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CLDN19 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 149461 claudin 19 chr1 - 43205425 - 43210925 43205925 Transcription Factor Binding Sites   Download all TFBS in the CLDN19 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NKX2-8_homeodomain_full_monomeric_9_1 SELEX - 43206858 43206866 3.0E-06 CCACTTGAA 9 NFIA_NFI_full_dimeric_15_1 SELEX - 43209199 43209213 9.0E-06 ATGGAAATATGCCAA 15 NR2E1_nuclearreceptor_full_monomeric_9_1 SELEX - 43206269 43206277 3.0E-06 TAAAGTCAA 9 NR2F6_nuclearreceptor_full_dimeric_14_1 SELEX - 43206263 43206276 3.0E-06 AAAGTCAAAGGGCA 14 NFIX_NFI_full_dimeric_15_2 SELEX + 43209199 43209213 1.0E-06 TTGGCATATTTCCAT 15 NFIX_NFI_full_dimeric_15_2 SELEX - 43209199 43209213 1.0E-06 ATGGAAATATGCCAA 15 GCM1_GCM_full_dimeric_16_1 SELEX + 43201276 43201291 8.0E-06 ATGCTGGTGCCCACCA 16 Pax4_MA0068.1 JASPAR - 43203343 43203372 4.0E-06 CAAAAAAATCAAACGATCAATCAATCCCAG 30 ZNF238_C2H2_full_monomeric_13_1 SELEX - 43209682 43209694 2.0E-06 AGGCCAGATGTTT 13 NR2F1_MA0017.1 JASPAR + 43206220 43206233 8.0E-06 TGGACTTTGCTCTT 14 RHOXF1_homeodomain_full_dimeric_9_1 SELEX + 43206184 43206192 3.0E-06 GGATAATCC 9 RHOXF1_homeodomain_full_dimeric_9_1 SELEX - 43206184 43206192 6.0E-06 GGATTATCC 9 Klf4_MA0039.2 JASPAR - 43203203 43203212 3.0E-06 AGGGTGTGGC 10 TFAP2B_TFAP_DBD_dimeric_12_1 SELEX - 43201335 43201346 9.0E-06 AGCCCCCAGGCA 12 TFAP2B_TFAP_DBD_dimeric_12_1 SELEX - 43209088 43209099 8.0E-06 CGCCCTGAGGCA 12 CUX1_CUT_DBD_dimeric_18_1 SELEX - 43203348 43203365 1.0E-06 ATCAAACGATCAATCAAT 18 CUX1_CUT_DBD_dimeric_18_1 SELEX - 43203352 43203369 1.0E-05 AAAAATCAAACGATCAAT 18 FOXO4_forkhead_DBD_putatively-multimeric_12_1 SELEX + 43206132 43206143 1.0E-06 TTTCCCCACAGG 12 NR2F1_nuclearreceptor_DBD_dimeric_15_1 SELEX - 43206262 43206276 6.0E-06 AAAGTCAAAGGGCAG 15 HNF4A_nuclearreceptor_full_dimeric_16_1 SELEX - 43206218 43206233 2.0E-06 AAGAGCAAAGTCCATC 16 NR2C2_nuclearreceptor_DBD_dimeric_14_1 SELEX - 43206263 43206276 7.0E-06 AAAGTCAAAGGGCA 14 PBX1_MA0070.1 JASPAR - 43203348 43203359 1.0E-06 CGATCAATCAAT 12 NKX2-3_homeodomain_full_monomeric_10_1 SELEX - 43206858 43206867 8.0E-06 CCCACTTGAA 10 POU3F1_POU_DBD_monomeric_12_1 SELEX - 43209730 43209741 1.0E-05 TTATGCTAAACA 12 CUX2_CUT_DBD_dimeric_18_1 SELEX - 43203348 43203365 9.0E-06 ATCAAACGATCAATCAAT 18 NFIB_NFI_full_dimeric_15_1 SELEX + 43209199 43209213 6.0E-06 TTGGCATATTTCCAT 15 NFIB_NFI_full_dimeric_15_1 SELEX - 43209199 43209213 9.0E-06 ATGGAAATATGCCAA 15 HNF4A_MA0114.1 JASPAR - 43206220 43206232 1.0E-06 AGAGCAAAGTCCA 13 NR3C1_MA0113.1 JASPAR - 43203026 43203043 7.0E-06 AGGAAGATTTTGTTCCTC 18 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX + 43206132 43206142 2.0E-06 TTTCCCCACAG 11 ZNF410_C2H2_DBD_monomeric_17_1 SELEX + 43209182 43209198 3.0E-06 GCAATCCCATCATACTC 17 FOXO6_forkhead_DBD_putatively-multimeric_14_1 SELEX + 43206132 43206145 6.0E-06 TTTCCCCACAGGGA 14 TFAP2A_TFAP_DBD_dimeric_12_1 SELEX - 43201335 43201346 8.0E-06 AGCCCCCAGGCA 12 TFAP2A_TFAP_DBD_dimeric_12_1 SELEX - 43209088 43209099 8.0E-06 CGCCCTGAGGCA 12 FOXO1_forkhead_DBD_putatively-multimeric_12_1 SELEX + 43206132 43206143 1.0E-06 TTTCCCCACAGG 12 POU3F2_POU_DBD_monomeric_12_1 SELEX - 43209730 43209741 9.0E-06 TTATGCTAAACA 12 DPRX_homeodomain_DBD_monomeric_11_1 SELEX + 43206183 43206193 1.0E-06 CGGATAATCCC 11 RXRA_nuclearreceptor_full_dimeric_14_1 SELEX - 43206263 43206276 9.0E-06 AAAGTCAAAGGGCA 14 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 43203150 43203162 8.0E-06 AGAAATGAAAACA 13 DPRX_homeodomain_DBD_monomeric_10_1 SELEX - 43206185 43206194 2.0E-06 AGGGATTATC 10 Tcfap2a_TFAP_DBD_dimeric_12_1 SELEX - 43201335 43201346 9.0E-06 AGCCCCCAGGCA 12 Tcfap2a_TFAP_DBD_dimeric_12_1 SELEX - 43209088 43209099 6.0E-06 CGCCCTGAGGCA 12 RREB1_MA0073.1 JASPAR + 43206195 43206214 2.0E-06 AACCCAAACACCAGCCCTGG 20 V_GEN_INI_B_M00315 TRANSFAC - 43203022 43203029 1.0E-05 CCTCATTT 8 V_DEC2_Q2_M01843 TRANSFAC + 43207078 43207087 9.0E-06 CTTCACGTGG 10 V_FLI1_Q6_M01208 TRANSFAC + 43203118 43203128 1.0E-06 CAGGAAGTCAT 11 V_FXR_Q3_M00631 TRANSFAC - 43209212 43209225 5.0E-06 TAAGTGCAGTGAAT 14 V_GATA1_Q6_M02004 TRANSFAC - 43209021 43209035 9.0E-06 GAGGGTGATAAGAAC 15 V_TCFE2A_04_M02927 TRANSFAC - 43209679 43209695 0.0E+00 AAGGCCAGATGTTTTCA 17 V_NF1_Q6_01_M00806 TRANSFAC - 43209197 43209213 0.0E+00 ATGGAAATATGCCAAGA 17 V_HMGIY_Q3_M01010 TRANSFAC + 43203359 43203373 8.0E-06 GTTTGATTTTTTTGA 15 V_ETS_B_M00340 TRANSFAC + 43203116 43203129 5.0E-06 TGCAGGAAGTCATC 14 V_IK_Q5_M01169 TRANSFAC - 43209031 43209040 5.0E-06 GTTGGGAGGG 10 V_AR_Q6_01_M01996 TRANSFAC - 43203027 43203041 8.0E-06 GAAGATTTTGTTCCT 15 V_SP1_Q6_01_M00931 TRANSFAC - 43206063 43206072 4.0E-06 GGGGCGGGGC 10 V_IRF_Q6_01_M00972 TRANSFAC + 43203150 43203160 8.0E-06 AGAAATGAAAA 11 V_HNF4_Q6_M00967 TRANSFAC - 43206219 43206227 7.0E-06 AAAGTCCAT 9 V_RP58_01_M00532 TRANSFAC + 43209681 43209692 1.0E-06 AAAACATCTGGC 12 V_EVI1_02_M00079 TRANSFAC + 43201300 43201310 1.0E-05 AGACAAGACCG 11 V_EAR2_Q2_M01728 TRANSFAC + 43206220 43206233 5.0E-06 TGGACTTTGCTCTT 14 V_EAR2_Q2_M01728 TRANSFAC + 43206263 43206276 1.0E-06 TGCCCTTTGACTTT 14 V_AP2_Q6_01_M00915 TRANSFAC - 43201335 43201347 9.0E-06 CAGCCCCCAGGCA 13 V_STAT5B_01_M00459 TRANSFAC + 43209051 43209065 6.0E-06 AGATTCCCGGAACTA 15 V_STAT5B_01_M00459 TRANSFAC - 43209051 43209065 4.0E-06 TAGTTCCGGGAATCT 15 V_GATA_C_M00203 TRANSFAC - 43209020 43209030 3.0E-06 TGATAAGAACT 11 V_STAT6_01_M00494 TRANSFAC + 43209205 43209212 7.0E-06 TATTTCCA 8 V_HNF4A_03_M02220 TRANSFAC - 43206220 43206232 1.0E-06 AGAGCAAAGTCCA 13 V_NERF_Q2_M00531 TRANSFAC - 43203211 43203228 9.0E-06 CAGCAGGATGCAGGTGAG 18 V_PU1_Q4_M01172 TRANSFAC - 43203022 43203040 0.0E+00 AAGATTTTGTTCCTCATTT 19 V_NFAT2_01_M01748 TRANSFAC - 43209205 43209213 6.0E-06 ATGGAAATA 9 V_NR3C1_01_M02219 TRANSFAC - 43203026 43203043 7.0E-06 AGGAAGATTTTGTTCCTC 18 V_TRF1_01_M01237 TRANSFAC - 43206188 43206202 6.0E-06 TTTGGGTTAGGGATT 15 V_ELF4_04_M02850 TRANSFAC - 43203359 43203375 2.0E-06 TCTCAAAAAAATCAAAC 17 V_GEN_INI3_B_M00314 TRANSFAC - 43203022 43203029 1.0E-05 CCTCATTT 8 V_HNF4_01_B_M00411 TRANSFAC - 43206219 43206233 3.0E-06 AAGAGCAAAGTCCAT 15 V_HNF4_01_B_M00411 TRANSFAC - 43206262 43206276 7.0E-06 AAAGTCAAAGGGCAG 15 V_COUP_01_M00158 TRANSFAC + 43206220 43206233 8.0E-06 TGGACTTTGCTCTT 14 V_STAT1_01_M00224 TRANSFAC + 43209048 43209068 4.0E-06 CTGAGATTCCCGGAACTATAA 21 V_AP2BETA_Q3_M01858 TRANSFAC + 43201244 43201259 3.0E-06 GCTGGTGCCTGAGGGC 16 V_AP2BETA_Q3_M01858 TRANSFAC + 43201330 43201345 2.0E-06 GTGTATGCCTGGGGGC 16 V_IRF_Q6_M00772 TRANSFAC - 43203150 43203164 4.0E-06 GCTGTTTTCATTTCT 15 V_LEF1_03_M02878 TRANSFAC - 43203346 43203361 3.0E-06 AACGATCAATCAATCC 16 V_HOX13_01_M00023 TRANSFAC + 43206827 43206856 1.0E-06 TCTCTTCCACCTCATTAGCAATCCCCTCAC 30 V_PBX1_01_M00096 TRANSFAC - 43203349 43203357 2.0E-06 ATCAATCAA 9 V_REST_01_M01256 TRANSFAC + 43203173 43203194 5.0E-06 GCTGGGTACTGTCCAGGGCCCG 22 V_SPIB_01_M01204 TRANSFAC + 43203021 43203037 5.0E-06 CAAATGAGGAACAAAAT 17 V_CRX_02_M01436 TRANSFAC - 43206183 43206198 3.0E-06 GGTTAGGGATTATCCG 16 V_HNF4A_Q6_01_M02016 TRANSFAC - 43206217 43206231 4.0E-06 GAGCAAAGTCCATCC 15 V_SP4_Q5_M01273 TRANSFAC + 43206063 43206073 2.0E-06 GCCCCGCCCCG 11 V_POU6F1_02_M01462 TRANSFAC - 43206832 43206848 2.0E-06 ATTGCTAATGAGGTGGA 17 V_TAL1_01_M01591 TRANSFAC - 43205860 43205872 6.0E-06 TCTCCTTCTCTGC 13 V_HNF4_Q6_01_M01031 TRANSFAC - 43206219 43206232 1.0E-06 AGAGCAAAGTCCAT 14 V_GEN_INI2_B_M00313 TRANSFAC - 43203022 43203029 1.0E-05 CCTCATTT 8 V_TCF7L2_04_M02922 TRANSFAC - 43203346 43203361 7.0E-06 AACGATCAATCAATCC 16 V_TCFAP2B_03_M02820 TRANSFAC - 43209087 43209100 8.0E-06 GCGCCCTGAGGCAA 14 V_STAT_01_M00223 TRANSFAC + 43209054 43209062 7.0E-06 TTCCCGGAA 9 V_PBX1_02_M00124 TRANSFAC - 43203346 43203360 2.0E-06 ACGATCAATCAATCC 15 V_PBX1_03_M01017 TRANSFAC - 43203348 43203359 3.0E-06 CGATCAATCAAT 12 V_TITF1_Q3_M00432 TRANSFAC + 43203077 43203086 8.0E-06 TCTCAAGTTT 10 V_PBX_Q3_M00998 TRANSFAC + 43203347 43203358 3.0E-06 GATTGATTGATC 12 V_STAT5A_01_M00457 TRANSFAC + 43209051 43209065 3.0E-06 AGATTCCCGGAACTA 15 V_STAT5A_01_M00457 TRANSFAC - 43209051 43209065 4.0E-06 TAGTTCCGGGAATCT 15 V_POU6F1_03_M01479 TRANSFAC - 43206832 43206848 2.0E-06 ATTGCTAATGAGGTGGA 17 V_NFE2_Q6_M02104 TRANSFAC + 43206108 43206123 6.0E-06 AATGACCCAGCTGCCC 16 V_HNF1A_Q5_M02013 TRANSFAC - 43206817 43206827 5.0E-06 AGTTAAACATT 11 V_EKLF_Q5_M01874 TRANSFAC + 43203204 43203213 5.0E-06 CCACACCCTC 10 V_PBX1_Q3_M02028 TRANSFAC - 43203349 43203357 2.0E-06 ATCAATCAA 9 V_DEC_Q1_M00997 TRANSFAC - 43207077 43207089 6.0E-06 AGCCACGTGAAGA 13 V_NF1_Q6_M00193 TRANSFAC + 43209197 43209214 2.0E-06 TCTTGGCATATTTCCATT 18

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.