Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

FAM163A Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 148753 family with sequence similarity 163, member A chr1 + 179707297 - 179712797 179712297 Transcription Factor Binding Sites   Download all TFBS in the FAM163A promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU4F2_POU_full_monomeric_16_1 SELEX - 179715195 179715210 6.0E-06 CTTAATAAGAAATTAG 16 NF-kappaB_MA0061.1 JASPAR + 179714612 179714621 7.0E-06 GGGATTTTCC 10 MSX2_homeodomain_DBD_dimeric_18_1 SELEX - 179715196 179715213 0.0E+00 GTACTTAATAAGAAATTA 18 BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 179715090 179715106 4.0E-06 TATTTATAACCCCATTA 17 BARX1_homeodomain_DBD_dimeric_17_1 SELEX - 179715196 179715212 0.0E+00 TACTTAATAAGAAATTA 17 Msx3_homeodomain_DBD_dimeric_18_1 SELEX - 179715196 179715213 0.0E+00 GTACTTAATAAGAAATTA 18 HESX1_homeodomain_DBD_dimeric_15_1 SELEX - 179715195 179715209 2.0E-06 TTAATAAGAAATTAG 15 LHX9_homeodomain_DBD_dimeric_13_1 SELEX + 179715196 179715208 1.0E-06 TAATTTCTTATTA 13 Myf_MA0055.1 JASPAR - 179713006 179713017 4.0E-06 CAGCAGCAGCAG 12 THRB_nuclearreceptor_DBD_dimeric_19_1 SELEX - 179714379 179714397 1.0E-05 GTATGCCTGATGAGGTCAC 19 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 179715089 179715106 9.0E-06 ATATTTATAACCCCATTA 18 MSX1_homeodomain_DBD_dimeric_18_1 SELEX - 179715196 179715213 0.0E+00 GTACTTAATAAGAAATTA 18 TBX1_TBX_DBD_dimeric_20_1 SELEX - 179711913 179711932 1.0E-06 GGGTGTGATTAGAGCTGTGA 20 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 179715136 179715149 6.0E-06 GTAAACAGCCAGCA 14 V_NFKAPPAB65_01_M00052 TRANSFAC + 179714612 179714621 7.0E-06 GGGATTTTCC 10 V_NFKB_C_M00208 TRANSFAC + 179714611 179714622 6.0E-06 TGGGATTTTCCT 12 V_DBX1_01_M01483 TRANSFAC + 179715196 179715212 8.0E-06 TAATTTCTTATTAAGTA 17 V_FOXP3_Q4_M00992 TRANSFAC - 179714123 179714139 5.0E-06 GAACGTCTGTTACATGC 17 V_NFKB_Q6_01_M00774 TRANSFAC - 179714611 179714626 6.0E-06 GATCAGGAAAATCCCA 16 V_CDX2_Q5_01_M01659 TRANSFAC - 179715089 179715099 8.0E-06 GTTATAAATAT 11 V_MEQCJUN_02_M02048 TRANSFAC - 179714379 179714389 9.0E-06 GATGAGGTCAC 11 V_GABPA_02_M02074 TRANSFAC + 179712025 179712034 4.0E-06 GCCGGAAATA 10 V_SMAD3_Q6_01_M01888 TRANSFAC + 179713982 179713994 7.0E-06 AGCCAGACACATG 13 V_ZFX_01_M01593 TRANSFAC + 179712441 179712456 5.0E-06 GGGGAGGCCGCGGAGC 16 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC - 179713183 179713194 4.0E-06 AAAAATCACCAG 12 V_ESE1_01_M01977 TRANSFAC + 179712025 179712034 6.0E-06 GCCGGAAATA 10 V_NKX62_Q2_M00489 TRANSFAC - 179715088 179715099 1.0E-05 GTTATAAATATC 12 V_MEF2A_Q6_M02024 TRANSFAC + 179715090 179715099 3.0E-06 TATTTATAAC 10 V_LXRB_RXRA_Q5_M02021 TRANSFAC - 179714373 179714387 0.0E+00 TGAGGTCACTGAATG 15 V_RPC155_01_M01798 TRANSFAC + 179715168 179715183 9.0E-06 TCAAGGGTTTAACTCC 16 V_MYF_01_M01302 TRANSFAC - 179713006 179713017 4.0E-06 CAGCAGCAGCAG 12 V_AMEF2_Q6_M00403 TRANSFAC - 179715085 179715102 7.0E-06 GGGGTTATAAATATCTCT 18 V_CDX2_Q5_M00729 TRANSFAC + 179715087 179715100 3.0E-06 AGATATTTATAACC 14 V_HNF1_Q6_01_M01011 TRANSFAC - 179715194 179715214 1.0E-05 TGTACTTAATAAGAAATTAGT 21 V_MEF2_03_M00232 TRANSFAC - 179715084 179715105 7.0E-06 AATGGGGTTATAAATATCTCTT 22 V_SOX12_04_M02900 TRANSFAC + 179715181 179715196 5.0E-06 TCCTACACAAAGGACT 16 V_PBX1_05_M01967 TRANSFAC - 179715159 179715172 3.0E-06 CTTGAGTGACAGAG 14 V_FOXO1_Q5_M01216 TRANSFAC - 179714468 179714476 1.0E-05 AAAAACAGA 9 V_GATA4_Q3_M00632 TRANSFAC - 179714466 179714477 8.0E-06 AAAAAACAGAGA 12 V_GR_Q6_02_M01836 TRANSFAC + 179714393 179714405 3.0E-06 CATACTGTTCTGG 13 V_PTF1BETA_Q6_M00657 TRANSFAC - 179713183 179713196 8.0E-06 GGAAAAATCACCAG 14 V_MTF1_06_M02882 TRANSFAC - 179715195 179715208 8.0E-06 TAATAAGAAATTAG 14 V_TBP_01_M00471 TRANSFAC - 179715090 179715097 4.0E-06 TATAAATA 8 V_TTF1_Q5_M02034 TRANSFAC - 179715164 179715177 0.0E+00 AAACCCTTGAGTGA 14 V_TAL1_01_M01591 TRANSFAC + 179715150 179715162 0.0E+00 CTTCCTTCTCTCT 13 V_NANOG_01_M01123 TRANSFAC - 179714500 179714511 1.0E-06 GGGGTCATTTCC 12 V_MEIS1_01_M00419 TRANSFAC - 179713840 179713851 7.0E-06 AAATGACAGGAG 12 V_LXRA_RXRA_Q3_M00647 TRANSFAC - 179714375 179714389 3.0E-06 GATGAGGTCACTGAA 15 V_NFKAPPAB_01_M00054 TRANSFAC + 179714612 179714621 8.0E-06 GGGATTTTCC 10 V_MEF2_01_M00006 TRANSFAC - 179715085 179715100 4.0E-06 GGTTATAAATATCTCT 16 V_MEF2A_05_M01301 TRANSFAC - 179715089 179715100 9.0E-06 GGTTATAAATAT 12 V_HMEF2_Q6_M00406 TRANSFAC - 179715085 179715100 1.0E-06 GGTTATAAATATCTCT 16 V_DEC_Q1_M00997 TRANSFAC - 179712285 179712297 4.0E-06 GGCCAAGTGAAGC 13 V_ARID5A_04_M02840 TRANSFAC - 179715196 179715212 5.0E-06 TACTTAATAAGAAATTA 17 V_SOX9_Q4_M01284 TRANSFAC + 179715185 179715195 7.0E-06 ACACAAAGGAC 11 V_ELF4_02_M02056 TRANSFAC + 179712025 179712034 4.0E-06 GCCGGAAATA 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.