Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

DIRAS1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 148252 DIRAS family, GTP-binding RAS-like 1 chr19 - 2720890 - 2726390 2721390 Transcription Factor Binding Sites   Download all TFBS in the DIRAS1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SOX2_HMG_full_dimeric_17_1 SELEX - 2722075 2722091 9.0E-06 GAACACAAACATTTTCC 17 MEF2D_MADS_DBD_dimeric_12_1 SELEX + 2723282 2723293 3.0E-06 GCTATTTATAGC 12 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 2723282 2723293 0.0E+00 GCTATAAATAGC 12 TBP_MA0108.2 JASPAR - 2723278 2723292 3.0E-06 CTATAAATAGCAGCC 15 EWSR1-FLI1_MA0149.1 JASPAR - 2723135 2723152 3.0E-06 GAGACGAAGGCAGGCAGG 18 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 2723282 2723293 5.0E-06 GCTATTTATAGC 12 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 2723282 2723293 0.0E+00 GCTATAAATAGC 12 Creb5_bZIP_DBD_dimeric_12_1 SELEX + 2723016 2723027 4.0E-06 AGTGACGTCACT 12 Creb5_bZIP_DBD_dimeric_12_1 SELEX - 2723016 2723027 4.0E-06 AGTGACGTCACT 12 Hic1_C2H2_DBD_monomer_9_1 SELEX + 2720049 2720057 7.0E-06 ATGCCAACT 9 JDP2_bZIP_full_dimeric_12_1 SELEX + 2723016 2723027 9.0E-06 AGTGACGTCACT 12 JDP2_bZIP_full_dimeric_12_1 SELEX - 2723016 2723027 9.0E-06 AGTGACGTCACT 12 MEF2B_MADS_full_dimeric_12_1 SELEX + 2723282 2723293 2.0E-06 GCTATTTATAGC 12 MEF2B_MADS_full_dimeric_12_1 SELEX - 2723282 2723293 0.0E+00 GCTATAAATAGC 12 Tcfcp2l1_MA0145.1 JASPAR + 2723212 2723225 9.0E-06 CCAGCTCAGGCCGG 14 MEF2A_MA0052.1 JASPAR + 2723283 2723292 0.0E+00 CTATTTATAG 10 MEF2A_MA0052.1 JASPAR - 2723283 2723292 6.0E-06 CTATAAATAG 10 ATF7_bZIP_DBD_dimeric_14_1 SELEX + 2723015 2723028 5.0E-06 GAGTGACGTCACTG 14 ATF7_bZIP_DBD_dimeric_14_1 SELEX - 2723015 2723028 4.0E-06 CAGTGACGTCACTC 14 SP1_MA0079.2 JASPAR - 2721075 2721084 3.0E-06 CCCCTCCCCC 10 CREB3_bZIP_full_dimeric_14_1 SELEX + 2723015 2723028 5.0E-06 GAGTGACGTCACTG 14 CREB3_bZIP_full_dimeric_14_1 SELEX - 2723015 2723028 2.0E-06 CAGTGACGTCACTC 14 Foxd3_MA0041.1 JASPAR + 2722078 2722089 5.0E-06 AAATGTTTGTGT 12 Stat3_MA0144.1 JASPAR + 2719960 2719969 7.0E-06 TGCCAGGAAA 10 TFEC_bHLH_DBD_dimeric_10_1 SELEX - 2720056 2720065 8.0E-06 ATCACATGAG 10 RREB1_MA0073.1 JASPAR - 2720124 2720143 0.0E+00 CCCCCCACCACCAGCACCCC 20 V_HNF3B_01_M00131 TRANSFAC + 2722076 2722090 8.0E-06 GAAAATGTTTGTGTT 15 V_ATF_01_M00017 TRANSFAC - 2723015 2723028 5.0E-06 CAGTGACGTCACTC 14 V_BACH2_01_M00490 TRANSFAC - 2723231 2723241 5.0E-06 CATGAGTCAGC 11 V_FOXD3_01_M00130 TRANSFAC + 2722078 2722089 3.0E-06 AAATGTTTGTGT 12 V_CREB_Q4_01_M00917 TRANSFAC - 2723018 2723028 7.0E-06 CAGTGACGTCA 11 V_MEF2_02_M00231 TRANSFAC - 2723278 2723299 0.0E+00 CTGGGAGCTATAAATAGCAGCC 22 V_NFAT3_Q3_M01734 TRANSFAC - 2722074 2722083 3.0E-06 ACATTTTCCT 10 V_SP1_03_M02281 TRANSFAC - 2721075 2721084 3.0E-06 CCCCTCCCCC 10 V_JUNDM2_03_M02772 TRANSFAC + 2723014 2723029 5.0E-06 TGAGTGACGTCACTGT 16 V_JUNDM2_03_M02772 TRANSFAC - 2723014 2723029 9.0E-06 ACAGTGACGTCACTCA 16 V_MEF2A_Q6_M02024 TRANSFAC + 2723284 2723293 2.0E-06 TATTTATAGC 10 V_NFY_C_M00209 TRANSFAC + 2720060 2720073 2.0E-06 TGTGATTGGCTGCC 14 V_RPC155_01_M01798 TRANSFAC - 2720341 2720356 8.0E-06 TCAGGGATTCCAGACC 16 V_BACH1_01_M00495 TRANSFAC - 2723229 2723243 9.0E-06 CGCATGAGTCAGCCT 15 V_GC_01_M00255 TRANSFAC - 2723112 2723125 2.0E-06 AAGGGGCAGGGCTG 14 V_TATA_01_M00252 TRANSFAC - 2723278 2723292 3.0E-06 CTATAAATAGCAGCC 15 Hand1_Tcfe2a_MA0092.1 JASPAR + 2720341 2720350 4.0E-06 GGTCTGGAAT 10 V_ZBP89_Q4_M01816 TRANSFAC - 2721074 2721083 4.0E-06 CCCTCCCCCA 10 V_RSRFC4_Q2_M00407 TRANSFAC - 2723279 2723295 1.0E-06 GAGCTATAAATAGCAGC 17 V_RSRFC4_Q2_M00407 TRANSFAC + 2723280 2723296 1.0E-06 CTGCTATTTATAGCTCC 17 V_MAZ_Q6_01_M02023 TRANSFAC + 2721075 2721088 6.0E-06 GGGGGAGGGGAGGC 14 V_PAX5_01_M00143 TRANSFAC - 2722952 2722979 9.0E-06 CCTGCAGGCAGCCATGTAGAGCAGAAGC 28 V_MEF2_03_M00232 TRANSFAC + 2723276 2723297 9.0E-06 GCGGCTGCTATTTATAGCTCCC 22 V_MEF2_03_M00232 TRANSFAC - 2723278 2723299 0.0E+00 CTGGGAGCTATAAATAGCAGCC 22 V_CREBATF_Q6_M00981 TRANSFAC + 2723017 2723025 9.0E-06 GTGACGTCA 9 V_CREBATF_Q6_M00981 TRANSFAC - 2723018 2723026 9.0E-06 GTGACGTCA 9 V_REST_01_M01256 TRANSFAC + 2721090 2721111 1.0E-06 GCCGGGAGCTGTCCAAGGTGAG 22 V_MEF2_04_M00233 TRANSFAC - 2723278 2723299 8.0E-06 CTGGGAGCTATAAATAGCAGCC 22 V_PBX1_05_M01967 TRANSFAC + 2723012 2723025 6.0E-06 TGTGAGTGACGTCA 14 V_AP1_C_M00199 TRANSFAC - 2723232 2723240 3.0E-06 ATGAGTCAG 9 V_MEF2_Q6_01_M00941 TRANSFAC + 2723281 2723292 2.0E-06 TGCTATTTATAG 12 V_AP1_01_M00517 TRANSFAC - 2723230 2723242 1.0E-06 GCATGAGTCAGCC 13 V_STAT3_03_M01595 TRANSFAC + 2719958 2719973 1.0E-06 TTTGCCAGGAAAAGAA 16 V_AP1_Q2_01_M00924 TRANSFAC + 2723233 2723244 4.0E-06 TGACTCATGCGT 12 V_CREM_Q6_M01820 TRANSFAC - 2723015 2723025 3.0E-06 TGACGTCACTC 11 V_CREM_Q6_M01820 TRANSFAC + 2723018 2723028 3.0E-06 TGACGTCACTG 11 V_VJUN_01_M00036 TRANSFAC + 2723014 2723029 2.0E-06 TGAGTGACGTCACTGT 16 V_VJUN_01_M00036 TRANSFAC - 2723014 2723029 1.0E-06 ACAGTGACGTCACTCA 16 V_TBP_01_M00471 TRANSFAC - 2723284 2723291 4.0E-06 TATAAATA 8 V_CREBP1_Q2_M00179 TRANSFAC + 2723016 2723027 0.0E+00 AGTGACGTCACT 12 V_CREBP1_Q2_M00179 TRANSFAC - 2723016 2723027 0.0E+00 AGTGACGTCACT 12 V_ATF1_03_M02738 TRANSFAC + 2723014 2723029 3.0E-06 TGAGTGACGTCACTGT 16 V_ATF1_03_M02738 TRANSFAC - 2723014 2723029 2.0E-06 ACAGTGACGTCACTCA 16 V_NFY_01_M00287 TRANSFAC - 2720058 2720073 9.0E-06 GGCAGCCAATCACATG 16 V_RSRFC4_01_M00026 TRANSFAC + 2723280 2723295 0.0E+00 CTGCTATTTATAGCTC 16 V_RSRFC4_01_M00026 TRANSFAC - 2723280 2723295 1.0E-06 GAGCTATAAATAGCAG 16 V_ZFP281_01_M01597 TRANSFAC + 2721074 2721084 1.0E-06 TGGGGGAGGGG 11 V_ZFP281_04_M02831 TRANSFAC - 2721072 2721086 2.0E-06 CTCCCCTCCCCCACC 15 V_EWSR1FLI1_01_M02252 TRANSFAC - 2723135 2723152 3.0E-06 GAGACGAAGGCAGGCAGG 18 V_NFE2_Q6_M02104 TRANSFAC - 2723226 2723241 8.0E-06 CATGAGTCAGCCTGCC 16 V_MEF2A_05_M01301 TRANSFAC + 2723281 2723292 2.0E-06 TGCTATTTATAG 12 V_MEF2A_05_M01301 TRANSFAC - 2723283 2723294 5.0E-06 AGCTATAAATAG 12 V_UF1H3BETA_Q6_M01068 TRANSFAC + 2721072 2721085 0.0E+00 GGTGGGGGAGGGGA 14 V_TFE_Q6_M01029 TRANSFAC + 2720057 2720064 1.0E-05 TCATGTGA 8 V_NFYA_Q5_M02106 TRANSFAC - 2720058 2720071 1.0E-06 CAGCCAATCACATG 14 V_ATF_B_M00338 TRANSFAC - 2723015 2723026 5.0E-06 GTGACGTCACTC 12 V_ATF_B_M00338 TRANSFAC + 2723017 2723028 4.0E-06 GTGACGTCACTG 12 V_STAT1_05_M01260 TRANSFAC + 2719957 2719978 2.0E-06 ATTTGCCAGGAAAAGAAAAGAG 22 V_PAX4_04_M00380 TRANSFAC - 2720075 2720104 6.0E-06 AGAAATTACTATGCATGTAGTCCACAAACC 30 V_SMAD1_01_M01590 TRANSFAC + 2719966 2719977 8.0E-06 GAAAAGAAAAGA 12

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.