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ALS2CR11 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 151254 amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 11 chr2 - 202483405 - 202488905 202483905 Transcription Factor Binding Sites   Download all TFBS in the ALS2CR11 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HOXD12_homeodomain_DBD_monomeric_9_1 SELEX + 202486459 202486467 4.0E-06 GCAATAAAA 9 HSF2_HSF_DBD_trimeric_13_1 SELEX + 202484200 202484212 0.0E+00 TTCTAGAAGATTT 13 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX + 202486459 202486468 7.0E-06 GCAATAAAAG 10 SOX4_HMG_DBD_dimeric_16_1 SELEX + 202484205 202484220 6.0E-06 GAAGATTTACAGTGTC 16 SOX10_HMG_full_dimeric_15_3 SELEX - 202487198 202487212 1.0E-06 ATGGATTTCAGTCAC 15 SOX21_HMG_DBD_dimeric_13_2 SELEX - 202487199 202487211 4.0E-06 TGGATTTCAGTCA 13 Zfp652_C2H2_DBD_monomeric_13_1 SELEX + 202486208 202486220 9.0E-06 TCAATGAGTTAAA 13 FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 202486107 202486123 6.0E-06 TTAAAGAAATGAAAACT 17 HSF1_HSF_full_trimeric_13_1 SELEX + 202484200 202484212 5.0E-06 TTCTAGAAGATTT 13 SOX9_HMG_full_dimeric_17_3 SELEX - 202487197 202487213 1.0E-06 AATGGATTTCAGTCACA 17 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX + 202483924 202483935 8.0E-06 GCCTTTCTCACA 12 EWSR1-FLI1_MA0149.1 JASPAR - 202487110 202487127 7.0E-06 GAAAGGAAGGCAGCTCTG 18 EWSR1-FLI1_MA0149.1 JASPAR - 202487114 202487131 9.0E-06 CCAAGAAAGGAAGGCAGC 18 SOX7_HMG_full_dimeric_17_2 SELEX - 202487197 202487213 1.0E-06 AATGGATTTCAGTCACA 17 Pax4_MA0068.1 JASPAR + 202486298 202486327 4.0E-06 GAAAAAAAGCGAATCCCATAAAATTACATA 30 TCF7L1_HMG_full_monomeric_12_1 SELEX + 202487335 202487346 9.0E-06 AGACATAAAAGG 12 LEF1_HMG_DBD_monomeric_15_1 SELEX + 202487335 202487349 6.0E-06 AGACATAAAAGGCTT 15 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX + 202486458 202486467 2.0E-06 GGCAATAAAA 10 RUNX2_RUNX_DBD_monomeric_9_1 SELEX - 202487188 202487196 1.0E-05 TAACCACAA 9 SOX8_HMG_full_dimeric_13_1 SELEX - 202487200 202487212 1.0E-06 ATGGATTTCAGTC 13 Sox17_HMG_DBD_dimeric_15_2 SELEX - 202487198 202487212 8.0E-06 ATGGATTTCAGTCAC 15 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX + 202486459 202486467 3.0E-06 GCAATAAAA 9 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX + 202486312 202486321 5.0E-06 CCCATAAAAT 10 SOX2_HMG_full_dimeric_15_1 SELEX - 202487198 202487212 9.0E-06 ATGGATTTCAGTCAC 15 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX + 202486291 202486304 7.0E-06 ATCAACAGAAAAAA 14 NR2E1_nuclearreceptor_full_dimeric_14_1 SELEX + 202486205 202486218 8.0E-06 AGGTCAATGAGTTA 14 HSF4_HSF_DBD_trimeric_13_1 SELEX + 202484200 202484212 5.0E-06 TTCTAGAAGATTT 13 HOXC11_homeodomain_full_monomeric_11_2 SELEX + 202486458 202486468 3.0E-06 GGCAATAAAAG 11 FOXB1_forkhead_DBD_putative-multimer_14_1 SELEX + 202487578 202487591 7.0E-06 TGATGACACGGCTC 14 FOXI1_MA0042.1 JASPAR - 202486219 202486230 7.0E-06 TTTTGTTTGGTT 12 NFATC1_NFAT_full_dimeric_20_1 SELEX + 202486114 202486133 2.0E-06 AATGAAAACTTAATGTTCAC 20 ESRRG_nuclearreceptor_full_monomeric_10_1 SELEX + 202487250 202487259 1.0E-05 GCAAGGTCAT 10 Tcf7_HMG_DBD_monomeric_12_1 SELEX + 202487335 202487346 9.0E-06 AGACATAAAAGG 12 HOXA13_homeodomain_full_monomeric_10_1 SELEX + 202486312 202486321 1.0E-05 CCCATAAAAT 10 Uncx_homeodomain_DBD_dimeric_13_1 SELEX + 202486332 202486344 9.0E-06 ATGATTCAATTTA 13 Esrra_nuclearreceptor_DBD_monomeric_11_1 SELEX + 202487249 202487259 4.0E-06 TGCAAGGTCAT 11 Hoxd9_homeodomain_DBD_monomeric_9_1 SELEX + 202486312 202486320 2.0E-06 CCCATAAAA 9 Hltf_MA0109.1 JASPAR - 202486462 202486471 6.0E-06 ATACTTTTAT 10 GSC_homeodomain_full_monomeric_10_1 SELEX - 202487491 202487500 2.0E-06 CCTAATCCCT 10 MEOX2_homeodomain_DBD_dimeric_17_1 SELEX - 202487427 202487443 8.0E-06 ATGATTAAGGTTATGAA 17 DUXA_homeodomain_DBD_dimeric_13_1 SELEX - 202486332 202486344 9.0E-06 TAAATTGAATCAT 13 ESRRB_nuclearreceptor_DBD_monomeric_11_1 SELEX + 202487250 202487260 1.0E-05 GCAAGGTCATC 11 SOX18_HMG_full_dimeric_15_3 SELEX - 202487198 202487212 8.0E-06 ATGGATTTCAGTCAC 15 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX + 202486312 202486321 8.0E-06 CCCATAAAAT 10 Sox11_HMG_DBD_dimeric_15_1 SELEX + 202484206 202484220 6.0E-06 AAGATTTACAGTGTC 15 Sox3_HMG_DBD_dimeric_17_3 SELEX - 202487197 202487213 3.0E-06 AATGGATTTCAGTCACA 17 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX + 202486458 202486468 7.0E-06 GGCAATAAAAG 11 CDX2_homeodomain_DBD_monomeric_9_1 SELEX + 202486459 202486467 3.0E-06 GCAATAAAA 9 CDX1_homeodomain_DBD_monomeric_9_1 SELEX + 202486459 202486467 3.0E-06 GCAATAAAA 9 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX + 202486458 202486468 6.0E-06 GGCAATAAAAG 11 RORA_2_MA0072.1 JASPAR + 202486198 202486211 7.0E-06 CTTCAATAGGTCAA 14 HOXB13_homeodomain_DBD_monomeric_10_1 SELEX + 202486312 202486321 4.0E-06 CCCATAAAAT 10 SOX9_HMG_full_dimeric_17_1 SELEX + 202484205 202484221 9.0E-06 GAAGATTTACAGTGTCA 17 V_RUSH1A_02_M01107 TRANSFAC - 202486462 202486471 6.0E-06 ATACTTTTAT 10 V_HOXA9_01_M01351 TRANSFAC + 202486309 202486325 1.0E-06 AATCCCATAAAATTACA 17 V_HOXA9_01_M01351 TRANSFAC + 202486456 202486472 1.0E-06 ATGGCAATAAAAGTATT 17 V_FOXP1_01_M00987 TRANSFAC - 202486223 202486242 2.0E-06 TTCCTTTTACTGTTTTGTTT 20 V_CEBPG_Q6_M00622 TRANSFAC - 202486469 202486481 8.0E-06 CTGACTTAAAATA 13 V_AP1_Q2_M00173 TRANSFAC + 202486271 202486281 4.0E-06 GATGACTCAGA 11 V_XVENT1_01_M00445 TRANSFAC + 202483825 202483837 0.0E+00 GGCCTATTTGTCT 13 V_LEF1_04_M02774 TRANSFAC + 202487570 202487586 5.0E-06 TTTCTCTTTGATGACAC 17 V_AML_Q6_M00769 TRANSFAC - 202487326 202487340 1.0E-06 ATGTCTGTGGTCAGA 15 V_BCL6_Q3_01_M02085 TRANSFAC + 202484198 202484207 0.0E+00 CTTTCTAGAA 10 V_EVI1_05_M00082 TRANSFAC - 202487437 202487447 6.0E-06 AGATATGATTA 11 V_MYB_03_M02883 TRANSFAC - 202486052 202486067 1.0E-06 TTACAAACTGCCAAGC 16 V_NKX29_01_M01352 TRANSFAC + 202486462 202486478 6.0E-06 ATAAAAGTATTTTAAGT 17 V_BCL6_01_M01183 TRANSFAC - 202486465 202486480 2.0E-06 TGACTTAAAATACTTT 16 V_AML3_Q6_M01856 TRANSFAC - 202487188 202487195 1.0E-05 AACCACAA 8 V_TCF4_Q5_01_M02033 TRANSFAC - 202487572 202487581 7.0E-06 ATCAAAGAGA 10 V_AR_Q6_01_M01996 TRANSFAC + 202485782 202485796 2.0E-06 GCTCACTCTGTTCTT 15 V_CBF_02_M01080 TRANSFAC + 202487184 202487199 7.0E-06 TTCCTTGTGGTTATGT 16 V_RORA_Q4_M01138 TRANSFAC + 202486200 202486210 1.0E-05 TCAATAGGTCA 11 V_IRF_Q6_01_M00972 TRANSFAC + 202486111 202486121 8.0E-06 AGAAATGAAAA 11 V_CEBP_C_M00201 TRANSFAC + 202483813 202483830 9.0E-06 AGTGTGCTGAAAGGCCTA 18 V_GTF2IRD1_01_M01229 TRANSFAC + 202487492 202487500 7.0E-06 GGGATTAGG 9 V_SOX11_04_M02899 TRANSFAC - 202486684 202486697 3.0E-06 AAAATTGTTTGACT 14 V_CEBP_Q2_M00190 TRANSFAC - 202485804 202485817 9.0E-06 ATGTTGCATAACAT 14 V_HNF3_Q6_01_M01012 TRANSFAC - 202486220 202486237 5.0E-06 TTTACTGTTTTGTTTGGT 18 V_PU1_Q4_M01172 TRANSFAC - 202486233 202486251 5.0E-06 ATAGTTCATTTCCTTTTAC 19 V_HOXD13_01_M01404 TRANSFAC + 202486309 202486324 1.0E-06 AATCCCATAAAATTAC 16 V_MYBL1_04_M02884 TRANSFAC - 202486053 202486067 9.0E-06 TTACAAACTGCCAAG 15 V_CDX_Q5_M00991 TRANSFAC + 202486220 202486237 1.0E-05 ACCAAACAAAACAGTAAA 18 V_CDX_Q5_M00991 TRANSFAC - 202486329 202486346 6.0E-06 TATAAATTGAATCATACA 18 V_CDX_Q5_M00991 TRANSFAC + 202486331 202486348 6.0E-06 TATGATTCAATTTATAAC 18 V_CDX_Q5_M00991 TRANSFAC - 202487427 202487444 7.0E-06 TATGATTAAGGTTATGAA 18 V_HOXC13_01_M01317 TRANSFAC + 202486308 202486323 5.0E-06 GAATCCCATAAAATTA 16 V_MEF2A_Q6_M02024 TRANSFAC + 202486469 202486478 6.0E-06 TATTTTAAGT 10 V_AR_03_M00956 TRANSFAC + 202485775 202485801 5.0E-06 TCCAGCAGCTCACTCTGTTCTTAGGGT 27 V_AP1_Q6_M00174 TRANSFAC + 202486271 202486281 4.0E-06 GATGACTCAGA 11 RXRA_VDR_MA0074.1 JASPAR + 202486205 202486219 5.0E-06 AGGTCAATGAGTTAA 15 V_TCF3_04_M02816 TRANSFAC - 202487570 202487586 5.0E-06 GTGTCATCAAAGAGAAA 17 V_POU3F2_01_M00463 TRANSFAC - 202486332 202486345 3.0E-06 ATAAATTGAATCAT 14 V_OCT1_03_M00137 TRANSFAC + 202486482 202486494 1.0E-05 TGAGTAATGAGAA 13 V_HOXB13_01_M01467 TRANSFAC + 202486309 202486324 0.0E+00 AATCCCATAAAATTAC 16 V_GATA3_05_M02859 TRANSFAC - 202487432 202487453 6.0E-06 ATTTGCAGATATGATTAAGGTT 22 V_TEF_Q6_M00672 TRANSFAC + 202486126 202486137 2.0E-06 ATGTTCACACAA 12 V_SOX8_04_M02912 TRANSFAC - 202486142 202486155 7.0E-06 ACATTCATGTGCAA 14 V_NKX61_01_M00424 TRANSFAC - 202486315 202486327 1.0E-05 TATGTAATTTTAT 13 V_XFD3_01_M00269 TRANSFAC - 202486123 202486136 7.0E-06 TGTGTGAACATTAA 14 V_AML2_01_M01759 TRANSFAC - 202487188 202487195 1.0E-05 AACCACAA 8 V_CEBPB_02_M00117 TRANSFAC - 202485804 202485817 3.0E-06 ATGTTGCATAACAT 14 V_AP1_Q6_01_M00925 TRANSFAC + 202486272 202486280 7.0E-06 ATGACTCAG 9 V_HOXB9_01_M01426 TRANSFAC + 202486309 202486324 9.0E-06 AATCCCATAAAATTAC 16 V_HOXB9_01_M01426 TRANSFAC + 202486456 202486471 6.0E-06 ATGGCAATAAAAGTAT 16 V_ARID3A_02_M02839 TRANSFAC + 202487302 202487316 2.0E-06 AGCAATATCATAACT 15 V_CDX2_01_M01449 TRANSFAC + 202486455 202486470 2.0E-06 GATGGCAATAAAAGTA 16 V_EVI1_01_M00078 TRANSFAC + 202487395 202487410 6.0E-06 GGATAATACAGGATAA 16 V_IRF_Q6_M00772 TRANSFAC - 202486111 202486125 4.0E-06 TAAGTTTTCATTTCT 15 V_CDX2_Q5_M00729 TRANSFAC - 202486458 202486471 0.0E+00 ATACTTTTATTGCC 14 V_HNF1_Q6_01_M01011 TRANSFAC + 202486480 202486500 1.0E-05 AGTGAGTAATGAGAAACCATG 21 V_ELF5_01_M01197 TRANSFAC + 202486235 202486245 6.0E-06 AAAAGGAAATG 11 V_CDX1_01_M01373 TRANSFAC + 202486455 202486470 1.0E-06 GATGGCAATAAAAGTA 16 V_OCT1_04_M00138 TRANSFAC + 202486107 202486129 5.0E-06 TTAAAGAAATGAAAACTTAATGT 23 V_GR_Q6_M00192 TRANSFAC + 202485779 202485797 1.0E-06 GCAGCTCACTCTGTTCTTA 19 V_MEF2_04_M00233 TRANSFAC - 202486243 202486264 9.0E-06 GTTGTGTGTATCAATAGTTCAT 22 V_PEBP_Q6_M00984 TRANSFAC + 202487326 202487340 3.0E-06 TCTGACCACAGACAT 15 V_TCF7_03_M02817 TRANSFAC - 202487570 202487586 4.0E-06 GTGTCATCAAAGAGAAA 17 V_PBX1_05_M01967 TRANSFAC - 202486530 202486543 4.0E-06 CTAGATTGACATGC 14 V_AP1_C_M00199 TRANSFAC + 202486272 202486280 6.0E-06 ATGACTCAG 9 V_OCAB_Q6_M02113 TRANSFAC + 202487444 202487454 1.0E-06 ATCTGCAAATC 11 V_PNR_01_M01650 TRANSFAC - 202487312 202487325 1.0E-06 GAGGTCAGAAGTTA 14 V_NKX3A_01_M00451 TRANSFAC + 202486462 202486473 5.0E-06 ATAAAAGTATTT 12 V_SRF_03_M01304 TRANSFAC - 202487121 202487133 6.0E-06 AGCCAAGAAAGGA 13 V_BLIMP1_Q6_M01066 TRANSFAC - 202486082 202486097 3.0E-06 CCAGGAGTGAAACTGA 16 V_ISGF4G_04_M02875 TRANSFAC + 202486225 202486238 7.0E-06 ACAAAACAGTAAAA 14 V_MAF_Q6_01_M00983 TRANSFAC - 202486272 202486282 4.0E-06 TTCTGAGTCAT 11 V_HOXD9_Q2_M01834 TRANSFAC + 202487335 202487344 4.0E-06 AGACATAAAA 10 V_GR_Q6_02_M01836 TRANSFAC + 202485785 202485797 2.0E-06 CACTCTGTTCTTA 13 V_AP1_Q4_01_M00926 TRANSFAC - 202486272 202486279 1.0E-05 TGAGTCAT 8 V_TAL1_01_M01591 TRANSFAC + 202487347 202487359 1.0E-06 CTTTCTTCTCTGC 13 V_ZBTB3_03_M02825 TRANSFAC - 202486434 202486450 8.0E-06 TGAAGCACTGCACTGGG 17 V_FOXL1_02_M02857 TRANSFAC + 202486217 202486232 1.0E-06 TAAACCAAACAAAACA 16 V_LUN1_01_M00480 TRANSFAC + 202487151 202487167 8.0E-06 TCCTTGCTCATTTGGGA 17 V_FOXJ3_06_M02855 TRANSFAC + 202486216 202486232 2.0E-06 TTAAACCAAACAAAACA 17 V_NKX3A_02_M01383 TRANSFAC - 202487359 202487375 6.0E-06 TTATGAGTCCTTAAAAG 17 V_CBF_01_M01079 TRANSFAC + 202487184 202487199 7.0E-06 TTCCTTGTGGTTATGT 16 V_ZFP206_01_M01742 TRANSFAC + 202483901 202483911 1.0E-06 TGCGCAGGCGC 11 V_FRA1_Q5_M01267 TRANSFAC - 202486272 202486279 1.0E-05 TGAGTCAT 8 V_TBP_04_M02918 TRANSFAC + 202487416 202487430 3.0E-06 CCGTTTTAAGGTTCA 15 V_ESRRA_03_M02748 TRANSFAC + 202487247 202487263 5.0E-06 GCTGCAAGGTCATCACT 17 V_IRX2_01_M01405 TRANSFAC - 202486561 202486577 4.0E-06 AGAATTCATGTAACTTT 17 V_HSF2_02_M01244 TRANSFAC - 202484200 202484212 4.0E-06 AAATCTTCTAGAA 13 V_EWSR1FLI1_01_M02252 TRANSFAC - 202487110 202487127 7.0E-06 GAAAGGAAGGCAGCTCTG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 202487114 202487131 9.0E-06 CCAAGAAAGGAAGGCAGC 18 V_EFC_Q6_M00626 TRANSFAC + 202486711 202486724 4.0E-06 AAACACCAGGGAAA 14 V_SOX1_03_M02802 TRANSFAC - 202486331 202486346 5.0E-06 TATAAATTGAATCATA 16 V_HOXA10_01_M01464 TRANSFAC + 202486456 202486471 3.0E-06 ATGGCAATAAAAGTAT 16 V_SOX5_07_M02909 TRANSFAC - 202486684 202486700 2.0E-06 TCAAAAATTGTTTGACT 17 V_HOXD10_01_M01375 TRANSFAC + 202486309 202486325 0.0E+00 AATCCCATAAAATTACA 17 V_HOXD10_01_M01375 TRANSFAC + 202486456 202486472 2.0E-06 ATGGCAATAAAAGTATT 17 V_IRXB3_01_M01377 TRANSFAC - 202486561 202486577 8.0E-06 AGAATTCATGTAACTTT 17 V_BRCA_01_M01082 TRANSFAC - 202486293 202486300 1.0E-05 TTCTGTTG 8 V_VDRRXR_01_M01202 TRANSFAC + 202486205 202486219 5.0E-06 AGGTCAATGAGTTAA 15 V_AR_Q2_M00447 TRANSFAC + 202486118 202486132 2.0E-06 AAAACTTAATGTTCA 15 V_TR4_03_M01782 TRANSFAC - 202487312 202487324 5.0E-06 AGGTCAGAAGTTA 13 V_HSF1_Q6_01_M02017 TRANSFAC - 202484199 202484212 2.0E-06 AAATCTTCTAGAAA 14 V_TCF4_01_M01705 TRANSFAC + 202487574 202487582 5.0E-06 TCTTTGATG 9

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.