Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

BPIFB4 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 149954 BPI fold containing family B, member 4 chr20 + 31664317 - 31669817 31669317 Transcription Factor Binding Sites   Download all TFBS in the BPIFB4 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints TFAP2B_TFAP_DBD_dimeric_11_1 SELEX + 31667405 31667415 1.0E-06 AGCCTCAGGCT 11 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX - 31667405 31667415 3.0E-06 AGCCTGAGGCT 11 RUNX3_RUNX_DBD_dimeric_16_1 SELEX + 31667290 31667305 0.0E+00 TAGCCACAAACCGCAA 16 RUNX3_RUNX_DBD_dimeric_16_1 SELEX + 31667297 31667312 8.0E-06 AAACCGCAAACCTTTA 16 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX + 31667405 31667415 1.0E-06 AGCCTCAGGCT 11 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX - 31667405 31667415 6.0E-06 AGCCTGAGGCT 11 RUNX3_RUNX_full_monomeric_10_1 SELEX + 31667297 31667306 1.0E-06 AAACCGCAAA 10 RUNX2_RUNX_DBD_monomeric_9_1 SELEX + 31667297 31667305 3.0E-06 AAACCGCAA 9 RUNX2_RUNX_DBD_dimeric_16_1 SELEX + 31667290 31667305 0.0E+00 TAGCCACAAACCGCAA 16 RUNX2_RUNX_DBD_dimeric_16_1 SELEX + 31667297 31667312 4.0E-06 AAACCGCAAACCTTTA 16 TFAP2C_TFAP_full_dimeric_11_1 SELEX + 31667405 31667415 1.0E-06 AGCCTCAGGCT 11 TFAP2C_TFAP_full_dimeric_11_1 SELEX - 31667405 31667415 2.0E-06 AGCCTGAGGCT 11 PPARG_MA0066.1 JASPAR + 31664735 31664754 6.0E-06 TTGGGTGACTGGCACCACCT 20 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX - 31664811 31664821 3.0E-06 TTTCCCCACTC 11 NFE2L2_MA0150.1 JASPAR - 31664521 31664531 9.0E-06 GTGACTCAGCC 11 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX + 31667405 31667415 1.0E-06 AGCCTCAGGCT 11 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX - 31667405 31667415 2.0E-06 AGCCTGAGGCT 11 V_ZSCAN4_03_M02838 TRANSFAC - 31664755 31664771 8.0E-06 GGGAGGTGCACACATGA 17 V_AML_Q6_M00769 TRANSFAC - 31667295 31667309 5.0E-06 AGGTTTGCGGTTTGT 15 V_BACH2_01_M00490 TRANSFAC + 31664538 31664548 5.0E-06 GGTGAGTCACC 11 V_MTF1_Q4_M00650 TRANSFAC - 31667267 31667280 4.0E-06 CTTGCACTCAGCCC 14 V_CEBP_C_M00201 TRANSFAC + 31664810 31664827 5.0E-06 GGAGTGGGGAAAGGCACA 18 V_PRX2_Q2_M02115 TRANSFAC + 31670532 31670540 7.0E-06 TTAAAGTAA 9 V_LDSPOLYA_B_M00317 TRANSFAC + 31664470 31664485 3.0E-06 GATCTGTTTTCTAATC 16 V_TCFAP2C_04_M02925 TRANSFAC + 31667224 31667237 1.0E-06 CAGCCCAAGGGCTG 14 V_AP1_Q6_M00174 TRANSFAC - 31664522 31664532 1.0E-05 GGTGACTCAGC 11 V_HMBOX1_01_M01456 TRANSFAC + 31670523 31670539 1.0E-06 CAAATCTAGTTAAAGTA 17 V_CRX_Q4_M00623 TRANSFAC + 31664477 31664489 1.0E-06 TTTCTAATCTCAG 13 V_HOXB6_01_M01460 TRANSFAC - 31667364 31667379 2.0E-06 ACTGTGTAATTACAAG 16 V_PEBP_Q6_M00984 TRANSFAC + 31667295 31667309 7.0E-06 ACAAACCGCAAACCT 15 V_TFIII_Q6_M00706 TRANSFAC - 31664766 31664774 6.0E-06 AGAGGGAGG 9 V_GATA1_05_M00346 TRANSFAC + 31667234 31667243 6.0E-06 GCTGATAAAA 10 V_LBP9_01_M01592 TRANSFAC - 31667152 31667168 5.0E-06 CCAGATGCATCTAGTTT 17 V_POU5F1_01_M01307 TRANSFAC - 31664835 31664844 6.0E-06 AATGCAAAGA 10 V_SMAD3_03_M02794 TRANSFAC + 31670538 31670554 6.0E-06 TAAGACCAGACAAAACC 17 V_HNF1B_01_M01425 TRANSFAC - 31670524 31670540 4.0E-06 TTACTTTAACTAGATTT 17 V_MOX1_01_M01443 TRANSFAC - 31667362 31667377 5.0E-06 TGTGTAATTACAAGAG 16 V_NFE2L2_01_M02263 TRANSFAC - 31664521 31664531 9.0E-06 GTGACTCAGCC 11 V_TFE_Q6_M01029 TRANSFAC + 31667250 31667257 1.0E-05 TCATGTGA 8

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.