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OTOS Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 150677 otospiralin chr2 - 241079573 - 241085073 241080073 Transcription Factor Binding Sites   Download all TFBS in the OTOS promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU4F2_POU_full_monomeric_16_1 SELEX + 241076384 241076399 5.0E-06 ATTTATAATAAATGAA 16 CTCF_MA0139.1 JASPAR - 241083374 241083392 0.0E+00 TGGACAGCAGGGGGCACCA 19 GABPA_MA0062.2 JASPAR - 241075724 241075734 4.0E-06 CCGGAAGTGAG 11 GABPA_MA0062.2 JASPAR - 241075742 241075752 6.0E-06 CCGGAAGCGGC 11 POU3F3_POU_DBD_monomeric_12_1 SELEX - 241079438 241079449 9.0E-06 TTGCATAAGTAA 12 NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX - 241076047 241076057 8.0E-06 TCTGAAGGTCA 11 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 241076381 241076392 5.0E-06 ATTATAAATAAC 12 POU3F2_POU_DBD_monomeric_13_1 SELEX - 241079438 241079450 7.0E-06 TTTGCATAAGTAA 13 POU3F4_POU_DBD_monomeric_11_1 SELEX - 241079438 241079448 9.0E-06 TGCATAAGTAA 11 HINFP1_C2H2_full_dimeric_20_1 SELEX - 241075822 241075841 1.0E-06 GCGGACGCGCCGGCGGCCGG 20 POU1F1_POU_DBD_monomeric_14_1 SELEX + 241079441 241079454 0.0E+00 CTTATGCAAATGAA 14 Esrrb_MA0141.1 JASPAR - 241076047 241076058 1.0E-05 GTCTGAAGGTCA 12 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 241076381 241076392 6.0E-06 ATTATAAATAAC 12 RARA_nuclearreceptor_DBD_dimeric_18_2 SELEX - 241076044 241076061 8.0E-06 AACGTCTGAAGGTCAAGC 18 POU2F2_POU_DBD_monomeric_11_1 SELEX + 241079442 241079452 1.0E-06 TTATGCAAATG 11 BARHL2_homeodomain_full_dimeric_16_1 SELEX + 241076382 241076397 7.0E-06 TTATTTATAATAAATG 16 POU4F3_POU_DBD_monomeric_16_1 SELEX + 241076384 241076399 2.0E-06 ATTTATAATAAATGAA 16 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX + 241076382 241076397 9.0E-06 TTATTTATAATAAATG 16 POU3F3_POU_DBD_monomeric_13_1 SELEX + 241079441 241079453 2.0E-06 CTTATGCAAATGA 13 MEF2A_MA0052.1 JASPAR + 241076382 241076391 4.0E-06 TTATTTATAA 10 POU2F3_POU_DBD_dimeric_12_1 SELEX - 241079438 241079449 8.0E-06 TTGCATAAGTAA 12 ESRRG_nuclearreceptor_full_monomeric_10_1 SELEX - 241076046 241076055 3.0E-06 TGAAGGTCAA 10 POU1F1_POU_DBD_monomeric_17_1 SELEX - 241079436 241079452 3.0E-06 CATTTGCATAAGTAACT 17 POU3F1_POU_DBD_monomeric_12_1 SELEX + 241079442 241079453 0.0E+00 TTATGCAAATGA 12 Pou5f1_MA0142.1 JASPAR + 241079437 241079451 3.0E-06 GTTACTTATGCAAAT 15 POU2F1_POU_DBD_monomeric_12_1 SELEX + 241079441 241079452 1.0E-06 CTTATGCAAATG 12 ESRRB_nuclearreceptor_DBD_monomeric_11_1 SELEX - 241076045 241076055 8.0E-06 TGAAGGTCAAG 11 GABPA_ETS_full_monomeric_10_1 SELEX - 241075726 241075735 9.0E-06 GCCGGAAGTG 10 ETV6_ETS_full_dimeric_15_1 SELEX - 241077977 241077991 2.0E-06 CAGGAAACGGAACTG 15 POU3F3_POU_DBD_dimeric_12_1 SELEX - 241079438 241079449 1.0E-05 TTGCATAAGTAA 12 POU3F2_POU_DBD_monomeric_12_1 SELEX + 241079442 241079453 0.0E+00 TTATGCAAATGA 12 POU4F1_POU_DBD_monomeric_14_1 SELEX + 241076384 241076397 7.0E-06 ATTTATAATAAATG 14 V_CEBPG_Q6_M00622 TRANSFAC + 241079983 241079995 7.0E-06 ATGACTTAAGAAA 13 V_DBX1_01_M01483 TRANSFAC + 241076382 241076398 4.0E-06 TTATTTATAATAAATGA 17 V_DBX1_01_M01483 TRANSFAC - 241076382 241076398 1.0E-06 TCATTTATTATAAATAA 17 V_DBX1_01_M01483 TRANSFAC + 241076385 241076401 5.0E-06 TTTATAATAAATGAAAA 17 V_DBX1_01_M01483 TRANSFAC - 241076385 241076401 7.0E-06 TTTTCATTTATTATAAA 17 V_DBX1_01_M01483 TRANSFAC - 241076386 241076402 5.0E-06 TTTTTCATTTATTATAA 17 V_FLI1_Q6_M01208 TRANSFAC - 241075724 241075734 3.0E-06 CCGGAAGTGAG 11 V_POU3F3_01_M03090 TRANSFAC - 241079438 241079454 1.0E-06 TTCATTTGCATAAGTAA 17 V_POU3F3_01_M03090 TRANSFAC + 241079439 241079455 3.0E-06 TACTTATGCAAATGAAA 17 V_SRY_07_M02813 TRANSFAC + 241076381 241076396 3.0E-06 GTTATTTATAATAAAT 16 V_SRY_07_M02813 TRANSFAC - 241076381 241076396 9.0E-06 ATTTATTATAAATAAC 16 V_HMGIY_Q3_M01010 TRANSFAC - 241079988 241080002 7.0E-06 GGTGCAATTTCTTAA 15 V_POU5F1_02_M02245 TRANSFAC + 241079437 241079451 3.0E-06 GTTACTTATGCAAAT 15 V_MEF2_02_M00231 TRANSFAC - 241076377 241076398 4.0E-06 TCATTTATTATAAATAACGCTG 22 V_ZTA_Q2_M00711 TRANSFAC - 241078019 241078031 3.0E-06 ACACCATGACACA 13 V_OCTAMER_01_M01324 TRANSFAC - 241079438 241079454 1.0E-06 TTCATTTGCATAAGTAA 17 V_OCTAMER_01_M01324 TRANSFAC + 241079439 241079455 3.0E-06 TACTTATGCAAATGAAA 17 V_OCT1_01_M00135 TRANSFAC + 241079438 241079456 0.0E+00 TTACTTATGCAAATGAAAG 19 V_POU2F3_01_M01476 TRANSFAC + 241079440 241079455 0.0E+00 ACTTATGCAAATGAAA 16 V_OCT_C_M00210 TRANSFAC - 241079442 241079454 0.0E+00 TTCATTTGCATAA 13 V_SOX21_03_M02803 TRANSFAC + 241076381 241076396 1.0E-06 GTTATTTATAATAAAT 16 V_SOX21_03_M02803 TRANSFAC - 241076381 241076396 1.0E-06 ATTTATTATAAATAAC 16 V_SOX21_03_M02803 TRANSFAC + 241076384 241076399 3.0E-06 ATTTATAATAAATGAA 16 V_SOX21_03_M02803 TRANSFAC - 241076384 241076399 2.0E-06 TTCATTTATTATAAAT 16 V_BRN2_01_M00145 TRANSFAC + 241076381 241076396 3.0E-06 GTTATTTATAATAAAT 16 V_MEF2A_Q6_M02024 TRANSFAC + 241076383 241076392 7.0E-06 TATTTATAAT 10 V_CDP_04_M01344 TRANSFAC + 241076383 241076397 5.0E-06 TATTTATAATAAATG 15 V_ZNF219_01_M01122 TRANSFAC + 241079999 241080010 1.0E-05 CACCCCCCTCCA 12 V_CEBPE_Q6_M01868 TRANSFAC - 241079987 241080000 6.0E-06 TGCAATTTCTTAAG 14 V_IRX4_01_M01410 TRANSFAC - 241083500 241083516 9.0E-06 TTAAATCATGTACAAGT 17 V_ER81_02_M02065 TRANSFAC - 241075726 241075735 1.0E-05 GCCGGAAGTG 10 V_MEF2_03_M00232 TRANSFAC - 241076377 241076398 8.0E-06 TCATTTATTATAAATAACGCTG 22 V_SREBP_Q6_M01168 TRANSFAC - 241083434 241083448 7.0E-06 CCGGCCACCCCAGGC 15 V_MATH1_Q2_M01716 TRANSFAC - 241075463 241075472 9.0E-06 GCACCTGGTG 10 V_CUX1_04_M02959 TRANSFAC + 241076383 241076397 5.0E-06 TATTTATAATAAATG 15 V_GADP_01_M01258 TRANSFAC + 241075726 241075737 2.0E-06 CACTTCCGGCCT 12 V_GADP_01_M01258 TRANSFAC + 241075744 241075755 5.0E-06 CGCTTCCGGCGC 12 V_OCT1_04_M00138 TRANSFAC + 241076376 241076398 7.0E-06 GCAGCGTTATTTATAATAAATGA 23 V_OCT1_04_M00138 TRANSFAC + 241079436 241079458 0.0E+00 AGTTACTTATGCAAATGAAAGGA 23 V_TEL2_Q6_M00678 TRANSFAC + 241075725 241075734 9.0E-06 TCACTTCCGG 10 V_NCX_02_M01420 TRANSFAC - 241076382 241076398 4.0E-06 TCATTTATTATAAATAA 17 V_HB24_01_M01399 TRANSFAC + 241076386 241076400 9.0E-06 TTATAATAAATGAAA 15 V_TBP_06_M02814 TRANSFAC + 241076379 241076394 6.0E-06 GCGTTATTTATAATAA 16 V_TBP_06_M02814 TRANSFAC - 241076379 241076394 2.0E-06 TTATTATAAATAACGC 16 V_TBP_06_M02814 TRANSFAC + 241076381 241076396 3.0E-06 GTTATTTATAATAAAT 16 V_TBP_06_M02814 TRANSFAC - 241076381 241076396 5.0E-06 ATTTATTATAAATAAC 16 V_TBP_06_M02814 TRANSFAC - 241076383 241076398 7.0E-06 TCATTTATTATAAATA 16 V_CTCF_02_M01259 TRANSFAC - 241083376 241083395 1.0E-06 AGCTGGACAGCAGGGGGCAC 20 V_CTCF_01_M01200 TRANSFAC - 241083374 241083393 0.0E+00 CTGGACAGCAGGGGGCACCA 20 V_IRX5_01_M01472 TRANSFAC - 241083500 241083516 5.0E-06 TTAAATCATGTACAAGT 17 V_ELK1_01_M00007 TRANSFAC - 241075723 241075738 8.0E-06 GAGGCCGGAAGTGAGC 16 V_AML2_Q3_01_M01854 TRANSFAC - 241078023 241078033 4.0E-06 CCACACCATGA 11 V_TBP_01_M00471 TRANSFAC - 241076383 241076390 4.0E-06 TATAAATA 8 V_OCT2_01_M01368 TRANSFAC + 241079440 241079455 0.0E+00 ACTTATGCAAATGAAA 16 V_FOXL1_02_M02857 TRANSFAC + 241076383 241076398 8.0E-06 TATTTATAATAAATGA 16 V_FOXL1_04_M02753 TRANSFAC - 241076378 241076394 1.0E-06 TTATTATAAATAACGCT 17 V_ERR2_01_M01589 TRANSFAC - 241076044 241076055 9.0E-06 TGAAGGTCAAGC 12 V_TCF7_04_M02921 TRANSFAC - 241076382 241076396 0.0E+00 ATTTATTATAAATAA 15 V_TCF7_04_M02921 TRANSFAC + 241076384 241076398 7.0E-06 ATTTATAATAAATGA 15 V_RSRFC4_01_M00026 TRANSFAC + 241076379 241076394 7.0E-06 GCGTTATTTATAATAA 16 V_PLZF_02_M01075 TRANSFAC - 241083499 241083527 5.0E-06 TCTTTAGGGCTTTAAATCATGTACAAGTG 29 V_IRX2_01_M01405 TRANSFAC - 241083500 241083516 8.0E-06 TTAAATCATGTACAAGT 17 V_ERR1_Q2_01_M02093 TRANSFAC - 241076044 241076054 7.0E-06 GAAGGTCAAGC 11 V_SATB1_01_M01232 TRANSFAC - 241076382 241076393 1.0E-06 TATTATAAATAA 12 V_SATB1_01_M01232 TRANSFAC + 241076383 241076394 4.0E-06 TATTTATAATAA 12 V_HOXD8_01_M01432 TRANSFAC + 241076385 241076401 8.0E-06 TTTATAATAAATGAAAA 17 V_HMEF2_Q6_M00406 TRANSFAC - 241076378 241076393 1.0E-06 TATTATAAATAACGCT 16 V_CEBP_Q2_01_M00912 TRANSFAC - 241079439 241079450 8.0E-06 TTTGCATAAGTA 12 V_IRXB3_01_M01377 TRANSFAC - 241083500 241083516 5.0E-06 TTAAATCATGTACAAGT 17 V_RNF96_01_M01199 TRANSFAC - 241083333 241083342 7.0E-06 GCCCGCAGCC 10 V_GLIS2_04_M02863 TRANSFAC - 241076382 241076395 5.0E-06 TTTATTATAAATAA 14 V_FOXK1_03_M02752 TRANSFAC - 241076378 241076394 1.0E-05 TTATTATAAATAACGCT 17 V_SOX14_03_M02798 TRANSFAC + 241076381 241076396 1.0E-06 GTTATTTATAATAAAT 16 V_SOX14_03_M02798 TRANSFAC - 241076381 241076396 3.0E-06 ATTTATTATAAATAAC 16 V_SOX14_03_M02798 TRANSFAC - 241076384 241076399 8.0E-06 TTCATTTATTATAAAT 16 V_CEBPA_Q6_M01866 TRANSFAC + 241079439 241079451 3.0E-06 TACTTATGCAAAT 13 V_OCT4_01_M01125 TRANSFAC + 241079437 241079451 5.0E-06 GTTACTTATGCAAAT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.