSFAC - 157262804 157262820 0.0E+00 CAAAAAAAAAAAAAAAT 17 V_SRF_06_M02916 TRANSFAC - 157262805 157262821 0.0E+00 TCAAAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 157262806 157262822 0.0E+00 CTCAAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 157262807 157262823 0.0E+00 TCTCAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 157262808 157262824 2.0E-06 GTCTCAAAAAAAAAAAA 17 V_PAX4_02_M00377 TRANSFAC + 157262603 157262613 7.0E-06 TAAAAATTAAG 11 V_MEF2A_05_M01301 TRANSFAC + 157262626 157262637 2.0E-06 TCTTATTTTTAA 12 V_HNF4_01_M00134 TRANSFAC + 157262596 157262614 9.0E-06 ACAGGGGTAAAAATTAAGT 19 V_HNF4_01_M00134 TRANSFAC - 157263794 157263812 5.0E-06 TCAAGAGTAAAATTCAATT 19 V_TCF3_05_M02920 TRANSFAC - 157262804 157262818 9.0E-06 AAAAAAAAAAAAAAT 15 V_TCF3_05_M02920 TRANSFAC - 157262809 157262823 4.0E-06 TCTCAAAAAAAAAAA 15 V_STAT1_05_M01260 TRANSFAC + 157260819 157260840 8.0E-06 GTTTTCAAAGAAGGGACAAGGC 22 V_PAX4_04_M00380 TRANSFAC - 157262758 157262787 6.0E-06 AAAAAAATGTGAGTTACCACATCTCACAGC 30 V_DMRT5_01_M01150 TRANSFAC - 157263134 157263148 4.0E-06 ATATGTAACTTTATC 15 V_PAX6_01_M00097 TRANSFAC + 157263798 157263818 0.0E+00 GAATTTTACTCTTGAGTTCCC 21 V_NANOG_02_M01247 TRANSFAC - 157262802 157262821 5.0E-06 TCAAAAAAAAAAAAAAATCA 20 V_OCT4_01_M01125 TRANSFAC - 157262463 157262477 9.0E-06 CTTTATGATGCAGAG 15

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