Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

RNF38 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 152006 ring finger protein 38 chr9 - 36399796 - 36406195 36400296 Transcription Factor Binding Sites   Download all TFBS in the RNF38 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 36402015 36402032 2.0E-06 ATGGTAATTATTTATGTA 18 FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 36402015 36402032 3.0E-06 TACATAAATAATTACCAT 18 POU4F2_POU_full_monomeric_16_1 SELEX - 36402018 36402033 1.0E-06 GTACATAAATAATTAC 16 HOXD12_homeodomain_DBD_monomeric_9_1 SELEX - 36401481 36401489 4.0E-06 GCAATAAAA 9 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX - 36397278 36397290 7.0E-06 AAAAATAAAAAAA 13 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX - 36401480 36401489 1.0E-06 GCAATAAAAA 10 SP3_C2H2_DBD_monomeric_11_1 SELEX + 36400886 36400896 1.0E-05 GCCACGCCCCT 11 Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX - 36401480 36401489 0.0E+00 GCAATAAAAA 10 ESRRA_nuclearreceptor_DBD_dimeric_19_1 SELEX - 36402737 36402755 6.0E-06 AAAGGTTGGCTGAAGCTCA 19 DLX1_homeodomain_DBD_monomeric_10_1 SELEX - 36402017 36402026 6.0E-06 AATAATTACC 10 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 36400886 36400896 7.0E-06 GCCACGCCCCT 11 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 36401195 36401205 1.0E-05 GCCCCGCCCCC 11 EMX2_homeodomain_DBD_dimeric_14_1 SELEX - 36397275 36397288 8.0E-06 AAATAAAAAAATTA 14 EVX1_homeodomain_DBD_monomeric_10_1 SELEX - 36402017 36402026 7.0E-06 AATAATTACC 10 FOXF2_MA0030.1 JASPAR - 36399089 36399102 3.0E-06 GAAGAGTAAACAAG 14 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 36397282 36397293 0.0E+00 ACTAAAAATAAA 12 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 36399089 36399100 1.0E-05 AGAGTAAACAAG 12 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 36402021 36402032 4.0E-06 TACATAAATAAT 12 POU3F2_POU_DBD_monomeric_13_1 SELEX - 36402022 36402034 6.0E-06 TGTACATAAATAA 13 KLF14_C2H2_DBD_monomeric_14_1 SELEX + 36400885 36400898 3.0E-06 GGCCACGCCCCTCC 14 FOXL1_forkhead_full_dimeric_13_1 SELEX - 36397279 36397291 3.0E-06 TAAAAATAAAAAA 13 FOXL1_forkhead_full_dimeric_13_1 SELEX - 36402022 36402034 1.0E-06 TGTACATAAATAA 13 POU5F1P1_POU_DBD_monomeric_9_1 SELEX - 36400025 36400033 4.0E-06 TATGCTAAT 9 POU3F4_POU_DBD_monomeric_11_1 SELEX - 36402022 36402032 3.0E-06 TACATAAATAA 11 SRY_HMG_DBD_dimeric_16_1 SELEX - 36401475 36401490 1.0E-05 TGCAATAAAAATTCTT 16 HNF1B_MA0153.1 JASPAR - 36401411 36401422 1.0E-05 TTACTGTTTGAT 12 FOXC1_forkhead_DBD_monomeric_11_1 SELEX - 36402022 36402032 9.0E-06 TACATAAATAA 11 POU2F3_POU_DBD_monomeric_9_1 SELEX - 36400025 36400033 3.0E-06 TATGCTAAT 9 POU1F1_POU_DBD_monomeric_14_1 SELEX + 36402012 36402025 1.0E-06 TATATGGTAATTAT 14 FOXO1_forkhead_DBD_monomeric_8_1 SELEX - 36399090 36399097 7.0E-06 GTAAACAA 8 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 36397282 36397293 0.0E+00 ACTAAAAATAAA 12 POU2F2_POU_DBD_monomeric_11_1 SELEX - 36400024 36400034 2.0E-06 GTATGCTAATT 11 POU2F2_POU_DBD_monomeric_11_1 SELEX + 36402013 36402023 5.0E-06 ATATGGTAATT 11 ISX_homeodomain_DBD_dimeric_13_1 SELEX - 36399107 36399119 9.0E-06 ATAACCTAATTTT 13 Creb5_bZIP_DBD_dimeric_12_1 SELEX - 36400307 36400318 8.0E-06 AATGATGTCACC 12 POU3F4_POU_DBD_monomeric_9_1 SELEX - 36400025 36400033 3.0E-06 TATGCTAAT 9 IRF7_IRF_DBD_trimeric_17_1 SELEX - 36401347 36401363 8.0E-06 TAAGAGAAAATCTATAG 17 Pou2f2_POU_DBD_monomeric_9_1 SELEX - 36400025 36400033 3.0E-06 TATGCTAAT 9 JDP2_bZIP_full_dimeric_12_1 SELEX - 36400307 36400318 8.0E-06 AATGATGTCACC 12 TEAD1_TEA_full_monomeric_10_1 SELEX - 36398980 36398989 6.0E-06 TACATTCCTA 10 POU4F3_POU_DBD_monomeric_16_1 SELEX - 36402018 36402033 1.0E-06 GTACATAAATAATTAC 16 MEF2B_MADS_full_dimeric_12_1 SELEX - 36397282 36397293 1.0E-06 ACTAAAAATAAA 12 PROP1_homeodomain_full_dimeric_11_1 SELEX - 36399108 36399118 1.0E-05 TAACCTAATTT 11 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX - 36401481 36401490 5.0E-06 TGCAATAAAA 10 ESRRG_nuclearreceptor_full_dimeric_18_1 SELEX - 36402737 36402754 4.0E-06 AAGGTTGGCTGAAGCTCA 18 POU3F3_POU_DBD_monomeric_13_1 SELEX - 36400023 36400035 1.0E-05 GGTATGCTAATTC 13 POU3F3_POU_DBD_monomeric_13_1 SELEX + 36402012 36402024 1.0E-06 TATATGGTAATTA 13 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX - 36401481 36401489 3.0E-06 GCAATAAAA 9 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 36397280 36397290 8.0E-06 AAAAATAAAAA 11 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 36402023 36402033 8.0E-06 GTACATAAATA 11 MEF2A_MA0052.1 JASPAR + 36397283 36397292 2.0E-06 TTATTTTTAG 10 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX - 36401480 36401489 2.0E-06 GCAATAAAAA 10 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX - 36399091 36399104 3.0E-06 ATGAAGAGTAAACA 14 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX - 36399289 36399302 5.0E-06 GTAAAATATAAAAA 14 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX - 36402016 36402029 3.0E-06 ATAAATAATTACCA 14 HNF1A_homeodomain_full_dimeric_15_1 SELEX + 36401410 36401424 8.0E-06 AATCAAACAGTAACT 15 HNF1A_homeodomain_full_dimeric_15_1 SELEX - 36402016 36402030 2.0E-06 CATAAATAATTACCA 15 HOXC11_homeodomain_full_monomeric_11_2 SELEX - 36401480 36401490 1.0E-06 TGCAATAAAAA 11 SP1_MA0079.2 JASPAR - 36401195 36401204 7.0E-06 CCCCGCCCCC 10 DRGX_homeodomain_DBD_dimeric_13_1 SELEX - 36399107 36399119 6.0E-06 ATAACCTAATTTT 13 MEOX2_homeodomain_DBD_monomeric_10_1 SELEX + 36402017 36402026 9.0E-06 GGTAATTATT 10 PHOX2B_homeodomain_full_dimeric_11_1 SELEX - 36399108 36399118 5.0E-06 TAACCTAATTT 11 SP4_C2H2_full_monomeric_17_1 SELEX + 36400883 36400899 7.0E-06 CCGGCCACGCCCCTCCC 17 SP4_C2H2_full_monomeric_17_1 SELEX - 36401192 36401208 8.0E-06 CCCGCCCCGCCCCCTTC 17 CREB3_bZIP_full_dimeric_14_1 SELEX - 36400306 36400319 1.0E-05 AAATGATGTCACCC 14 TBX4_TBX_DBD_dimeric_20_1 SELEX - 36397252 36397271 7.0E-06 GGGTGTGGTGACCAGCACCT 20 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 36397280 36397290 4.0E-06 AAAAATAAAAA 11 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 36402019 36402029 4.0E-06 ATAAATAATTA 11 HOXA13_homeodomain_full_monomeric_10_1 SELEX - 36401480 36401489 2.0E-06 GCAATAAAAA 10 HNF1B_homeodomain_full_dimeric_13_1 SELEX + 36402017 36402029 3.0E-06 GGTAATTATTTAT 13 PRRX1_homeodomain_full_dimeric_11_1 SELEX - 36399108 36399118 4.0E-06 TAACCTAATTT 11 CART1_homeodomain_DBD_dimeric_13_1 SELEX - 36399107 36399119 4.0E-06 ATAACCTAATTTT 13 POU3F1_POU_DBD_monomeric_12_1 SELEX - 36400023 36400034 5.0E-06 GTATGCTAATTC 12 POU3F1_POU_DBD_monomeric_12_1 SELEX + 36402013 36402024 1.0E-06 ATATGGTAATTA 12 Klf12_C2H2_DBD_monomeric_15_1 SELEX + 36400885 36400899 5.0E-06 GGCCACGCCCCTCCC 15 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 36398947 36398961 4.0E-06 AAAAAAAGAAAGTGA 15 FOXC2_forkhead_DBD_dimeric_14_1 SELEX + 36402017 36402030 7.0E-06 GGTAATTATTTATG 14 FOXC2_forkhead_DBD_dimeric_14_1 SELEX - 36402017 36402030 8.0E-06 CATAAATAATTACC 14 Hltf_MA0109.1 JASPAR + 36398898 36398907 2.0E-06 AAACTTTTAT 10 Pou5f1_MA0142.1 JASPAR + 36399049 36399063 4.0E-06 CATTATGATGCTAAC 15 Pou5f1_MA0142.1 JASPAR - 36400066 36400080 1.0E-06 CTTTGTGTTGCAAAA 15 POU2F1_POU_DBD_monomeric_12_1 SELEX - 36400024 36400035 4.0E-06 GGTATGCTAATT 12 POU2F1_POU_DBD_monomeric_12_1 SELEX + 36402012 36402023 5.0E-06 TATATGGTAATT 12 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX - 36401480 36401489 2.0E-06 GCAATAAAAA 10 PHOX2A_homeodomain_DBD_dimeric_11_1 SELEX - 36399108 36399118 5.0E-06 TAACCTAATTT 11 CPEB1_RRM_full_monomeric_8_1 SELEX - 36397280 36397287 4.0E-06 AATAAAAA 8 CPEB1_RRM_full_monomeric_8_1 SELEX - 36401480 36401487 4.0E-06 AATAAAAA 8 FOXB1_forkhead_full_monomeric_9_1 SELEX - 36399090 36399098 7.0E-06 AGTAAACAA 9 FOXO3_forkhead_full_monomeric_8_1 SELEX - 36399090 36399097 7.0E-06 GTAAACAA 8 HNF1B_homeodomain_full_dimeric_15_1 SELEX + 36401410 36401424 7.0E-06 AATCAAACAGTAACT 15 HNF1B_homeodomain_full_dimeric_15_1 SELEX - 36402016 36402030 2.0E-06 CATAAATAATTACCA 15 POU3F2_POU_DBD_monomeric_12_1 SELEX - 36400023 36400034 3.0E-06 GTATGCTAATTC 12 POU3F2_POU_DBD_monomeric_12_1 SELEX + 36402013 36402024 1.0E-06 ATATGGTAATTA 12 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX - 36401480 36401490 4.0E-06 TGCAATAAAAA 11 Sox2_MA0143.1 JASPAR - 36400067 36400081 1.0E-06 TCTTTGTGTTGCAAA 15 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 36397280 36397292 6.0E-06 CTAAAAATAAAAA 13 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 36402019 36402031 2.0E-06 ACATAAATAATTA 13 CDX2_homeodomain_DBD_monomeric_9_1 SELEX - 36401481 36401489 3.0E-06 GCAATAAAA 9 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 36397278 36397290 2.0E-06 AAAAATAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 36398964 36398976 2.0E-06 ACAAACAGAAACA 13 CDX1_homeodomain_DBD_monomeric_9_1 SELEX - 36401481 36401489 3.0E-06 GCAATAAAA 9 POU4F1_POU_DBD_monomeric_14_1 SELEX - 36402020 36402033 1.0E-06 GTACATAAATAATT 14 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX - 36401480 36401490 1.0E-06 TGCAATAAAAA 11 Irx3_homeodomain_DBD_dimeric_12_1 SELEX + 36398988 36398999 8.0E-06 TAACATGAATTA 12 TEAD1_MA0090.1 JASPAR - 36398978 36398989 5.0E-06 TACATTCCTAGG 12 HOXB13_homeodomain_DBD_monomeric_10_1 SELEX - 36401480 36401489 4.0E-06 GCAATAAAAA 10 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 36402016 36402029 2.0E-06 ATAAATAATTACCA 14 V_DMRT4_01_M01149 TRANSFAC + 36401470 36401482 4.0E-06 AAAGTAAGAATTT 13 V_RUSH1A_02_M01107 TRANSFAC + 36398898 36398907 2.0E-06 AAACTTTTAT 10 V_HOXA9_01_M01351 TRANSFAC - 36401476 36401492 1.0E-06 ACTGCAATAAAAATTCT 17 V_FOXP1_01_M00987 TRANSFAC + 36402022 36402041 6.0E-06 TTATTTATGTACACTTGTCT 20 V_CEBPG_Q6_M00622 TRANSFAC + 36398888 36398900 0.0E+00 ATCATTTCAGAAA 13 V_OSR1_03_M02784 TRANSFAC - 36401370 36401385 1.0E-06 CGGAACAGTAGCAACA 16 V_HNF3B_01_M00131 TRANSFAC + 36402018 36402032 1.0E-06 GTAATTATTTATGTA 15 V_KLF15_Q2_M01714 TRANSFAC - 36400887 36400900 4.0E-06 GGGGAGGGGCGTGG 14 V_E2A_Q6_01_M02088 TRANSFAC + 36400360 36400372 5.0E-06 GGCCATCTGCCGG 13 V_TST1_02_M01316 TRANSFAC - 36402015 36402031 4.0E-06 ACATAAATAATTACCAT 17 V_TST1_02_M01316 TRANSFAC + 36402016 36402032 2.0E-06 TGGTAATTATTTATGTA 17 V_DBX1_01_M01483 TRANSFAC + 36397275 36397291 1.0E-05 TAATTTTTTTATTTTTA 17 V_DBX1_01_M01483 TRANSFAC - 36402012 36402028 4.0E-06 TAAATAATTACCATATA 17 V_DBX1_01_M01483 TRANSFAC - 36402019 36402035 9.0E-06 GTGTACATAAATAATTA 17 V_FREAC7_01_M00293 TRANSFAC - 36402019 36402034 1.0E-06 TGTACATAAATAATTA 16 V_ZSCAN4_03_M02838 TRANSFAC - 36402024 36402040 4.0E-06 GACAAGTGTACATAAAT 17 V_TCF3_01_M01594 TRANSFAC - 36398947 36398959 6.0E-06 ACTTTCTTTTTTT 13 V_TCF3_01_M01594 TRANSFAC - 36400069 36400081 7.0E-06 TCTTTGTGTTGCA 13 V_CDX2_Q5_01_M01659 TRANSFAC - 36402022 36402032 3.0E-06 TACATAAATAA 11 V_XFD1_01_M00267 TRANSFAC - 36399087 36399100 7.0E-06 AGAGTAAACAAGAT 14 V_SOX14_05_M02902 TRANSFAC + 36401490 36401504 8.0E-06 AGTACACAAAGGTGT 15 V_MAFK_03_M02776 TRANSFAC - 36401471 36401485 1.0E-06 TAAAAATTCTTACTT 15 V_SMAD3_Q6_01_M01888 TRANSFAC - 36399069 36399081 6.0E-06 AGTCAGACATAAC 13 V_YY1_02_M00069 TRANSFAC + 36399079 36399098 1.0E-06 ACTATGCCATCTTGTTTACT 20 V_FOXA2_04_M02749 TRANSFAC - 36399086 36399102 6.0E-06 GAAGAGTAAACAAGATG 17 V_ZFX_01_M01593 TRANSFAC + 36400837 36400852 3.0E-06 GACCGGGCCTCGGCCC 16 V_DLX3_01_M01400 TRANSFAC - 36402014 36402030 0.0E+00 CATAAATAATTACCATA 17 V_HMGIY_Q3_M01010 TRANSFAC - 36400077 36400091 5.0E-06 AAAGTATTTTTCTTT 15 V_FOXD3_01_M00130 TRANSFAC + 36402020 36402031 4.0E-06 AATTATTTATGT 12 V_BCL6_01_M01183 TRANSFAC + 36397275 36397290 6.0E-06 TAATTTTTTTATTTTT 16 V_BCL6_01_M01183 TRANSFAC + 36402012 36402027 8.0E-06 TATATGGTAATTATTT 16 V_FOXO4_02_M00476 TRANSFAC + 36399087 36399100 5.0E-06 ATCTTGTTTACTCT 14 V_HOXA3_01_M00395 TRANSFAC - 36399107 36399115 7.0E-06 CCTAATTTT 9 V_POU5F1_02_M02245 TRANSFAC + 36399049 36399063 4.0E-06 CATTATGATGCTAAC 15 V_POU5F1_02_M02245 TRANSFAC - 36400066 36400080 1.0E-06 CTTTGTGTTGCAAAA 15 V_HOXA13_02_M01297 TRANSFAC - 36397280 36397288 4.0E-06 AAATAAAAA 9 V_SATB1_Q3_M01723 TRANSFAC - 36402014 36402029 8.0E-06 ATAAATAATTACCATA 16 V_PROP1_01_M01294 TRANSFAC + 36397275 36397285 1.0E-06 TAATTTTTTTA 11 V_SP1_Q6_01_M00931 TRANSFAC + 36401196 36401205 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC + 36401201 36401210 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC + 36401206 36401215 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC + 36401211 36401220 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC - 36401290 36401299 4.0E-06 GGGGCGGGGC 10 V_MEF2_02_M00231 TRANSFAC - 36397278 36397299 0.0E+00 GTCTCTACTAAAAATAAAAAAA 22 V_MEF2_02_M00231 TRANSFAC + 36399098 36399119 9.0E-06 TCTTCATCAAAAATTAGGTTAT 22 V_EGR_Q6_M00807 TRANSFAC - 36400817 36400827 7.0E-06 GTGGGGGCGGA 11 V_IRF_Q6_01_M00972 TRANSFAC + 36398948 36398958 5.0E-06 AAAAAAGAAAG 11 V_IRF2_Q6_M01882 TRANSFAC + 36398946 36398961 1.0E-06 CAAAAAAAGAAAGTGA 16 V_OCT1_01_M00135 TRANSFAC - 36400020 36400038 1.0E-06 TTGGGTATGCTAATTCTAC 19 V_POU2F3_01_M01476 TRANSFAC - 36400021 36400036 1.0E-06 GGGTATGCTAATTCTA 16 V_POU1F1_Q6_M00744 TRANSFAC + 36398992 36399001 7.0E-06 ATGAATTAAA 10 V_FOXO3A_Q1_M01137 TRANSFAC - 36397280 36397291 2.0E-06 TAAAAATAAAAA 12 V_FOXO3A_Q1_M01137 TRANSFAC - 36399087 36399098 2.0E-06 AGTAAACAAGAT 12 V_HOXD1_01_M01448 TRANSFAC + 36402014 36402030 5.0E-06 TATGGTAATTATTTATG 17 V_YY1_Q6_M00793 TRANSFAC + 36399084 36399092 7.0E-06 GCCATCTTG 9 V_FOXJ1_03_M02750 TRANSFAC - 36399085 36399100 4.0E-06 AGAGTAAACAAGATGG 16 V_SP1_03_M02281 TRANSFAC - 36401195 36401204 7.0E-06 CCCCGCCCCC 10 V_HOXA2_01_M01402 TRANSFAC - 36402013 36402028 7.0E-06 TAAATAATTACCATAT 16 V_HOXA2_01_M01402 TRANSFAC + 36402015 36402030 4.0E-06 ATGGTAATTATTTATG 16 V_OCT_C_M00210 TRANSFAC + 36400022 36400034 7.0E-06 AGAATTAGCATAC 13 V_NKX61_03_M01489 TRANSFAC - 36402014 36402030 4.0E-06 CATAAATAATTACCATA 17 V_DLX2_01_M01468 TRANSFAC + 36402015 36402030 9.0E-06 ATGGTAATTATTTATG 16 V_HOXC6_01_M01406 TRANSFAC - 36402013 36402029 9.0E-06 ATAAATAATTACCATAT 17 V_HOXC6_01_M01406 TRANSFAC + 36402014 36402030 2.0E-06 TATGGTAATTATTTATG 17 V_SP1_02_M01303 TRANSFAC - 36400895 36400905 3.0E-06 GGGGCGGGGAG 11 V_HOXD13_01_M01404 TRANSFAC - 36401477 36401492 5.0E-06 ACTGCAATAAAAATTC 16 V_NFY_Q6_01_M00775 TRANSFAC + 36398850 36398862 5.0E-06 TCTTGACCAATAA 13 V_SOX21_03_M02803 TRANSFAC + 36399287 36399302 8.0E-06 TTTTTTTATATTTTAC 16 V_TCFAP2E_04_M02926 TRANSFAC - 36397276 36397289 2.0E-06 AAAATAAAAAAATT 14 V_TCFAP2E_04_M02926 TRANSFAC - 36397278 36397291 8.0E-06 TAAAAATAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 36397281 36397294 2.0E-06 TACTAAAAATAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 36399287 36399300 9.0E-06 AAAATATAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 36400072 36400085 7.0E-06 AACACAAAGAAAAA 14 V_PAX6_02_M01391 TRANSFAC + 36397271 36397286 5.0E-06 CGACTAATTTTTTTAT 16 V_LDSPOLYA_B_M00317 TRANSFAC + 36399087 36399102 5.0E-06 ATCTTGTTTACTCTTC 16 V_DLX5_01_M01388 TRANSFAC + 36402015 36402030 2.0E-06 ATGGTAATTATTTATG 16 V_NKX62_Q2_M00489 TRANSFAC + 36402015 36402026 9.0E-06 ATGGTAATTATT 12 V_NKX62_Q2_M00489 TRANSFAC - 36402017 36402028 5.0E-06 TAAATAATTACC 12 V_MEF2A_Q6_M02024 TRANSFAC + 36397284 36397293 4.0E-06 TATTTTTAGT 10 V_ELF4_04_M02850 TRANSFAC - 36397275 36397291 9.0E-06 TAAAAATAAAAAAATTA 17 V_ELF4_04_M02850 TRANSFAC - 36397276 36397292 6.0E-06 CTAAAAATAAAAAAATT 17 V_ELF4_04_M02850 TRANSFAC - 36397277 36397293 1.0E-06 ACTAAAAATAAAAAAAT 17 V_ELF4_04_M02850 TRANSFAC - 36397280 36397296 1.0E-05 TCTACTAAAAATAAAAA 17 V_ELF4_04_M02850 TRANSFAC - 36399287 36399303 7.0E-06 TGTAAAATATAAAAAAA 17 V_SOX13_03_M02797 TRANSFAC - 36401363 36401378 5.0E-06 GTAGCAACAATTTACT 16 V_GC_01_M00255 TRANSFAC + 36401194 36401207 2.0E-06 AGGGGGCGGGGCGG 14 V_SOX7_03_M02807 TRANSFAC + 36400041 36400062 7.0E-06 TTTACTGAATAATAGCATATAT 22 V_FOXA2_02_M02853 TRANSFAC - 36397276 36397290 3.0E-06 AAAAATAAAAAAATT 15 V_FOXA2_02_M02853 TRANSFAC - 36399285 36399299 5.0E-06 AAATATAAAAAAAGT 15 V_FOXA2_02_M02853 TRANSFAC + 36401596 36401610 6.0E-06 AATAAGAACAAAGAT 15 V_HOXA6_01_M01392 TRANSFAC - 36402013 36402028 1.0E-06 TAAATAATTACCATAT 16 V_HOXA6_01_M01392 TRANSFAC + 36402015 36402030 2.0E-06 ATGGTAATTATTTATG 16 V_POU3F2_01_M00463 TRANSFAC + 36397273 36397286 7.0E-06 ACTAATTTTTTTAT 14 V_PR_01_M00954 TRANSFAC - 36400216 36400242 1.0E-06 GGATAGGCTGCGTTTTGTTCTCAGGGG 27 V_ZFP105_03_M02827 TRANSFAC - 36397276 36397290 3.0E-06 AAAAATAAAAAAATT 15 V_ZFP105_03_M02827 TRANSFAC - 36397277 36397291 0.0E+00 TAAAAATAAAAAAAT 15 V_ZFP105_03_M02827 TRANSFAC - 36397280 36397294 6.0E-06 TACTAAAAATAAAAA 15 V_ZFP105_03_M02827 TRANSFAC - 36399286 36399300 1.0E-05 AAAATATAAAAAAAG 15 V_HOXB13_01_M01467 TRANSFAC - 36401477 36401492 2.0E-06 ACTGCAATAAAAATTC 16 V_FOXO1_02_M00474 TRANSFAC + 36399087 36399100 1.0E-06 ATCTTGTTTACTCT 14 V_HNF1_Q6_M00790 TRANSFAC + 36399288 36399305 2.0E-06 TTTTTTATATTTTACAGA 18 V_SOX8_04_M02912 TRANSFAC - 36398986 36398999 5.0E-06 TAATTCATGTTACA 14 V_SOX7_04_M02911 TRANSFAC + 36402015 36402036 1.0E-05 ATGGTAATTATTTATGTACACT 22 V_POLY_C_M00212 TRANSFAC - 36401471 36401488 3.0E-06 CAATAAAAATTCTTACTT 18 V_XFD3_01_M00269 TRANSFAC - 36399087 36399100 7.0E-06 AGAGTAAACAAGAT 14 V_SP4_03_M02810 TRANSFAC - 36401190 36401206 1.0E-06 CGCCCCGCCCCCTTCCC 17 V_KROX_Q6_M00982 TRANSFAC + 36400817 36400830 3.0E-06 TCCGCCCCCACGCC 14 V_KROX_Q6_M00982 TRANSFAC - 36401190 36401203 3.0E-06 CCCGCCCCCTTCCC 14 V_RSRFC4_Q2_M00407 TRANSFAC - 36397279 36397295 1.0E-06 CTACTAAAAATAAAAAA 17 V_HOXA3_07_M02869 TRANSFAC + 36402682 36402695 4.0E-06 AAAATCTATTACAG 14 V_HOXB9_01_M01426 TRANSFAC - 36401477 36401492 8.0E-06 ACTGCAATAAAAATTC 16 V_SP1_Q6_M00196 TRANSFAC + 36401194 36401206 0.0E+00 AGGGGGCGGGGCG 13 V_SP1_Q6_M00196 TRANSFAC + 36401199 36401211 7.0E-06 GCGGGGCGGGGCG 13 V_SP1_Q6_M00196 TRANSFAC + 36401204 36401216 7.0E-06 GCGGGGCGGGGCG 13 V_SP1_Q6_M00196 TRANSFAC + 36401209 36401221 5.0E-06 GCGGGGCGGGGCT 13 V_HNF1B_04_M02266 TRANSFAC - 36401411 36401422 1.0E-05 TTACTGTTTGAT 12 V_FOXK1_04_M02856 TRANSFAC + 36402156 36402170 5.0E-06 CCAGCAATAACATCA 15 V_HOXA1_01_M01487 TRANSFAC - 36402015 36402030 6.0E-06 CATAAATAATTACCAT 16 V_HOXB6_01_M01460 TRANSFAC + 36402013 36402028 9.0E-06 ATATGGTAATTATTTA 16 V_HOXB6_01_M01460 TRANSFAC - 36402015 36402030 7.0E-06 CATAAATAATTACCAT 16 V_CDX2_01_M01449 TRANSFAC - 36401478 36401493 1.0E-06 TACTGCAATAAAAATT 16 V_HNF3A_01_M01261 TRANSFAC - 36399090 36399099 4.0E-06 GAGTAAACAA 10 V_MAZ_Q6_01_M02023 TRANSFAC - 36400812 36400825 6.0E-06 GGGGGCGGAGAGGA 14 V_MAZ_Q6_01_M02023 TRANSFAC - 36400893 36400906 8.0E-06 CGGGGCGGGGAGGG 14 V_HNF3_Q6_M00791 TRANSFAC - 36397278 36397290 6.0E-06 AAAAATAAAAAAA 13 V_OCT1_05_M00161 TRANSFAC + 36400022 36400035 0.0E+00 AGAATTAGCATACC 14 V_IRF_Q6_M00772 TRANSFAC - 36398948 36398962 0.0E+00 CTCACTTTCTTTTTT 15 V_CDX2_Q5_M00729 TRANSFAC - 36398905 36398918 5.0E-06 AAATTCTTATGATA 14 V_SOX_Q6_M01014 TRANSFAC - 36400422 36400434 6.0E-06 CTCTTTGTTCCCG 13 V_HNF1_Q6_01_M01011 TRANSFAC - 36397277 36397297 4.0E-06 CTCTACTAAAAATAAAAAAAT 21 V_HNF1_Q6_01_M01011 TRANSFAC - 36399286 36399306 2.0E-06 ATCTGTAAAATATAAAAAAAG 21 V_NKX22_02_M01372 TRANSFAC - 36402655 36402671 8.0E-06 TTCAGCACTTGAGGAAT 17 V_MEF2_03_M00232 TRANSFAC - 36397278 36397299 1.0E-06 GTCTCTACTAAAAATAAAAAAA 22 V_ISRE_01_M00258 TRANSFAC - 36398946 36398960 1.0E-05 CACTTTCTTTTTTTG 15 V_CDX1_01_M01373 TRANSFAC - 36401478 36401493 2.0E-06 TACTGCAATAAAAATT 16 V_OCT1_08_M01354 TRANSFAC + 36402013 36402028 5.0E-06 ATATGGTAATTATTTA 16 V_SP1SP3_Q4_M01219 TRANSFAC - 36401192 36401202 4.0E-06 CCGCCCCCTTC 11 V_PIT1_01_M01465 TRANSFAC - 36402015 36402031 5.0E-06 ACATAAATAATTACCAT 17 V_PIT1_01_M01465 TRANSFAC + 36402016 36402032 1.0E-06 TGGTAATTATTTATGTA 17 V_SOX12_04_M02900 TRANSFAC + 36401489 36401504 5.0E-06 CAGTACACAAAGGTGT 16 V_MEF2_04_M00233 TRANSFAC - 36397278 36397299 1.0E-06 GTCTCTACTAAAAATAAAAAAA 22 V_MUSCLE_INI_B_M00321 TRANSFAC + 36401272 36401292 9.0E-06 GCGCAGCACCACTGCGCAGCC 21 V_TEF_01_M01305 TRANSFAC - 36398978 36398989 5.0E-06 TACATTCCTAGG 12 V_MEF2_Q6_01_M00941 TRANSFAC + 36397281 36397292 5.0E-06 TTTTATTTTTAG 12 V_NCX_02_M01420 TRANSFAC - 36397276 36397292 1.0E-05 CTAAAAATAAAAAAATT 17 V_HB24_01_M01399 TRANSFAC - 36402017 36402031 1.0E-06 ACATAAATAATTACC 15 V_ISGF3G_03_M02771 TRANSFAC + 36398947 36398961 7.0E-06 AAAAAAAGAAAGTGA 15 V_POU6F1_01_M00465 TRANSFAC - 36402021 36402031 2.0E-06 ACATAAATAAT 11 V_SP1_01_M00008 TRANSFAC - 36400921 36400930 7.0E-06 GAGGCGGGGT 10 V_SP1_01_M00008 TRANSFAC - 36400931 36400940 7.0E-06 GAGGCGGGGT 10 V_TBP_06_M02814 TRANSFAC + 36397276 36397291 7.0E-06 AATTTTTTTATTTTTA 16 V_TBP_06_M02814 TRANSFAC - 36397276 36397291 6.0E-06 TAAAAATAAAAAAATT 16 V_TBP_06_M02814 TRANSFAC + 36399285 36399300 1.0E-06 ACTTTTTTTATATTTT 16 V_TBP_06_M02814 TRANSFAC - 36399285 36399300 1.0E-05 AAAATATAAAAAAAGT 16 V_TBP_06_M02814 TRANSFAC + 36399287 36399302 2.0E-06 TTTTTTTATATTTTAC 16 V_TBP_06_M02814 TRANSFAC - 36399287 36399302 1.0E-06 GTAAAATATAAAAAAA 16 V_OCT4_02_M01124 TRANSFAC - 36398902 36398916 1.0E-06 ATTCTTATGATAAAA 15 V_SOX11_03_M02795 TRANSFAC + 36401597 36401613 0.0E+00 ATAAGAACAAAGATTGA 17 V_NKX63_01_M01470 TRANSFAC - 36402014 36402030 9.0E-06 CATAAATAATTACCATA 17 V_MZF1_02_M00084 TRANSFAC + 36401585 36401597 2.0E-06 TGGGGAGGGGAAA 13 V_IRX5_01_M01472 TRANSFAC - 36398984 36399000 6.0E-06 TTAATTCATGTTACATT 17 V_ICSBP_Q6_M00699 TRANSFAC + 36398949 36398960 1.0E-06 AAAAAGAAAGTG 12 V_SP4_Q5_M01273 TRANSFAC + 36400891 36400901 7.0E-06 GCCCCTCCCCG 11 V_SP4_Q5_M01273 TRANSFAC - 36401195 36401205 1.0E-06 GCCCCGCCCCC 11 V_SP4_Q5_M01273 TRANSFAC - 36401200 36401210 2.0E-06 GCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC - 36401205 36401215 2.0E-06 GCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC - 36401210 36401220 2.0E-06 GCCCCGCCCCG 11 V_FREAC2_01_M00290 TRANSFAC - 36399087 36399102 2.0E-06 GAAGAGTAAACAAGAT 16 V_HFH8_01_M00294 TRANSFAC + 36402020 36402032 2.0E-06 AATTATTTATGTA 13 V_DLX7_01_M01486 TRANSFAC - 36402014 36402030 3.0E-06 CATAAATAATTACCATA 17 V_MTF1_06_M02882 TRANSFAC - 36397275 36397288 1.0E-06 AAATAAAAAAATTA 14 V_MTF1_06_M02882 TRANSFAC - 36397278 36397291 4.0E-06 TAAAAATAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC - 36399286 36399299 0.0E+00 AAATATAAAAAAAG 14 V_MTF1_06_M02882 TRANSFAC - 36399287 36399300 4.0E-06 AAAATATAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC + 36399951 36399964 1.0E-05 GCTTAAGAAAAAAG 14 V_MTF1_06_M02882 TRANSFAC + 36401595 36401608 1.0E-06 AAATAAGAACAAAG 14 V_TTF1_Q5_M02034 TRANSFAC - 36402656 36402669 5.0E-06 CAGCACTTGAGGAA 14 V_MAZR_01_M00491 TRANSFAC + 36401585 36401597 9.0E-06 TGGGGAGGGGAAA 13 V_BRN4_01_M01473 TRANSFAC - 36402015 36402031 3.0E-06 ACATAAATAATTACCAT 17 V_BRN4_01_M01473 TRANSFAC + 36402016 36402032 2.0E-06 TGGTAATTATTTATGTA 17 V_HOXB8_01_M01451 TRANSFAC - 36401478 36401493 9.0E-06 TACTGCAATAAAAATT 16 V_HOXB8_01_M01451 TRANSFAC + 36402014 36402029 3.0E-06 TATGGTAATTATTTAT 16 V_OCT2_01_M01368 TRANSFAC - 36400021 36400036 2.0E-06 GGGTATGCTAATTCTA 16 V_CNOT3_01_M01253 TRANSFAC - 36400471 36400480 8.0E-06 GGCCGCGCCC 10 V_FOXL1_04_M02753 TRANSFAC - 36399086 36399102 7.0E-06 GAAGAGTAAACAAGATG 17 V_NKX61_02_M01469 TRANSFAC - 36402015 36402030 2.0E-06 CATAAATAATTACCAT 16 V_NKX61_02_M01469 TRANSFAC + 36402017 36402032 9.0E-06 GGTAATTATTTATGTA 16 V_IPF1_01_M01233 TRANSFAC - 36402018 36402027 1.0E-05 AAATAATTAC 10 V_SMAD3_03_M02794 TRANSFAC - 36399068 36399084 1.0E-05 CATAGTCAGACATAACT 17 V_OSR2_03_M02785 TRANSFAC - 36401370 36401385 3.0E-06 CGGAACAGTAGCAACA 16 V_FOXO3_01_M00477 TRANSFAC + 36399087 36399100 3.0E-06 ATCTTGTTTACTCT 14 V_TBX15_02_M01264 TRANSFAC - 36399931 36399948 7.0E-06 TGGACTTAACGTATGAAA 18 V_MYB_Q3_M00773 TRANSFAC + 36399062 36399072 2.0E-06 ACAGTCAGTTA 11 V_BARX2_01_M01431 TRANSFAC + 36402015 36402030 1.0E-06 ATGGTAATTATTTATG 16 V_RSRFC4_01_M00026 TRANSFAC + 36397280 36397295 1.0E-06 TTTTTATTTTTAGTAG 16 V_PLZF_02_M01075 TRANSFAC + 36399094 36399122 7.0E-06 TTACTCTTCATCAAAAATTAGGTTATTTT 29 V_PLZF_02_M01075 TRANSFAC - 36400076 36400104 4.0E-06 TGGCTTGTAAGGTAAAGTATTTTTCTTTG 29 V_SMAD_Q6_01_M00974 TRANSFAC - 36399072 36399082 4.0E-06 TAGTCAGACAT 11 V_SOX21_04_M02907 TRANSFAC + 36401363 36401379 9.0E-06 AGTAAATTGTTGCTACT 17 V_IRX2_01_M01405 TRANSFAC - 36398984 36399000 3.0E-06 TTAATTCATGTTACATT 17 V_HSF_Q6_M00641 TRANSFAC - 36402773 36402785 4.0E-06 TTTGAGAGGTTTC 13 V_OCT1_07_M00248 TRANSFAC - 36400024 36400035 1.0E-06 GGTATGCTAATT 12 V_OCT1_07_M00248 TRANSFAC + 36402012 36402023 0.0E+00 TATATGGTAATT 12 V_IRF1_Q6_01_M01881 TRANSFAC - 36398947 36398960 1.0E-06 CACTTTCTTTTTTT 14 V_SOX8_03_M02808 TRANSFAC - 36400043 36400059 1.0E-05 TATGCTATTATTCAGTA 17 V_SOX2_01_M02246 TRANSFAC - 36400067 36400081 1.0E-06 TCTTTGTGTTGCAAA 15 V_SRF_06_M02916 TRANSFAC - 36397275 36397291 6.0E-06 TAAAAATAAAAAAATTA 17 V_SRF_06_M02916 TRANSFAC - 36397276 36397292 0.0E+00 CTAAAAATAAAAAAATT 17 V_SRF_06_M02916 TRANSFAC - 36397277 36397293 2.0E-06 ACTAAAAATAAAAAAAT 17 V_SRF_06_M02916 TRANSFAC + 36399951 36399967 3.0E-06 GCTTAAGAAAAAAGAAA 17 V_HFH3_01_M00289 TRANSFAC + 36402020 36402032 8.0E-06 AATTATTTATGTA 13 V_DLX3_02_M02051 TRANSFAC - 36402018 36402025 5.0E-06 ATAATTAC 8 V_HOXD8_01_M01432 TRANSFAC - 36402012 36402028 4.0E-06 TAAATAATTACCATATA 17 V_SMAD3_Q6_M00701 TRANSFAC + 36399073 36399081 6.0E-06 TGTCTGACT 9 V_SOX4_01_M01308 TRANSFAC - 36401170 36401177 1.0E-05 AACAAAGG 8 V_FOXO1_01_M00473 TRANSFAC - 36399089 36399098 7.0E-06 AGTAAACAAG 10 V_SOX2_Q6_M01272 TRANSFAC - 36400070 36400085 5.0E-06 TTTTTCTTTGTGTTGC 16 V_SOX2_Q6_M01272 TRANSFAC - 36401598 36401613 1.0E-05 TCAATCTTTGTTCTTA 16 V_PR_02_M00957 TRANSFAC - 36400216 36400242 9.0E-06 GGATAGGCTGCGTTTTGTTCTCAGGGG 27 V_HNF3B_Q6_M02014 TRANSFAC + 36399090 36399098 2.0E-06 TTGTTTACT 9 V_MOX1_01_M01443 TRANSFAC - 36402013 36402028 9.0E-06 TAAATAATTACCATAT 16 V_PAX4_02_M00377 TRANSFAC - 36402017 36402027 0.0E+00 AAATAATTACC 11 V_SOX12_03_M02796 TRANSFAC - 36401596 36401609 2.0E-06 TCTTTGTTCTTATT 14 V_PIT1_Q6_M00802 TRANSFAC + 36401342 36401359 1.0E-05 AATTCCTATAGATTTTCT 18 V_HOXD3_01_M01338 TRANSFAC - 36402015 36402030 8.0E-06 CATAAATAATTACCAT 16 V_FREAC4_01_M00292 TRANSFAC - 36399087 36399102 3.0E-06 GAAGAGTAAACAAGAT 16 V_SP1_Q2_01_M00933 TRANSFAC - 36401195 36401204 4.0E-06 CCCCGCCCCC 10 V_LHX4_01_M01421 TRANSFAC + 36402014 36402030 1.0E-06 TATGGTAATTATTTATG 17 V_HOXA10_01_M01464 TRANSFAC - 36401477 36401492 3.0E-06 ACTGCAATAAAAATTC 16 V_CMAF_01_M01070 TRANSFAC - 36402715 36402733 9.0E-06 GGATTTGCTGAAGCTTAGA 19 V_DLX1_01_M01439 TRANSFAC + 36402013 36402026 8.0E-06 ATATGGTAATTATT 14 V_SP1_Q4_01_M00932 TRANSFAC + 36401194 36401206 0.0E+00 AGGGGGCGGGGCG 13 V_SP1_Q4_01_M00932 TRANSFAC + 36401209 36401221 9.0E-06 GCGGGGCGGGGCT 13 V_BARX1_01_M01340 TRANSFAC - 36402013 36402028 1.0E-06 TAAATAATTACCATAT 16 V_HOXD10_01_M01375 TRANSFAC - 36401476 36401492 1.0E-06 ACTGCAATAAAAATTCT 17 V_IRXB3_01_M01377 TRANSFAC - 36398984 36399000 8.0E-06 TTAATTCATGTTACATT 17 V_RNF96_01_M01199 TRANSFAC + 36400633 36400642 7.0E-06 GCCCGCGGCC 10 V_BRF1_01_M01747 TRANSFAC - 36401525 36401537 5.0E-06 GGGTTCGAACCTG 13 V_BRF1_01_M01747 TRANSFAC + 36401526 36401538 5.0E-06 AGGTTCGAACCCA 13 V_TCF3_05_M02920 TRANSFAC - 36401478 36401492 6.0E-06 ACTGCAATAAAAATT 15 V_DEC_Q1_M00997 TRANSFAC - 36401454 36401466 8.0E-06 GGCCACGTGAATG 13 V_GLIS2_04_M02863 TRANSFAC - 36399285 36399298 5.0E-06 AATATAAAAAAAGT 14 V_AR_Q6_M00962 TRANSFAC + 36398959 36398967 6.0E-06 TGAGCACAA 9 V_MIF1_01_M00279 TRANSFAC + 36402126 36402143 9.0E-06 AAGGTGTTTAGCAACTGC 18 V_FOXK1_03_M02752 TRANSFAC - 36399086 36399102 9.0E-06 GAAGAGTAAACAAGATG 17 V_HOXB5_01_M01319 TRANSFAC - 36402013 36402028 4.0E-06 TAAATAATTACCATAT 16 V_SMAD1_01_M01590 TRANSFAC + 36400071 36400082 1.0E-05 CAACACAAAGAA 12 V_SMAD1_01_M01590 TRANSFAC + 36401599 36401610 9.0E-06 AAGAACAAAGAT 12 V_SOX9_Q4_M01284 TRANSFAC - 36401168 36401178 4.0E-06 AAACAAAGGGG 11 V_SPI1_02_M02043 TRANSFAC + 36401590 36401599 8.0E-06 AGGGGAAATA 10 V_HOX13_02_M01452 TRANSFAC + 36402015 36402030 3.0E-06 ATGGTAATTATTTATG 16 V_NANOG_02_M01247 TRANSFAC + 36400067 36400086 0.0E+00 TTTGCAACACAAAGAAAAAT 20 V_NANOG_02_M01247 TRANSFAC + 36401595 36401614 8.0E-06 AAATAAGAACAAAGATTGAA 20 V_OCT4_01_M01125 TRANSFAC - 36398903 36398917 7.0E-06 AATTCTTATGATAAA 15 V_OCT4_01_M01125 TRANSFAC + 36399049 36399063 4.0E-06 CATTATGATGCTAAC 15 V_OCT4_01_M01125 TRANSFAC - 36400066 36400080 3.0E-06 CTTTGTGTTGCAAAA 15 V_HOXC8_01_M01321 TRANSFAC + 36402013 36402028 2.0E-06 ATATGGTAATTATTTA 16 V_HOXC8_01_M01321 TRANSFAC - 36402015 36402030 3.0E-06 CATAAATAATTACCAT 16 V_IPF1_06_M01438 TRANSFAC - 36402013 36402028 4.0E-06 TAAATAATTACCATAT 16 V_IPF1_06_M01438 TRANSFAC + 36402015 36402030 6.0E-06 ATGGTAATTATTTATG 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.