Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

GDF7 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 151449 growth differentiation factor 7 chr2 + 20861423 - 20866923 20866423 Transcription Factor Binding Sites   Download all TFBS in the GDF7 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR + 20861411 20861429 0.0E+00 TAACCAGCAGATGGCAGTG 7 CTCF_MA0139.1 JASPAR + 20866824 20866842 3.0E-06 CTTTCAGCAGGGGGCGCTG 19 NF-kappaB_MA0061.1 JASPAR + 20866944 20866953 6.0E-06 GGGACTTCCC 10 En1_MA0027.1 JASPAR + 20863183 20863193 2.0E-06 AAGTTGTTTTC 11 EWSR1-FLI1_MA0149.1 JASPAR - 20861509 20861526 6.0E-06 GAGAAGAAGGGAGAAAGG 18 EWSR1-FLI1_MA0149.1 JASPAR + 20865104 20865121 3.0E-06 GGGGGAAAGGAAGCCAAG 18 HOXD11_homeodomain_DBD_monomeric_10_1 SELEX - 20866255 20866264 8.0E-06 GTCGTAAAAG 10 Klf4_MA0039.2 JASPAR - 20861572 20861581 1.0E-05 TGGGCGTGGC 10 CTCF_C2H2_full_monomeric_17_1 SELEX - 20866825 20866841 4.0E-06 AGCGCCCCCTGCTGAAA 17 SP1_C2H2_DBD_monomeric_11_1 SELEX - 20866858 20866868 7.0E-06 ACCCCACCCCC 11 Hoxd9_homeodomain_DBD_monomeric_9_2 SELEX - 20866256 20866264 2.0E-06 GTCGTAAAA 9 Hic1_C2H2_DBD_dimeric_18_1 SELEX - 20867925 20867942 5.0E-06 ATACCTGGTTATGCCACC 18 RREB1_MA0073.1 JASPAR - 20867971 20867990 0.0E+00 ACACAAACCACCACCACCCA 20 RREB1_MA0073.1 JASPAR - 20867975 20867994 4.0E-06 ACACACACAAACCACCACCA 20 V_NFKB_C_M00208 TRANSFAC + 20866943 20866954 5.0E-06 GGGGACTTCCCG 12 V_KLF15_Q2_M01714 TRANSFAC + 20866732 20866745 7.0E-06 GGGTGGGGGCGTAG 14 V_FOXP3_Q4_M00992 TRANSFAC + 20864917 20864933 9.0E-06 AAACGTTTGTCACTGGC 17 V_EBF_Q6_M00977 TRANSFAC + 20865849 20865859 3.0E-06 TTCCCCTGAGA 11 V_FOXO3A_Q1_M01137 TRANSFAC - 20863183 20863194 1.0E-06 TGAAAACAACTT 12 V_P50P50_Q3_M01223 TRANSFAC + 20866942 20866954 2.0E-06 GGGGGACTTCCCG 13 V_IRF3_05_M02767 TRANSFAC - 20865780 20865793 7.0E-06 TAGATCGGAAACTT 14 V_MAF_Q6_M00648 TRANSFAC - 20866899 20866914 1.0E-06 ATGGGGGAAGTGTGCG 16 V_FOXJ1_03_M02750 TRANSFAC + 20864908 20864923 8.0E-06 GTAATCAACAAACGTT 16 V_GKLF_02_M01588 TRANSFAC + 20861572 20861583 1.0E-06 GCCACGCCCAGC 12 V_SP1_02_M01303 TRANSFAC + 20866794 20866804 5.0E-06 GGGGTGGGGGG 11 V_SP1_02_M01303 TRANSFAC + 20866859 20866869 5.0E-06 GGGGTGGGGTG 11 V_COUPTF_Q6_M01036 TRANSFAC - 20866270 20866292 9.0E-06 GTAAGAGACCTTTGGACGCGGAC 23 V_ETS_Q4_M00771 TRANSFAC - 20863122 20863133 5.0E-06 AATTGCTTCCTG 12 V_ZNF219_01_M01122 TRANSFAC - 20866795 20866806 2.0E-06 CGCCCCCCACCC 12 V_FOXA2_02_M02853 TRANSFAC - 20863129 20863143 9.0E-06 AATCATAACAAATTG 15 V_ZFP105_03_M02827 TRANSFAC + 20864907 20864921 5.0E-06 TGTAATCAACAAACG 15 V_SP4_03_M02810 TRANSFAC - 20866557 20866573 8.0E-06 ACACCCGCCCCCTCCCT 17 V_NFKB_Q6_M00194 TRANSFAC + 20866942 20866955 6.0E-06 GGGGGACTTCCCGG 14 V_FOXK1_04_M02856 TRANSFAC - 20863131 20863145 3.0E-06 TGAATCATAACAAAT 15 V_MAZ_Q6_01_M02023 TRANSFAC + 20866858 20866871 4.0E-06 GGGGGTGGGGTGGG 14 V_EGR1_Q6_M01873 TRANSFAC - 20867050 20867059 4.0E-06 GCGGGGGCGG 10 V_PAX5_01_M00143 TRANSFAC + 20863136 20863163 6.0E-06 TTATGATTCAGGCATGCATGGCAAGTTG 28 V_ISRE_01_M00258 TRANSFAC + 20865780 20865794 1.0E-05 AAGTTTCCGATCTAG 15 V_HOX13_01_M00023 TRANSFAC + 20866900 20866929 1.0E-06 GCACACTTCCCCCATTATTAAACACTATGT 30 V_SP1SP3_Q4_M01219 TRANSFAC - 20866559 20866569 1.0E-06 CCGCCCCCTCC 11 V_SP1SP3_Q4_M01219 TRANSFAC - 20866756 20866766 5.0E-06 CCGCCTCCTCC 11 V_GR_Q6_M00192 TRANSFAC + 20866916 20866934 1.0E-06 ATTAAACACTATGTTCAAA 19 V_MEF2_04_M00233 TRANSFAC + 20863157 20863178 7.0E-06 CAAGTTGGCTTAAATAATAACC 22 V_ZIC3_05_M02941 TRANSFAC + 20865122 20865136 4.0E-06 TAACACAGTAGGACC 15 V_RREB1_01_M00257 TRANSFAC - 20867977 20867990 1.0E-06 ACACAAACCACCAC 14 V_HNF4A_Q6_01_M02016 TRANSFAC + 20866276 20866290 3.0E-06 GTCCAAAGGTCTCTT 15 V_POU6F1_01_M00465 TRANSFAC + 20863164 20863174 3.0E-06 GCTTAAATAAT 11 V_CTCF_02_M01259 TRANSFAC + 20861408 20861427 0.0E+00 AAGTAACCAGCAGATGGCAG 5 V_CTCF_02_M01259 TRANSFAC + 20866821 20866840 6.0E-06 GAGCTTTCAGCAGGGGGCGC 20 V_CTCF_01_M01200 TRANSFAC + 20861410 20861429 0.0E+00 GTAACCAGCAGATGGCAGTG 7 V_CTCF_01_M01200 TRANSFAC + 20866823 20866842 7.0E-06 GCTTTCAGCAGGGGGCGCTG 20 V_NEUROD_02_M01288 TRANSFAC + 20870370 20870381 1.0E-06 CTGCTGCTGTCC 12 V_PTF1BETA_Q6_M00657 TRANSFAC - 20865841 20865854 7.0E-06 GGGGAACGCGCAGG 14 V_AP4_01_M00005 TRANSFAC + 20870443 20870460 8.0E-06 TCGGTCAGCGCTGGGAGG 18 V_TAL1_01_M01591 TRANSFAC + 20861517 20861529 4.0E-06 CCTTCTTCTCTGT 13 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC + 20866730 20866738 8.0E-06 GAGGGTGGG 9 V_FOXJ3_06_M02855 TRANSFAC - 20863129 20863145 6.0E-06 TGAATCATAACAAATTG 17 V_FOXJ3_06_M02855 TRANSFAC + 20865073 20865089 8.0E-06 AACACCCAAACACTGCG 17 V_NANOG_01_M01123 TRANSFAC - 20867904 20867915 6.0E-06 AGGGCCATTTAC 12 V_ZFP161_04_M02933 TRANSFAC - 20866454 20866467 8.0E-06 GCCGCGCAGAGAGA 14 V_NFKAPPAB_01_M00054 TRANSFAC + 20866944 20866953 7.0E-06 GGGACTTCCC 10 V_EWSR1FLI1_01_M02252 TRANSFAC - 20861509 20861526 6.0E-06 GAGAAGAAGGGAGAAAGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 20865104 20865121 3.0E-06 GGGGGAAAGGAAGCCAAG 18 V_HNF1A_Q5_M02013 TRANSFAC - 20863168 20863178 8.0E-06 GGTTATTATTT 11 V_PAX1_B_M00326 TRANSFAC + 20865673 20865690 8.0E-06 CCGACCCAGTCTAGATTT 18 V_MEF2_01_M00006 TRANSFAC + 20863165 20863180 2.0E-06 CTTAAATAATAACCCC 16 V_MEF2_01_M00006 TRANSFAC - 20863182 20863197 7.0E-06 ATCTGAAAACAACTTT 16 V_UF1H3BETA_Q6_M01068 TRANSFAC + 20866855 20866868 4.0E-06 GGCGGGGGTGGGGT 14 V_HMEF2_Q6_M00406 TRANSFAC + 20863165 20863180 8.0E-06 CTTAAATAATAACCCC 16 V_BRN3C_01_M01408 TRANSFAC - 20863163 20863178 7.0E-06 GGTTATTATTTAAGCC 16 V_EHF_07_M02849 TRANSFAC + 20865778 20865793 1.0E-05 GAAAGTTTCCGATCTA 16 V_RNF96_01_M01199 TRANSFAC - 20866883 20866892 7.0E-06 GCCCGCGGCC 10 V_RNF96_01_M01199 TRANSFAC - 20867164 20867173 7.0E-06 GCCCGCAGCC 10 V_ATATA_B_M00311 TRANSFAC - 20863164 20863173 3.0E-06 TTATTTAAGC 10 V_GLIS2_04_M02863 TRANSFAC - 20863164 20863177 8.0E-06 GTTATTATTTAAGC 14 V_PAX4_04_M00380 TRANSFAC + 20863169 20863198 5.0E-06 AATAATAACCCCAAAAGTTGTTTTCAGATC 30

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.