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TMC4


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
147798 transmembrane channel-like 4 chr19 -54676444 - 54681944 54676944

Transcription Factor Binding Sites

 
Download all TFBS in the TMC4 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
CTCF_MA0139.1 JASPAR + 54672403 54672421 0.0E+00 TGGCCTGCAGGGGGCAGCA 19
CTCF_MA0139.1 JASPAR + 54676893 54676911 6.0E-06 TGGCCAGCAGGTGGCCCGG 19
EWSR1-FLI1_MA0149.1 JASPAR - 54672488 54672505 2.0E-06 GAAAGAAAGGAAGGCGCG 18
EWSR1-FLI1_MA0149.1 JASPAR - 54672492 54672509 0.0E+00 GAAAGAAAGAAAGGAAGG 18
BARHL2_homeodomain_full_monomeric_10_1 SELEX - 54677072 54677081 5.0E-06 GATAAACGGT 10
ERF_ETS_DBD_monomeric_10_1 SELEX - 54676925 54676934 9.0E-06 ACAGGAAGTG 10
RUNX1_MA0002.2 JASPAR + 54676929 54676939 2.0E-06 TCCTGTGGTTT 11
V_MEIS1BHOXA9_02_M00421 TRANSFAC + 54677000 54677013 8.0E-06 TGACAGTTTGGTTC 14
V_ER_Q6_02_M00959 TRANSFAC - 54677143 54677153 1.0E-06 CAGGTCACCGT 11
V_E2A_Q6_01_M02088 TRANSFAC - 54676896 54676908 0.0E+00 GGCCACCTGCTGG 13
V_PREP1_01_M01459 TRANSFAC + 54677145 54677160 7.0E-06 GGTGACCTGTCATAGG 16
V_GABP_B_M00341 TRANSFAC - 54676923 54676934 7.0E-06 ACAGGAAGTGTA 12
V_RUNX1_01_M02257 TRANSFAC + 54676929 54676939 2.0E-06 TCCTGTGGTTT 11
V_PAX5_01_M00143 TRANSFAC - 54676794 54676821 3.0E-06 GCCTGGGCCATGGAAGAAAACCCGACCT 28
V_TEL2_Q6_M00678 TRANSFAC + 54676924 54676933 8.0E-06 ACACTTCCTG 10
V_CETS1P54_01_M00032 TRANSFAC - 54676925 54676934 9.0E-06 ACAGGAAGTG 10
V_CTCF_02_M01259 TRANSFAC + 54672400 54672419 1.0E-06 AACTGGCCTGCAGGGGGCAG 20
V_CTCF_02_M01259 TRANSFAC + 54676890 54676909 5.0E-06 ACCTGGCCAGCAGGTGGCCC 20
V_CTCF_01_M01200 TRANSFAC + 54672402 54672421 0.0E+00 CTGGCCTGCAGGGGGCAGCA 20
V_CTCF_01_M01200 TRANSFAC + 54676892 54676911 5.0E-06 CTGGCCAGCAGGTGGCCCGG 20
V_MEIS1_01_M00419 TRANSFAC - 54677148 54677159 1.0E-06 CTATGACAGGTC 12
V_E47_01_M00002 TRANSFAC + 54676896 54676910 5.0E-06 CCAGCAGGTGGCCCG 15
V_MEF3_B_M00319 TRANSFAC + 54672428 54672440 8.0E-06 GGCTCAGGTTCCT 13
V_EWSR1FLI1_01_M02252 TRANSFAC - 54672488 54672505 2.0E-06 GAAAGAAAGGAAGGCGCG 18
V_EWSR1FLI1_01_M02252 TRANSFAC - 54672492 54672509 0.0E+00 GAAAGAAAGAAAGGAAGG 18
V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC + 54676932 54676939 1.0E-05 TGTGGTTT 8
V_LPOLYA_B_M00318 TRANSFAC - 54677121 54677128 7.0E-06 CAATAAAG 8
V_NANOG_02_M01247 TRANSFAC - 54672491 54672510 8.0E-06 AGAAAGAAAGAAAGGAAGGC 20
V_NANOG_02_M01247 TRANSFAC - 54672495 54672514 3.0E-06 GAAAAGAAAGAAAGAAAGGA 20
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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