Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

C1orf210 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 149466 chromosome 1 open reading frame 210 chr1 - 43750750 - 43756288 43751250 Transcription Factor Binding Sites   Download all TFBS in the C1orf210 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SP8_C2H2_DBD_monomeric_12_1 SELEX - 43751327 43751338 5.0E-06 GCCCCGCCCACT 12 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX + 43746650 43746659 3.0E-06 GCAATTAAAA 10 MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 43746650 43746667 0.0E+00 GCAATTAAAAACAGCTTA 18 Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX + 43746650 43746659 1.0E-06 GCAATTAAAA 10 BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 43746651 43746667 0.0E+00 CAATTAAAAACAGCTTA 17 SRY_HMG_DBD_dimeric_15_1 SELEX + 43748125 43748139 7.0E-06 GAGAATAACATTGAT 15 SOX2_HMG_full_dimeric_17_1 SELEX + 43748124 43748140 6.0E-06 GGAGAATAACATTGATT 17 SRY_HMG_DBD_dimeric_13_2 SELEX + 43748126 43748138 3.0E-06 AGAATAACATTGA 13 Lhx8_homeodomain_DBD_dimeric_12_1 SELEX + 43746645 43746656 4.0E-06 TGCTTGCAATTA 12 Lhx8_homeodomain_DBD_dimeric_12_1 SELEX - 43746645 43746656 3.0E-06 TAATTGCAAGCA 12 SOX15_HMG_full_dimeric_15_3 SELEX + 43748125 43748139 5.0E-06 GAGAATAACATTGAT 15 FOXD2_forkhead_DBD_dimeric_14_1 SELEX + 43748127 43748140 2.0E-06 GAATAACATTGATT 14 HMX3_homeodomain_DBD_monomeric_11_1 SELEX + 43746649 43746659 4.0E-06 TGCAATTAAAA 11 FOXD3_forkhead_DBD_dimeric_14_1 SELEX + 43748127 43748140 2.0E-06 GAATAACATTGATT 14 SOX2_HMG_full_dimeric_15_1 SELEX + 43748125 43748139 4.0E-06 GAGAATAACATTGAT 15 HOXC11_homeodomain_full_monomeric_11_2 SELEX + 43746649 43746659 8.0E-06 TGCAATTAAAA 11 SP4_C2H2_full_monomeric_17_1 SELEX - 43751325 43751341 3.0E-06 TCAGCCCCGCCCACTGC 17 SOX15_HMG_full_dimeric_15_1 SELEX + 43748125 43748139 2.0E-06 GAGAATAACATTGAT 15 SOX14_HMG_DBD_dimeric_15_1 SELEX + 43748125 43748139 1.0E-05 GAGAATAACATTGAT 15 SP1_C2H2_DBD_monomeric_11_1 SELEX - 43751328 43751338 1.0E-05 GCCCCGCCCAC 11 PRDM4_C2H2_full_monomeric_13_1 SELEX + 43748377 43748389 1.0E-06 GTTCAAGGCCCCC 13 SOX14_HMG_DBD_dimeric_12_1 SELEX + 43748126 43748137 1.0E-06 AGAATAACATTG 12 Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 43746650 43746667 1.0E-06 GCAATTAAAAACAGCTTA 18 Pou5f1_MA0142.1 JASPAR - 43746677 43746691 9.0E-06 TTTTAAGATGGAAAA 15 LHX6_homeodomain_full_dimeric_12_1 SELEX + 43746645 43746656 1.0E-06 TGCTTGCAATTA 12 HMX2_homeodomain_DBD_monomeric_11_1 SELEX + 43746649 43746659 7.0E-06 TGCAATTAAAA 11 SRY_HMG_DBD_dimeric_13_1 SELEX + 43748126 43748138 4.0E-06 AGAATAACATTGA 13 Sox3_HMG_DBD_dimeric_17_1 SELEX + 43748124 43748140 1.0E-05 GGAGAATAACATTGATT 17 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 43746650 43746667 1.0E-06 GCAATTAAAAACAGCTTA 18 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX + 43746649 43746659 1.0E-05 TGCAATTAAAA 11 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX + 43746649 43746659 5.0E-06 TGCAATTAAAA 11 HMX1_homeodomain_DBD_monomeric_11_1 SELEX + 43746649 43746659 5.0E-06 TGCAATTAAAA 11 V_MEIS1BHOXA9_02_M00421 TRANSFAC - 43748405 43748418 1.0E-06 TGACAGCTTAAGGA 14 V_TCF3_01_M01594 TRANSFAC + 43746636 43746648 5.0E-06 CCTTTCTATTGCT 13 V_TCF4_Q5_01_M02033 TRANSFAC - 43746594 43746603 5.0E-06 ATCAAAGGGA 10 V_POU5F1_02_M02245 TRANSFAC - 43746677 43746691 9.0E-06 TTTTAAGATGGAAAA 15 V_IRF3_05_M02767 TRANSFAC + 43748164 43748177 5.0E-06 AAGAAAAGAAACCA 14 V_TR4_Q2_M01725 TRANSFAC + 43746556 43746566 1.0E-06 CCTGACCTCTG 11 V_NERF_Q2_M00531 TRANSFAC - 43746576 43746593 2.0E-06 CAGCAGGAAGCAGGCGGT 18 V_BACH1_01_M00495 TRANSFAC - 43751305 43751319 8.0E-06 CAGGTGAGTCAAGCT 15 V_GC_01_M00255 TRANSFAC + 43751327 43751340 0.0E+00 AGTGGGCGGGGCTG 14 V_ZFP105_03_M02827 TRANSFAC + 43746649 43746663 6.0E-06 TGCAATTAAAAACAG 15 V_GFI1_01_M00250 TRANSFAC - 43748125 43748148 9.0E-06 ACTGTCGAAATCAATGTTATTCTC 24 V_PAX9_B_M00329 TRANSFAC + 43748177 43748200 4.0E-06 AAGAGGCCGAGAGGCATGATCACA 24 V_NKX61_01_M00424 TRANSFAC - 43746648 43746660 1.0E-06 TTTTTAATTGCAA 13 V_SP1_Q6_M00196 TRANSFAC + 43751327 43751339 2.0E-06 AGTGGGCGGGGCT 13 V_IRF_Q6_M00772 TRANSFAC - 43748165 43748179 2.0E-06 CTTGGTTTCTTTTCT 15 V_ISRE_01_M00258 TRANSFAC - 43748163 43748177 4.0E-06 TGGTTTCTTTTCTTG 15 V_ISGF3G_03_M02771 TRANSFAC + 43748164 43748178 2.0E-06 AAGAAAAGAAACCAA 15 V_ICSBP_Q6_M00699 TRANSFAC + 43748166 43748177 4.0E-06 GAAAAGAAACCA 12 V_NEUROD_02_M01288 TRANSFAC + 43746585 43746596 1.0E-06 TTCCTGCTGTCC 12 V_SP4_Q5_M01273 TRANSFAC - 43751328 43751338 9.0E-06 GCCCCGCCCAC 11 V_ZFP105_04_M02931 TRANSFAC - 43748265 43748281 3.0E-06 CTTGCTCAATAACTCTC 17 V_LRH1_Q5_M01142 TRANSFAC - 43748377 43748388 8.0E-06 GGGGCCTTGAAC 12 V_HOXB8_01_M01451 TRANSFAC + 43746646 43746661 7.0E-06 GCTTGCAATTAAAAAC 16 V_FOXJ3_06_M02855 TRANSFAC - 43748224 43748240 3.0E-06 TAAAGCCAAACAAAGGC 17 V_T3R_Q6_M00963 TRANSFAC + 43748401 43748409 3.0E-06 ACTGTCCTT 9 V_SOX4_01_M01308 TRANSFAC - 43748225 43748232 1.0E-05 AACAAAGG 8 V_SOX2_Q6_M01272 TRANSFAC + 43748221 43748236 7.0E-06 CAAGCCTTTGTTTGGC 16 V_SP1_Q4_01_M00932 TRANSFAC + 43751327 43751339 1.0E-06 AGTGGGCGGGGCT 13 V_SOX9_Q4_M01284 TRANSFAC - 43746594 43746604 4.0E-06 AATCAAAGGGA 11 V_SOX9_Q4_M01284 TRANSFAC - 43748223 43748233 3.0E-06 AAACAAAGGCT 11 V_PPARA_01_M00242 TRANSFAC + 43748247 43748266 3.0E-06 GAACAGCAGGGAACAGTTGA 20 V_OCT4_01_M01125 TRANSFAC - 43746677 43746691 9.0E-06 TTTTAAGATGGAAAA 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.