Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

PROCA1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 147011 protein interacting with cyclin A1 chr17 - 27038372 - 27043872 27038872 Transcription Factor Binding Sites   Download all TFBS in the PROCA1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SPIC_ETS_full_monomeric_14_1 SELEX - 27039367 27039380 9.0E-06 AGAAAGGGGAAGCC 14 FOXA1_MA0148.1 JASPAR + 27037570 27037580 4.0E-06 TGTTTACTCTC 11 EWSR1-FLI1_MA0149.1 JASPAR + 27037632 27037649 5.0E-06 GAGACGAGGGGAGGAAGG 18 EWSR1-FLI1_MA0149.1 JASPAR + 27038022 27038039 2.0E-06 GGAAGGGAGGGAAGAAAC 18 EWSR1-FLI1_MA0149.1 JASPAR + 27038043 27038060 1.0E-06 GAGAGGAAGGAGGGAAGA 18 EWSR1-FLI1_MA0149.1 JASPAR + 27038047 27038064 9.0E-06 GGAAGGAGGGAAGAGGAG 18 EWSR1-FLI1_MA0149.1 JASPAR + 27038056 27038073 1.0E-06 GAAGAGGAGGAAGCAAGG 18 EWSR1-FLI1_MA0149.1 JASPAR + 27038060 27038077 6.0E-06 AGGAGGAAGCAAGGGAGG 18 Pax4_MA0068.1 JASPAR + 27037528 27037557 4.0E-06 AAAAAAAAAAAAAAAAAAAAGCACACATGC 30 Pax4_MA0068.1 JASPAR + 27037529 27037558 3.0E-06 AAAAAAAAAAAAAAAAAAAGCACACATGCA 30 SOX8_HMG_full_dimeric_13_1 SELEX + 27038766 27038778 7.0E-06 GTGAACTCCAGTC 13 PBX1_MA0070.1 JASPAR + 27038378 27038389 9.0E-06 TCCTCAATCATT 12 FOXI1_forkhead_full_dimeric_17_1 SELEX - 27037569 27037585 7.0E-06 GAGTGGAGAGTAAACAG 17 NR3C1_MA0113.1 JASPAR - 27037901 27037918 6.0E-06 GGGAGGATTCTGTACAGA 18 SPI1_ETS_full_monomeric_14_1 SELEX - 27039367 27039380 8.0E-06 AGAAAGGGGAAGCC 14 TBX1_TBX_DBD_dimeric_20_1 SELEX + 27037806 27037825 1.0E-06 TAGGGTGAAAGAAAGTGGGA 20 V_MEQ_01_M02049 TRANSFAC + 27037779 27037787 7.0E-06 AACACACAC 9 V_FOXP1_01_M00987 TRANSFAC - 27037536 27037555 6.0E-06 ATGTGTGCTTTTTTTTTTTT 20 V_FOXP1_01_M00987 TRANSFAC - 27037538 27037557 7.0E-06 GCATGTGTGCTTTTTTTTTT 20 V_AP2ALPHA_Q6_M01857 TRANSFAC + 27038412 27038422 6.0E-06 CGCCCCCGGCC 11 V_TCF3_01_M01594 TRANSFAC - 27039208 27039220 3.0E-06 TTTTTGTATTTTT 13 V_SOX14_05_M02902 TRANSFAC + 27037781 27037795 9.0E-06 CACACACAATGAATG 15 V_ZFP410_04_M02936 TRANSFAC + 27038570 27038586 9.0E-06 CTGCCCCGCCCCTCTTA 17 V_ZFX_01_M01593 TRANSFAC - 27038263 27038278 7.0E-06 GCGCAGGCCGCTGCCC 16 V_HMGIY_Q3_M01010 TRANSFAC - 27039205 27039219 5.0E-06 TTTTGTATTTTTTGT 15 V_BCL6_01_M01183 TRANSFAC - 27039207 27039222 9.0E-06 AATTTTTGTATTTTTT 16 V_SP1_Q6_01_M00931 TRANSFAC - 27038572 27038581 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC - 27039085 27039094 4.0E-06 GGGGCGGGGC 10 V_PLAG1_02_M01973 TRANSFAC + 27039074 27039089 8.0E-06 CCCCATTCTTAGCCCC 16 V_EAR2_Q2_M01728 TRANSFAC - 27037646 27037659 8.0E-06 CCCCCTTTGTCCTT 14 V_AP2_Q6_M00189 TRANSFAC + 27038341 27038352 9.0E-06 ATCCCGCGGGCG 12 V_PPAR_DR1_Q2_M00763 TRANSFAC + 27037729 27037741 4.0E-06 AGACCTCTGACCA 13 V_SP1_02_M01303 TRANSFAC - 27039127 27039137 3.0E-06 GGGGCGGGGAG 11 V_PU1_Q4_M01172 TRANSFAC - 27038058 27038076 6.0E-06 CTCCCTTGCTTCCTCCTCT 19 V_NR3C1_01_M02219 TRANSFAC - 27037901 27037918 6.0E-06 GGGAGGATTCTGTACAGA 18 V_LDSPOLYA_B_M00317 TRANSFAC + 27037566 27037581 3.0E-06 AGCCTGTTTACTCTCC 16 V_PAX_Q6_M00808 TRANSFAC - 27037707 27037717 1.0E-06 CTGGAACTAAA 11 V_WT1_Q6_01_M02036 TRANSFAC + 27038786 27038795 4.0E-06 CGCCCCCGCC 10 V_CP2_02_M00947 TRANSFAC + 27038981 27038995 4.0E-06 TCTGGTTCCAGCTTG 15 V_TRF1_01_M01237 TRANSFAC - 27038726 27038740 9.0E-06 TGAGGCTCAGGGTTG 15 V_ELF4_04_M02850 TRANSFAC + 27039202 27039218 5.0E-06 TCTACAAAAAATACAAA 17 V_KROX_Q6_M00982 TRANSFAC + 27038410 27038423 5.0E-06 CCCGCCCCCGGCCC 14 V_HNF3A_01_M01261 TRANSFAC - 27037569 27037578 7.0E-06 GAGTAAACAG 10 V_IRC900814_04_M02870 TRANSFAC + 27039514 27039529 7.0E-06 ATAGAGAGTCGTAAGC 16 V_PAX6_Q2_M00979 TRANSFAC - 27038305 27038318 3.0E-06 CAGAGCTGGAACGC 14 V_OCT1_08_M01354 TRANSFAC + 27039212 27039227 9.0E-06 ATACAAAAATTAGCTA 16 V_SP1_01_M00008 TRANSFAC - 27038805 27038814 7.0E-06 GAGGCGGGGT 10 V_MZF1_02_M00084 TRANSFAC - 27038796 27038808 1.0E-05 GGGTTAGGGGCTA 13 V_MZF1_02_M00084 TRANSFAC - 27039315 27039327 9.0E-06 GGTGGAGGGGAAA 13 V_PAX8_B_M00328 TRANSFAC + 27038708 27038725 4.0E-06 GGACTCTTGCGTGAAGTC 18 V_BCL6B_04_M02844 TRANSFAC + 27038571 27038586 7.0E-06 TGCCCCGCCCCTCTTA 16 V_SP4_Q5_M01273 TRANSFAC + 27038572 27038582 8.0E-06 GCCCCGCCCCT 11 V_SP4_Q5_M01273 TRANSFAC + 27039085 27039095 2.0E-06 GCCCCGCCCCG 11 V_CIZ_01_M00734 TRANSFAC + 27039206 27039214 6.0E-06 CAAAAAATA 9 V_LBP9_01_M01592 TRANSFAC + 27038316 27038332 2.0E-06 CTGGCTGGAACCAGACT 17 V_TAL1_01_M01591 TRANSFAC - 27038056 27038068 8.0E-06 CTTCCTCCTCTTC 13 V_CNOT3_01_M01253 TRANSFAC + 27038548 27038557 8.0E-06 GGCCGCGCCC 10 V_EWSR1FLI1_01_M02252 TRANSFAC + 27037632 27037649 5.0E-06 GAGACGAGGGGAGGAAGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 27038022 27038039 2.0E-06 GGAAGGGAGGGAAGAAAC 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 27038043 27038060 1.0E-06 GAGAGGAAGGAGGGAAGA 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 27038047 27038064 9.0E-06 GGAAGGAGGGAAGAGGAG 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 27038056 27038073 1.0E-06 GAAGAGGAGGAAGCAAGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 27038060 27038077 6.0E-06 AGGAGGAAGCAAGGGAGG 18 V_SOX1_03_M02802 TRANSFAC + 27039207 27039222 6.0E-06 AAAAAATACAAAAATT 16 V_SP1_Q2_01_M00933 TRANSFAC + 27038573 27038582 7.0E-06 CCCCGCCCCT 10 V_UF1H3BETA_Q6_M01068 TRANSFAC - 27038566 27038579 2.0E-06 GGCGGGGCAGGGGC 14 V_COUP_DR1_Q6_M00765 TRANSFAC + 27037729 27037741 5.0E-06 AGACCTCTGACCA 13 V_PAX4_04_M00380 TRANSFAC + 27037527 27037556 0.0E+00 AAAAAAAAAAAAAAAAAAAAAGCACACATG 30 V_PAX4_04_M00380 TRANSFAC + 27039207 27039236 5.0E-06 AAAAAATACAAAAATTAGCTAGTTTAGTGG 30 V_SMAD1_01_M01590 TRANSFAC + 27037646 27037657 7.0E-06 AAGGACAAAGGG 12 V_RORA2_01_M00157 TRANSFAC - 27038668 27038680 7.0E-06 CGATGTGGGTCAG 13

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.