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RTN4RL1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 146760 reticulon 4 receptor-like 1 chr17 - 1927678 - 1933178 1928178 Transcription Factor Binding Sites   Download all TFBS in the RTN4RL1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR - 1929469 1929487 1.0E-06 AGGCCAGCAGGGGGTGCCG 19 NF-kappaB_MA0061.1 JASPAR + 1927389 1927398 6.0E-06 GGGACTTCCC 10 ZBTB7A_C2H2_DBD_monomeric_12_1 SELEX - 1927459 1927470 7.0E-06 CGCGACCACCGT 12 POU3F3_POU_DBD_monomeric_12_1 SELEX - 1928758 1928769 8.0E-06 TTTCATAAATTT 12 RFX4_RFX_DBD_dimeric_16_1 SELEX + 1927065 1927080 0.0E+00 TGTTGCCATGGAAACA 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 1927065 1927080 0.0E+00 TGTTTCCATGGCAACA 16 EBF1_EBF_full_dimeric_14_1 SELEX + 1931746 1931759 9.0E-06 GGTCCCAAGGGATA 14 EBF1_EBF_full_dimeric_14_1 SELEX - 1931746 1931759 6.0E-06 TATCCCTTGGGACC 14 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX - 1931233 1931244 7.0E-06 GATTATCCCACA 12 ZBTB7B_C2H2_full_monomeric_12_1 SELEX - 1927458 1927469 2.0E-06 GCGACCACCGTA 12 EWSR1-FLI1_MA0149.1 JASPAR - 1928667 1928684 6.0E-06 GGGAGGAGGAGAGGAGGG 18 EWSR1-FLI1_MA0149.1 JASPAR - 1928675 1928692 1.0E-06 GGGAGGGAGGGAGGAGGA 18 EWSR1-FLI1_MA0149.1 JASPAR - 1928679 1928696 5.0E-06 GCAAGGGAGGGAGGGAGG 18 POU3F4_POU_DBD_monomeric_9_1 SELEX - 1924123 1924131 7.0E-06 AATGCAAAT 9 FOXD2_forkhead_DBD_dimeric_14_1 SELEX + 1930928 1930941 5.0E-06 AAAAAATGTTTAAA 14 RHOXF1_homeodomain_full_dimeric_9_1 SELEX + 1931237 1931245 3.0E-06 GGATAATCC 9 RHOXF1_homeodomain_full_dimeric_9_1 SELEX - 1931237 1931245 6.0E-06 GGATTATCC 9 RORA_nuclearreceptor_DBD_dimeric_19_1 SELEX - 1931275 1931293 1.0E-06 TTTGTGGGCTAGGGGGTCA 19 POU4F3_POU_DBD_monomeric_16_1 SELEX + 1928753 1928768 2.0E-06 ATACAAAATTTATGAA 16 OTX1_homeodomain_DBD_monomeric_8_1 SELEX - 1927085 1927092 1.0E-05 TTAATCCG 8 RFX2_RFX_DBD_dimeric_15_1 SELEX - 1923263 1923277 2.0E-06 AGTTGCTAAGTAAAG 15 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 1927065 1927080 0.0E+00 TGTTGCCATGGAAACA 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 1927065 1927080 0.0E+00 TGTTTCCATGGCAACA 16 FOXD3_forkhead_DBD_dimeric_14_1 SELEX + 1930928 1930941 6.0E-06 AAAAAATGTTTAAA 14 NFATC1_NFAT_full_dimeric_14_1 SELEX + 1927066 1927079 3.0E-06 GTTGCCATGGAAAC 14 NFATC1_NFAT_full_dimeric_14_1 SELEX - 1927066 1927079 4.0E-06 GTTTCCATGGCAAC 14 MAX_bHLH_DBD_dimer-of-dimers_17_1 SELEX + 1927362 1927378 0.0E+00 CGCGTGGCAACCACGTG 17 MAX_bHLH_DBD_dimer-of-dimers_17_1 SELEX - 1927362 1927378 0.0E+00 CACGTGGTTGCCACGCG 17 SP1_MA0079.2 JASPAR + 1928725 1928734 7.0E-06 CCCCGCCCCC 10 znf143_MA0088.1 JASPAR + 1927013 1927032 9.0E-06 CCTTCCCCATCCTGCTGTGA 20 RFX3_RFX_DBD_dimeric_15_1 SELEX - 1923263 1923277 1.0E-06 AGTTGCTAAGTAAAG 15 Gata1_MA0035.2 JASPAR + 1930939 1930949 5.0E-06 AAAGATAAAAA 11 MZF1_5-13_MA0057.1 JASPAR - 1928663 1928672 4.0E-06 GGAGGGGGAA 10 RFX2_RFX_DBD_dimeric_16_1 SELEX + 1927065 1927080 0.0E+00 TGTTGCCATGGAAACA 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 1927065 1927080 0.0E+00 TGTTTCCATGGCAACA 16 RFX4_RFX_DBD_dimeric_15_1 SELEX - 1923263 1923277 8.0E-06 AGTTGCTAAGTAAAG 15 RFX5_RFX_DBD_dimeric_16_3 SELEX + 1927065 1927080 0.0E+00 TGTTGCCATGGAAACA 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 1927065 1927080 0.0E+00 TGTTTCCATGGCAACA 16 ZBTB7C_C2H2_full_monomeric_12_1 SELEX - 1927458 1927469 1.0E-06 GCGACCACCGTA 12 MAX_MA0058.1 JASPAR + 1927370 1927379 7.0E-06 AACCACGTGG 10 Tp53_p53l_DBD_dimeric_17_1 SELEX - 1929612 1929628 6.0E-06 ACAGGGCAAAGACAAGT 17 GSC2_homeodomain_DBD_monomeric_10_1 SELEX - 1927084 1927093 2.0E-06 CTTAATCCGC 10 RORA_nuclearreceptor_DBD_dimeric_20_1 SELEX - 1927479 1927498 4.0E-06 CACAGCTCAACTTGAGGACA 20 DMBX1_homeodomain_DBD_monomeric_10_1 SELEX + 1927084 1927093 7.0E-06 GCGGATTAAG 10 DPRX_homeodomain_DBD_monomeric_11_1 SELEX + 1931236 1931246 1.0E-06 GGGATAATCCT 11 DPRX_homeodomain_DBD_monomeric_10_1 SELEX - 1931238 1931247 1.0E-05 GAGGATTATC 10 TBX1_TBX_DBD_dimeric_20_1 SELEX + 1931332 1931351 9.0E-06 GAGTGTGAGAAGCAGAGTTA 20 POU4F1_POU_DBD_monomeric_14_1 SELEX + 1928753 1928766 4.0E-06 ATACAAAATTTATG 14 RREB1_MA0073.1 JASPAR - 1931411 1931430 2.0E-06 CACCACAACACCCGCCTTCA 20 V_HOXA9_01_M01351 TRANSFAC - 1928755 1928771 4.0E-06 ACTTTCATAAATTTTGT 17 V_MEQ_01_M02049 TRANSFAC + 1929542 1929550 2.0E-06 AACACACAT 9 V_NFKB_C_M00208 TRANSFAC + 1927388 1927399 8.0E-06 CGGGACTTCCCC 12 V_NFKB_Q6_01_M00774 TRANSFAC - 1927388 1927403 9.0E-06 CACCGGGGAAGTCCCG 16 V_CDX2_Q5_01_M01659 TRANSFAC - 1928758 1928768 6.0E-06 TTCATAAATTT 11 V_GATA1_Q6_M02004 TRANSFAC + 1930936 1930950 5.0E-06 TTTAAAGATAAAAAA 15 V_ZFP410_04_M02936 TRANSFAC - 1927076 1927092 7.0E-06 TTAATCCGCCCCTGTTT 17 V_GATA2_02_M00348 TRANSFAC + 1930939 1930948 8.0E-06 AAAGATAAAA 10 TAL1_TCF3_MA0091.1 JASPAR + 1933106 1933117 1.0E-06 GGAACATCTGGT 12 V_OBOX1_01_M01450 TRANSFAC - 1931235 1931251 9.0E-06 GAAGGAGGATTATCCCA 17 V_BCL6_01_M01183 TRANSFAC - 1930927 1930942 3.0E-06 CTTTAAACATTTTTTT 16 V_BCL6_01_M01183 TRANSFAC - 1930930 1930945 9.0E-06 TATCTTTAAACATTTT 16 V_GATA3_03_M00351 TRANSFAC + 1930939 1930948 4.0E-06 AAAGATAAAA 10 V_SATB1_Q3_M01723 TRANSFAC + 1930933 1930948 1.0E-05 ATGTTTAAAGATAAAA 16 V_OCT1_Q5_01_M00930 TRANSFAC + 1924121 1924131 5.0E-06 GGATTTGCATT 11 V_EGR_Q6_M00807 TRANSFAC + 1931400 1931410 2.0E-06 GTGGGGGCGAG 11 V_OCT1_01_M00135 TRANSFAC - 1924118 1924136 9.0E-06 AACAGAATGCAAATCCAGA 19 V_POU2F3_01_M01476 TRANSFAC - 1924119 1924134 9.0E-06 CAGAATGCAAATCCAG 16 V_P50P50_Q3_M01223 TRANSFAC + 1927387 1927399 8.0E-06 GCGGGACTTCCCC 13 V_RFX4_03_M02789 TRANSFAC - 1927063 1927077 4.0E-06 TTCCATGGCAACAGA 15 V_EAR2_Q2_M01728 TRANSFAC + 1929614 1929627 3.0E-06 TTGTCTTTGCCCTG 14 V_P53_DECAMER_Q2_M00761 TRANSFAC - 1929610 1929619 1.0E-06 AGACAAGTCT 10 V_GABPA_04_M02858 TRANSFAC + 1928658 1928673 4.0E-06 CCGGCTTCCCCCTCCT 16 V_SP1_03_M02281 TRANSFAC + 1928725 1928734 7.0E-06 CCCCGCCCCC 10 V_OCT_C_M00210 TRANSFAC + 1924120 1924132 1.0E-05 TGGATTTGCATTC 13 V_SP1_02_M01303 TRANSFAC - 1928723 1928733 3.0E-06 GGGGCGGGGAG 11 V_TCFAP2E_04_M02926 TRANSFAC + 1930938 1930951 8.0E-06 TAAAGATAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 1930940 1930953 1.0E-05 AAGATAAAAAAAGA 14 V_LDSPOLYA_B_M00317 TRANSFAC + 1932403 1932418 7.0E-06 TGGCTGTCTTCTCTTT 16 V_DLX5_01_M01388 TRANSFAC - 1931465 1931480 7.0E-06 TGAGTAATTACTGCCT 16 V_P53_02_M00272 TRANSFAC + 1929610 1929619 4.0E-06 AGACTTGTCT 10 V_PAX_Q6_M00808 TRANSFAC - 1928321 1928331 6.0E-06 CTGGAGCTCAC 11 V_BARBIE_01_M00238 TRANSFAC + 1929511 1929525 1.0E-05 AGAAAAAGCGGATGG 15 V_BARBIE_01_M00238 TRANSFAC + 1930945 1930959 5.0E-06 AAAAAAAGATGGATG 15 V_FOXA2_02_M02853 TRANSFAC + 1930939 1930953 9.0E-06 AAAGATAAAAAAAGA 15 V_HOXA3_02_M01337 TRANSFAC + 1931465 1931478 1.0E-05 AGGCAGTAATTACT 14 V_KROX_Q6_M00982 TRANSFAC + 1928726 1928739 2.0E-06 CCCGCCCCCGCTCA 14 V_KROX_Q6_M00982 TRANSFAC - 1931397 1931410 2.0E-06 CTCGCCCCCACTCC 14 V_ZBP89_Q4_M01816 TRANSFAC + 1928650 1928659 6.0E-06 TCCTCCCCCC 10 V_HSF1_01_M00146 TRANSFAC + 1929434 1929443 6.0E-06 AGAAGGTTCG 10 V_FOXK1_04_M02856 TRANSFAC - 1931418 1931432 6.0E-06 TACACCACAACACCC 15 V_HOXB6_01_M01460 TRANSFAC - 1931467 1931482 2.0E-06 TCTGAGTAATTACTGC 16 V_MAZ_Q6_01_M02023 TRANSFAC - 1928645 1928658 3.0E-06 GGGGGAGGAAGGGA 14 V_MAZ_Q6_01_M02023 TRANSFAC - 1928667 1928680 8.0E-06 GGAGGAGAGGAGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC - 1928670 1928683 1.0E-06 GGAGGAGGAGAGGA 14 V_EGR1_Q6_M01873 TRANSFAC - 1928727 1928736 4.0E-06 GCGGGGGCGG 10 V_MEF2_03_M00232 TRANSFAC + 1924290 1924311 7.0E-06 AGGCTTGCTTTTAATATCCCTG 22 V_MEF2_03_M00232 TRANSFAC + 1930773 1930794 5.0E-06 CCTTGTTCTGAAGATAGATAAG 22 V_SFPI1_04_M02896 TRANSFAC - 1929583 1929596 4.0E-06 AATTTTCAGGAACA 14 V_YY1_Q6_02_M01035 TRANSFAC - 1929373 1929383 1.0E-06 TCCTCCATTTT 11 V_OCT1_04_M00138 TRANSFAC + 1930925 1930947 7.0E-06 TCAAAAAAATGTTTAAAGATAAA 23 V_PITX3_01_M01343 TRANSFAC - 1931234 1931249 5.0E-06 AGGAGGATTATCCCAC 16 V_TAL1BETAE47_01_M00065 TRANSFAC - 1933105 1933120 2.0E-06 CCCACCAGATGTTCCT 16 V_ZIC3_05_M02941 TRANSFAC - 1927020 1927034 5.0E-06 CCTCACAGCAGGATG 15 V_GATA1_09_M02254 TRANSFAC + 1930939 1930949 5.0E-06 AAAGATAAAAA 11 V_TCF7_03_M02817 TRANSFAC + 1930938 1930954 7.0E-06 TAAAGATAAAAAAAGAT 17 V_RFX_Q6_M00975 TRANSFAC + 1927064 1927072 4.0E-06 CTGTTGCCA 9 V_STAF_02_M00264 TRANSFAC + 1927014 1927034 7.0E-06 CTTCCCCATCCTGCTGTGAGG 21 V_POU6F1_01_M00465 TRANSFAC + 1928755 1928765 2.0E-06 ACAAAATTTAT 11 V_SP3_Q3_M00665 TRANSFAC - 1933125 1933138 1.0E-06 AGTCTTGTGAAGGG 14 V_CTCF_02_M01259 TRANSFAC - 1929471 1929490 9.0E-06 CCCAGGCCAGCAGGGGGTGC 20 V_NR1B1_Q6_M02110 TRANSFAC + 1932383 1932392 9.0E-06 ACAGGTCAAA 10 V_CTCF_01_M01200 TRANSFAC - 1929469 1929488 2.0E-06 CAGGCCAGCAGGGGGTGCCG 20 V_MZF1_02_M00084 TRANSFAC - 1928663 1928675 1.0E-05 AGAGGAGGGGGAA 13 V_OCT1_B_M00342 TRANSFAC - 1924122 1924131 2.0E-06 AATGCAAATC 10 V_OCT_Q6_M00795 TRANSFAC + 1924121 1924131 6.0E-06 GGATTTGCATT 11 V_SOX17_04_M02904 TRANSFAC - 1928759 1928775 2.0E-06 GAGCACTTTCATAAATT 17 V_TAL1BETAITF2_01_M00070 TRANSFAC - 1933105 1933120 4.0E-06 CCCACCAGATGTTCCT 16 V_TFIII_Q6_M00706 TRANSFAC - 1928707 1928715 6.0E-06 AGAGGGAGG 9 V_SP4_Q5_M01273 TRANSFAC + 1928724 1928734 9.0E-06 TCCCCGCCCCC 11 V_HOXB7_01_M01396 TRANSFAC - 1931465 1931480 2.0E-06 TGAGTAATTACTGCCT 16 V_HOXB7_01_M01396 TRANSFAC + 1931467 1931482 3.0E-06 GCAGTAATTACTCAGA 16 V_HOXA7_02_M01336 TRANSFAC + 1931466 1931482 6.0E-06 GGCAGTAATTACTCAGA 17 V_ZIC2_05_M02940 TRANSFAC - 1927020 1927034 7.0E-06 CCTCACAGCAGGATG 15 V_MTF1_06_M02882 TRANSFAC + 1929506 1929519 9.0E-06 AGAGAAGAAAAAGC 14 V_MTF1_06_M02882 TRANSFAC + 1930939 1930952 3.0E-06 AAAGATAAAAAAAG 14 V_TAL1_01_M01591 TRANSFAC - 1929504 1929516 2.0E-06 TTTTCTTCTCTCC 13 V_TAL1_01_M01591 TRANSFAC + 1932406 1932418 8.0E-06 CTGTCTTCTCTTT 13 V_OCT2_01_M01368 TRANSFAC - 1924119 1924134 7.0E-06 CAGAATGCAAATCCAG 16 V_OCT1_Q6_M00195 TRANSFAC - 1924120 1924134 8.0E-06 CAGAATGCAAATCCA 15 V_GATA3_02_M00350 TRANSFAC + 1930939 1930948 3.0E-06 AAAGATAAAA 10 V_IPF1_01_M01233 TRANSFAC + 1931468 1931477 8.0E-06 CAGTAATTAC 10 V_GATA6_01_M00462 TRANSFAC + 1930939 1930948 3.0E-06 AAAGATAAAA 10 V_FPM315_01_M01587 TRANSFAC - 1928675 1928686 0.0E+00 GAGGGAGGAGGA 12 V_NFAT2_02_M01749 TRANSFAC - 1927067 1927077 8.0E-06 TTCCATGGCAA 11 V_NFAT2_02_M01749 TRANSFAC + 1927068 1927078 4.0E-06 TGCCATGGAAA 11 V_SREBP_Q3_M00776 TRANSFAC + 1931086 1931097 8.0E-06 GTGCTCACCCCA 12 V_EGR1_06_M02744 TRANSFAC + 1928726 1928739 3.0E-06 CCCGCCCCCGCTCA 14 V_HOXC5_01_M01454 TRANSFAC + 1931466 1931482 9.0E-06 GGCAGTAATTACTCAGA 17 V_PBX_Q3_M00998 TRANSFAC + 1930952 1930963 9.0E-06 GATGGATGGCTG 12 V_NFKAPPAB_01_M00054 TRANSFAC + 1927389 1927398 7.0E-06 GGGACTTCCC 10 V_HB9_01_M01349 TRANSFAC - 1931465 1931480 4.0E-06 TGAGTAATTACTGCCT 16 V_SRF_06_M02916 TRANSFAC + 1930935 1930951 2.0E-06 GTTTAAAGATAAAAAAA 17 V_EWSR1FLI1_01_M02252 TRANSFAC - 1928667 1928684 6.0E-06 GGGAGGAGGAGAGGAGGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 1928675 1928692 1.0E-06 GGGAGGGAGGGAGGAGGA 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 1928679 1928696 5.0E-06 GCAAGGGAGGGAGGGAGG 18 V_HOXA7_03_M01394 TRANSFAC - 1931465 1931480 6.0E-06 TGAGTAATTACTGCCT 16 V_HOXA7_03_M01394 TRANSFAC + 1931467 1931482 5.0E-06 GCAGTAATTACTCAGA 16 V_SP1_Q2_01_M00933 TRANSFAC + 1928725 1928734 4.0E-06 CCCCGCCCCC 10 V_GATA6_04_M02757 TRANSFAC + 1930936 1930952 9.0E-06 TTTAAAGATAAAAAAAG 17 V_IPF1_03_M01235 TRANSFAC + 1931468 1931477 7.0E-06 CAGTAATTAC 10 V_MIF1_01_M00279 TRANSFAC - 1923261 1923278 6.0E-06 GAGTTGCTAAGTAAAGCC 18 V_RFX1_02_M00281 TRANSFAC - 1927064 1927081 5.0E-06 CTGTTTCCATGGCAACAG 18 V_ZIC1_05_M02939 TRANSFAC - 1927020 1927034 1.0E-06 CCTCACAGCAGGATG 15 V_GATA1_06_M00347 TRANSFAC + 1930939 1930948 1.0E-05 AAAGATAAAA 10 V_HOXC8_01_M01321 TRANSFAC - 1931467 1931482 4.0E-06 TCTGAGTAATTACTGC 16

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