Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

FAM59B Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 150946 GRB2 associated, regulator of MAPK1-like chr2 + 26390959 - 26396459 26395959 Transcription Factor Binding Sites   Download all TFBS in the FAM59B promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU4F2_POU_full_monomeric_16_1 SELEX + 26401859 26401874 2.0E-06 ATGAATTAATAATGGC 16 CTCF_MA0139.1 JASPAR + 26394533 26394551 1.0E-06 TTACCTGCAGAGGGCGCCG 19 MSX2_homeodomain_DBD_dimeric_18_1 SELEX - 26401857 26401874 3.0E-06 GCCATTATTAATTCATTA 18 EN2_homeodomain_full_monomeric_10_1 SELEX + 26394528 26394537 5.0E-06 CCCAATTACC 10 BARX1_homeodomain_DBD_dimeric_17_1 SELEX - 26401857 26401873 0.0E+00 CCATTATTAATTCATTA 17 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 26395896 26395906 1.0E-05 GCCCCGCCCCC 11 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 26395909 26395919 1.0E-05 GCCCCGCCCCC 11 POU3F3_POU_DBD_monomeric_12_1 SELEX + 26401859 26401870 1.0E-06 ATGAATTAATAA 12 EMX2_homeodomain_DBD_dimeric_14_1 SELEX + 26401857 26401870 1.0E-06 TAATGAATTAATAA 14 EMX2_homeodomain_DBD_dimeric_14_1 SELEX - 26401857 26401870 5.0E-06 TTATTAATTCATTA 14 POU3F2_POU_DBD_monomeric_13_1 SELEX + 26401858 26401870 3.0E-06 AATGAATTAATAA 13 PDX1_homeodomain_DBD_dimeric_18_1 SELEX - 26401846 26401863 8.0E-06 TTCATTAGGAGAAATCAG 18 RFX4_RFX_DBD_dimeric_16_1 SELEX + 26402663 26402678 4.0E-06 GGATGCCATGGTTACA 16 KLF14_C2H2_DBD_monomeric_14_1 SELEX - 26395894 26395907 9.0E-06 GGCCCCGCCCCCTC 14 POU3F4_POU_DBD_monomeric_11_1 SELEX + 26401860 26401870 7.0E-06 TGAATTAATAA 11 EWSR1-FLI1_MA0149.1 JASPAR - 26402590 26402607 8.0E-06 GGAAGGAAGGGAGCCCTC 18 EWSR1-FLI1_MA0149.1 JASPAR - 26402594 26402611 0.0E+00 GGGAGGAAGGAAGGGAGC 18 Tcfap2a_TFAP_DBD_dimeric_13_1 SELEX - 26408048 26408060 8.0E-06 AGCCCTGGGGGCG 13 POU4F3_POU_DBD_monomeric_16_1 SELEX - 26401856 26401871 2.0E-06 ATTATTAATTCATTAG 16 POU4F3_POU_DBD_monomeric_16_1 SELEX + 26401859 26401874 0.0E+00 ATGAATTAATAATGGC 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 26402663 26402678 8.0E-06 GGATGCCATGGTTACA 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 26402663 26402678 4.0E-06 TGTAACCATGGCATCC 16 POU6F2_POU_DBD_dimeric_16_1 SELEX + 26401856 26401871 1.0E-06 CTAATGAATTAATAAT 16 POU6F2_POU_DBD_dimeric_16_1 SELEX - 26401856 26401871 1.0E-06 ATTATTAATTCATTAG 16 Lhx8_homeodomain_DBD_dimeric_18_1 SELEX + 26401846 26401863 8.0E-06 CTGATTTCTCCTAATGAA 18 ESR1_MA0112.2 JASPAR - 26402021 26402040 0.0E+00 AGGCCAGGTCTCCCTGACTC 20 SP1_MA0079.2 JASPAR - 26395890 26395899 9.0E-06 CCCCTCCTCC 10 SP1_MA0079.2 JASPAR - 26395896 26395905 7.0E-06 CCCCGCCCCC 10 SP1_MA0079.2 JASPAR - 26395909 26395918 7.0E-06 CCCCGCCCCC 10 SP1_MA0079.2 JASPAR - 26396905 26396914 3.0E-06 CCCCTCCCCC 10 SP1_MA0079.2 JASPAR + 26397080 26397089 9.0E-06 CCCCTCCTCC 10 SP1_MA0079.2 JASPAR - 26401745 26401754 3.0E-06 CCCCTCCCCC 10 SP1_MA0079.2 JASPAR - 26402449 26402458 9.0E-06 CCCCTCCTCC 10 HIC2_C2H2_DBD_monomeric_9_1 SELEX - 26402748 26402756 4.0E-06 ATGCCCACT 9 NFAT5_NFAT_DBD_dimeric_14_1 SELEX - 26402181 26402194 6.0E-06 ATGGAAACATCCTA 14 SP4_C2H2_full_monomeric_17_1 SELEX - 26395893 26395909 6.0E-06 CGGGCCCCGCCCCCTCC 17 RFX2_RFX_DBD_dimeric_16_1 SELEX + 26402663 26402678 7.0E-06 GGATGCCATGGTTACA 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 26402663 26402678 7.0E-06 TGTAACCATGGCATCC 16 Msx3_homeodomain_DBD_dimeric_18_1 SELEX - 26401857 26401874 3.0E-06 GCCATTATTAATTCATTA 18 POU1F1_POU_DBD_monomeric_17_1 SELEX + 26401856 26401872 0.0E+00 CTAATGAATTAATAATG 17 EN1_homeodomain_full_dimeric_14_1 SELEX + 26401857 26401870 8.0E-06 TAATGAATTAATAA 14 EN1_homeodomain_full_dimeric_14_1 SELEX - 26401857 26401870 4.0E-06 TTATTAATTCATTA 14 POU3F1_POU_DBD_monomeric_12_2 SELEX + 26401859 26401870 1.0E-06 ATGAATTAATAA 12 Myf_MA0055.1 JASPAR - 26397720 26397731 1.0E-05 CACCAACAGCTG 12 GBX2_homeodomain_DBD_dimeric_14_1 SELEX + 26401857 26401870 8.0E-06 TAATGAATTAATAA 14 GBX2_homeodomain_DBD_dimeric_14_1 SELEX - 26401857 26401870 5.0E-06 TTATTAATTCATTA 14 REST_MA0138.2 JASPAR + 26397781 26397801 0.0E+00 GCTAGGACCCAGGACAGCTCT 21 EMX1_homeodomain_DBD_dimeric_14_1 SELEX + 26401857 26401870 3.0E-06 TAATGAATTAATAA 14 EMX1_homeodomain_DBD_dimeric_14_1 SELEX - 26401857 26401870 9.0E-06 TTATTAATTCATTA 14 MSX1_homeodomain_DBD_dimeric_18_1 SELEX - 26401857 26401874 2.0E-06 GCCATTATTAATTCATTA 18 POU4F1_POU_DBD_monomeric_14_1 SELEX - 26401858 26401871 7.0E-06 ATTATTAATTCATT 14 POU4F1_POU_DBD_monomeric_14_1 SELEX + 26401859 26401872 0.0E+00 ATGAATTAATAATG 14 RREB1_MA0073.1 JASPAR - 26402793 26402812 7.0E-06 ACACACAACCCCCACCCCCG 20 RREB1_MA0073.1 JASPAR - 26402795 26402814 3.0E-06 CCACACACAACCCCCACCCC 20 PAX7_PAX_full_dimeric_10_1 SELEX + 26401857 26401866 8.0E-06 TAATGAATTA 10 V_AP2ALPHA_Q6_M01857 TRANSFAC - 26397043 26397053 9.0E-06 AGCCTGCGGCC 11 V_TST1_02_M01316 TRANSFAC - 26401853 26401869 5.0E-06 TATTAATTCATTAGGAG 17 V_TST1_02_M01316 TRANSFAC + 26401854 26401870 1.0E-06 TCCTAATGAATTAATAA 17 V_TST1_02_M01316 TRANSFAC - 26401857 26401873 2.0E-06 CCATTATTAATTCATTA 17 V_TST1_02_M01316 TRANSFAC + 26401858 26401874 9.0E-06 AATGAATTAATAATGGC 17 V_DBX1_01_M01483 TRANSFAC + 26401857 26401873 0.0E+00 TAATGAATTAATAATGG 17 V_ZFP187_03_M02830 TRANSFAC + 26401857 26401870 4.0E-06 TAATGAATTAATAA 14 V_USF_Q6_M00187 TRANSFAC - 26395947 26395956 2.0E-06 GTCACGTGGC 10 V_HSF1_Q6_M01023 TRANSFAC - 26395384 26395400 1.0E-06 CTTCCAGGACCTTCATC 17 V_OBOX5_05_M03066 TRANSFAC + 26402219 26402235 1.0E-06 CAGAGAGATTAAATAAT 17 V_MAX_Q6_M01830 TRANSFAC + 26395944 26395955 1.0E-06 CCGGCCACGTGA 12 V_NRSF_Q4_M01028 TRANSFAC + 26407654 26407672 4.0E-06 CTGCACTTCCTGCTGCTCA 19 V_OBOX1_01_M01450 TRANSFAC + 26402218 26402234 9.0E-06 CCAGAGAGATTAAATAA 17 V_ESR1_01_M02261 TRANSFAC - 26402021 26402040 0.0E+00 AGGCCAGGTCTCCCTGACTC 20 V_PAX4_03_M00378 TRANSFAC - 26402795 26402806 3.0E-06 AACCCCCACCCC 12 V_AML3_Q6_M01856 TRANSFAC - 26397712 26397719 1.0E-05 AACCACAA 8 V_AML3_Q6_M01856 TRANSFAC - 26402775 26402782 1.0E-05 AACCACAA 8 V_IK_Q5_M01169 TRANSFAC - 26408127 26408136 1.0E-06 TTTGGGAGGG 10 V_SPDEF_04_M02915 TRANSFAC - 26402177 26402192 0.0E+00 GGAAACATCCTAGTTG 16 V_GABP_B_M00341 TRANSFAC - 26407655 26407666 3.0E-06 GCAGGAAGTGCA 12 V_SP1_Q6_01_M00931 TRANSFAC + 26395897 26395906 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC + 26395910 26395919 4.0E-06 GGGGCGGGGC 10 V_ZTA_Q2_M00711 TRANSFAC - 26397736 26397748 6.0E-06 TAATCATGGCTCA 13 V_EGR_Q6_M00807 TRANSFAC + 26395451 26395461 1.0E-05 GTGGGCGCGGC 11 V_GLI1_Q2_M01042 TRANSFAC + 26407206 26407215 6.0E-06 GACCACCAAG 10 V_POU1F1_Q6_M00744 TRANSFAC + 26401859 26401868 2.0E-06 ATGAATTAAT 10 V_IRF3_05_M02767 TRANSFAC - 26402185 26402198 3.0E-06 TAAAATGGAAACAT 14 V_SP1_03_M02281 TRANSFAC - 26395890 26395899 9.0E-06 CCCCTCCTCC 10 V_SP1_03_M02281 TRANSFAC - 26395896 26395905 7.0E-06 CCCCGCCCCC 10 V_SP1_03_M02281 TRANSFAC - 26395909 26395918 7.0E-06 CCCCGCCCCC 10 V_SP1_03_M02281 TRANSFAC - 26396905 26396914 3.0E-06 CCCCTCCCCC 10 V_SP1_03_M02281 TRANSFAC + 26397080 26397089 9.0E-06 CCCCTCCTCC 10 V_SP1_03_M02281 TRANSFAC - 26401745 26401754 3.0E-06 CCCCTCCCCC 10 V_SP1_03_M02281 TRANSFAC - 26402449 26402458 9.0E-06 CCCCTCCTCC 10 V_AP2_Q6_M00189 TRANSFAC + 26407916 26407927 2.0E-06 CTCCCGCCGGCG 12 V_OCTAMER_02_M01477 TRANSFAC + 26401855 26401871 9.0E-06 CCTAATGAATTAATAAT 17 V_OCTAMER_02_M01477 TRANSFAC - 26401856 26401872 9.0E-06 CATTATTAATTCATTAG 17 V_SP1_02_M01303 TRANSFAC - 26402065 26402075 8.0E-06 GGGGCGGGGGC 11 V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC + 26395473 26395488 1.0E-05 CAGCACGAGGGGGAGC 16 V_LYF1_01_M00141 TRANSFAC - 26408128 26408136 9.0E-06 TTTGGGAGG 9 V_PAX4_01_M00373 TRANSFAC - 26407216 26407236 3.0E-06 GGTGGTGAAGCGCGAGCGCTC 21 V_HMBOX1_01_M01456 TRANSFAC + 26407583 26407599 8.0E-06 ACAAGCTGGTTAGCATC 17 V_ZNF219_01_M01122 TRANSFAC - 26396907 26396918 0.0E+00 CACCCCCCTCCC 12 V_GC_01_M00255 TRANSFAC + 26395908 26395921 8.0E-06 CGGGGGCGGGGCCG 14 V_OBOX5_02_M01480 TRANSFAC + 26402219 26402235 1.0E-06 CAGAGAGATTAAATAAT 17 V_IPF1_Q4_M00436 TRANSFAC + 26402612 26402623 8.0E-06 GCAGTAATGACC 12 V_MYF_01_M01302 TRANSFAC - 26397720 26397731 1.0E-05 CACCAACAGCTG 12 V_ZBED6_01_M01598 TRANSFAC + 26407881 26407892 7.0E-06 CGGGCTCGCCCG 12 V_MRF2_01_M00454 TRANSFAC - 26397706 26397719 6.0E-06 AACCACAATAGCCC 14 V_SP4_03_M02810 TRANSFAC - 26395891 26395907 0.0E+00 GGCCCCGCCCCCTCCTC 17 V_AML2_01_M01759 TRANSFAC - 26397712 26397719 1.0E-05 AACCACAA 8 V_AML2_01_M01759 TRANSFAC - 26402775 26402782 1.0E-05 AACCACAA 8 V_KROX_Q6_M00982 TRANSFAC - 26395891 26395904 2.0E-06 CCCGCCCCCTCCTC 14 V_KROX_Q6_M00982 TRANSFAC + 26402062 26402075 2.0E-06 CCAGCCCCCGCCCC 14 V_KROX_Q6_M00982 TRANSFAC - 26402789 26402802 2.0E-06 CCCACCCCCGCCCC 14 V_ZBP89_Q4_M01816 TRANSFAC + 26402697 26402706 2.0E-06 TCCTCCCCCA 10 V_SP1_Q6_M00196 TRANSFAC + 26395895 26395907 0.0E+00 AGGGGGCGGGGCC 13 V_SP1_Q6_M00196 TRANSFAC + 26395908 26395920 1.0E-06 CGGGGGCGGGGCC 13 V_MAZ_Q6_01_M02023 TRANSFAC + 26396905 26396918 2.0E-06 GGGGGAGGGGGGTG 14 V_MAZ_Q6_01_M02023 TRANSFAC + 26401745 26401758 0.0E+00 GGGGGAGGGGAGGA 14 V_RFX4_04_M02893 TRANSFAC + 26402666 26402680 5.0E-06 TGCCATGGTTACATC 15 V_OBOX2_01_M01364 TRANSFAC + 26402218 26402234 4.0E-06 CCAGAGAGATTAAATAA 17 V_GADP_01_M01258 TRANSFAC - 26408101 26408112 3.0E-06 CGCTTCCGGCTC 12 V_YY1_Q6_02_M01035 TRANSFAC + 26402187 26402197 7.0E-06 GTTTCCATTTT 11 V_REST_01_M01256 TRANSFAC - 26397784 26397805 0.0E+00 TCTGAGAGCTGTCCTGGGTCCT 22 V_HBP1_03_M02762 TRANSFAC + 26401856 26401871 4.0E-06 CTAATGAATTAATAAT 16 V_SP1SP3_Q4_M01219 TRANSFAC - 26395890 26395900 1.0E-05 CCCCCTCCTCC 11 V_SP1SP3_Q4_M01219 TRANSFAC - 26395893 26395903 1.0E-06 CCGCCCCCTCC 11 V_SP1SP3_Q4_M01219 TRANSFAC - 26401756 26401766 5.0E-06 CCGCCTCCTCC 11 V_PIT1_01_M01465 TRANSFAC - 26401853 26401869 3.0E-06 TATTAATTCATTAGGAG 17 V_PIT1_01_M01465 TRANSFAC + 26401854 26401870 6.0E-06 TCCTAATGAATTAATAA 17 V_PIT1_01_M01465 TRANSFAC - 26401857 26401873 7.0E-06 CCATTATTAATTCATTA 17 V_PIT1_01_M01465 TRANSFAC + 26401858 26401874 1.0E-06 AATGAATTAATAATGGC 17 V_RREB1_01_M00257 TRANSFAC - 26396966 26396979 9.0E-06 ACACACAAAACCCC 14 V_RREB1_01_M00257 TRANSFAC - 26402801 26402814 3.0E-06 CCACACACAACCCC 14 V_NCX_02_M01420 TRANSFAC + 26401857 26401873 0.0E+00 TAATGAATTAATAATGG 17 V_PPARA_02_M00518 TRANSFAC - 26407540 26407558 4.0E-06 GCAGGTCGTAGGGGTTGCG 19 V_CTCF_02_M01259 TRANSFAC + 26394530 26394549 0.0E+00 CAATTACCTGCAGAGGGCGC 20 V_LHX3b_01_M01971 TRANSFAC + 26401862 26401871 1.0E-05 AATTAATAAT 10 V_CTCF_01_M01200 TRANSFAC + 26394532 26394551 0.0E+00 ATTACCTGCAGAGGGCGCCG 20 V_SP4_Q5_M01273 TRANSFAC - 26395896 26395906 1.0E-06 GCCCCGCCCCC 11 V_SP4_Q5_M01273 TRANSFAC - 26395909 26395919 1.0E-06 GCCCCGCCCCC 11 V_OTX2_Q3_M01719 TRANSFAC + 26402220 26402232 3.0E-06 AGAGAGATTAAAT 13 V_HBP1_04_M02866 TRANSFAC + 26402186 26402202 4.0E-06 TGTTTCCATTTTACAGA 17 V_MYOD_Q6_02_M02100 TRANSFAC + 26397530 26397538 8.0E-06 CAGCTGTCT 9 V_MAZR_01_M00491 TRANSFAC + 26402083 26402095 7.0E-06 GCGGGAGGGGCCA 13 V_AP4_01_M00005 TRANSFAC - 26402618 26402635 4.0E-06 AAGCCCAGCGCCGGTCAT 18 V_AP4_01_M00005 TRANSFAC + 26402700 26402717 7.0E-06 TCCCCCAGCTCCAGCCCT 18 V_OBOX2_02_M03064 TRANSFAC + 26402218 26402234 4.0E-06 CCAGAGAGATTAAATAA 17 V_BRN4_01_M01473 TRANSFAC - 26401853 26401869 5.0E-06 TATTAATTCATTAGGAG 17 V_BRN4_01_M01473 TRANSFAC + 26401854 26401870 3.0E-06 TCCTAATGAATTAATAA 17 V_BRN4_01_M01473 TRANSFAC - 26401857 26401873 7.0E-06 CCATTATTAATTCATTA 17 V_BRN4_01_M01473 TRANSFAC + 26401858 26401874 1.0E-06 AATGAATTAATAATGGC 17 V_NCX_01_M00484 TRANSFAC - 26394529 26394538 1.0E-05 AGGTAATTGG 10 V_HDX_01_M01333 TRANSFAC - 26401842 26401858 3.0E-06 TAGGAGAAATCAGCGTG 17 V_PITX1_01_M01484 TRANSFAC + 26402218 26402234 4.0E-06 CCAGAGAGATTAAATAA 17 V_MEIS1_01_M00419 TRANSFAC - 26397693 26397704 3.0E-06 CAGTGACAGATG 12 V_FPM315_01_M01587 TRANSFAC + 26401750 26401761 2.0E-06 AGGGGAGGAGGA 12 V_REST_02_M02256 TRANSFAC + 26397781 26397801 0.0E+00 GCTAGGACCCAGGACAGCTCT 21 V_ZFP281_01_M01597 TRANSFAC + 26396904 26396914 2.0E-06 GGGGGGAGGGG 11 V_ZFP281_01_M01597 TRANSFAC + 26396928 26396938 5.0E-06 TGGGGGATGGG 11 V_ZFP281_01_M01597 TRANSFAC + 26401744 26401754 7.0E-06 CGGGGGAGGGG 11 V_ZFP281_04_M02831 TRANSFAC - 26402647 26402661 9.0E-06 GCACCATCCCCCTCC 15 V_EWSR1FLI1_01_M02252 TRANSFAC - 26402590 26402607 8.0E-06 GGAAGGAAGGGAGCCCTC 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 26402594 26402611 0.0E+00 GGGAGGAAGGAAGGGAGC 18 V_HOXD8_01_M01432 TRANSFAC + 26401857 26401873 8.0E-06 TAATGAATTAATAATGG 17 V_SOX1_03_M02802 TRANSFAC - 26401854 26401869 1.0E-06 TATTAATTCATTAGGA 16 V_GLI_Q2_M01037 TRANSFAC - 26407205 26407216 6.0E-06 CCTTGGTGGTCT 12 V_SP1_Q2_01_M00933 TRANSFAC - 26395896 26395905 4.0E-06 CCCCGCCCCC 10 V_SP1_Q2_01_M00933 TRANSFAC - 26395909 26395918 4.0E-06 CCCCGCCCCC 10 V_SP1_Q2_01_M00933 TRANSFAC + 26402067 26402076 7.0E-06 CCCCGCCCCT 10 V_SP1_Q2_01_M00933 TRANSFAC - 26402788 26402797 7.0E-06 CCCCGCCCCT 10 V_UF1H3BETA_Q6_M01068 TRANSFAC + 26396926 26396939 2.0E-06 GTTGGGGGATGGGC 14 V_UF1H3BETA_Q6_M01068 TRANSFAC + 26402780 26402793 4.0E-06 GTTGGGGCAGGGGC 14 V_UF1H3BETA_Q6_M01068 TRANSFAC + 26402791 26402804 4.0E-06 GGCGGGGGTGGGGG 14 V_BRN3C_01_M01408 TRANSFAC - 26401857 26401872 3.0E-06 CATTATTAATTCATTA 16 V_SP1_Q4_01_M00932 TRANSFAC + 26395895 26395907 0.0E+00 AGGGGGCGGGGCC 13 V_SP1_Q4_01_M00932 TRANSFAC + 26395908 26395920 1.0E-06 CGGGGGCGGGGCC 13 V_OBOX5_01_M01381 TRANSFAC + 26402219 26402235 0.0E+00 CAGAGAGATTAAATAAT 17 V_OBOX3_02_M03065 TRANSFAC + 26402218 26402234 4.0E-06 CCAGAGAGATTAAATAA 17 V_RNF96_01_M01199 TRANSFAC + 26395957 26395966 7.0E-06 GCCCGCGGCC 10 V_RNF96_01_M01199 TRANSFAC + 26397037 26397046 7.0E-06 GCCCGCGGCC 10 V_OBOX6_06_M03067 TRANSFAC - 26402219 26402235 0.0E+00 ATTATTTAATCTCTCTG 17 V_OBOX3_01_M01466 TRANSFAC + 26402218 26402234 4.0E-06 CCAGAGAGATTAAATAA 17

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.