Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ZNF597 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 146434 zinc finger protein 597 chr16 - 3492990 - 3498490 3493490 Transcription Factor Binding Sites   Download all TFBS in the ZNF597 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints GABPA_MA0062.2 JASPAR + 3493506 3493516 9.0E-06 CCGGAAGCGAC 11 ESRRA_nuclearreceptor_DBD_dimeric_19_1 SELEX + 3493890 3493908 7.0E-06 CAAGGTGATTGAGAGGGCG 19 FOXA1_MA0148.1 JASPAR - 3492859 3492869 9.0E-06 TGTTTGTTTTG 11 FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 3492849 3492865 1.0E-05 CCAAACAAAACAAAACA 17 RFX4_RFX_DBD_dimeric_16_1 SELEX + 3495692 3495707 1.0E-06 TGTTGCCATAATTACA 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 3495692 3495707 1.0E-06 TGTAATTATGGCAACA 16 Foxj3_forkhead_DBD_putatively-multimeric_11_1 SELEX - 3493989 3493999 9.0E-06 ACGTACACAAA 11 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX - 3493492 3493503 1.0E-06 GCTTTTCCCGCA 12 SOX8_HMG_full_dimeric_17_1 SELEX - 3494287 3494303 6.0E-06 AATCAGTGGCAGAGCTT 17 EWSR1-FLI1_MA0149.1 JASPAR - 3493273 3493290 6.0E-06 GGAGGGAATCGAGGGAGG 18 GLI2_C2H2_DBD_monomeric_14_1 SELEX - 3492958 3492971 1.0E-06 GACCACACACATAA 14 NFYA_MA0060.1 JASPAR - 3493545 3493560 5.0E-06 TTCGACCAATCAAAGG 16 NFYA_MA0060.1 JASPAR - 3494295 3494310 1.0E-06 ACCAACCAATCAGTGG 16 GATA5_GATA_DBD_monomeric_8_1 SELEX + 3492869 3492876 7.0E-06 AGATAAGA 8 GATA4_GATA_DBD_monomeric_8_1 SELEX + 3492869 3492876 7.0E-06 AGATAAGA 8 Pax4_MA0068.1 JASPAR - 3495261 3495290 4.0E-06 AAAAAAAAAAAAAAGAGATAAGCACAAACC 30 ETV2_ETS_DBD_monomeric_11_1 SELEX - 3493675 3493685 7.0E-06 AAGCGGAAATG 11 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 3495692 3495707 2.0E-06 TGTTGCCATAATTACA 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 3495692 3495707 1.0E-06 TGTAATTATGGCAACA 16 ESRRG_nuclearreceptor_full_dimeric_18_1 SELEX + 3493891 3493908 5.0E-06 AAGGTGATTGAGAGGGCG 18 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 3492859 3492869 1.0E-05 CAAAACAAACA 11 EGR2_C2H2_full_monomeric_15_1 SELEX + 3493456 3493470 8.0E-06 AAACTCCCACGCTCT 15 FOXI1_MA0042.1 JASPAR - 3492861 3492872 7.0E-06 ATCTGTTTGTTT 12 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 3492859 3492869 6.0E-06 CAAAACAAACA 11 PBX1_MA0070.1 JASPAR - 3493547 3493558 9.0E-06 CGACCAATCAAA 12 Gata1_MA0035.2 JASPAR + 3492867 3492877 1.0E-06 ACAGATAAGAC 11 Gata1_MA0035.2 JASPAR - 3495267 3495277 3.0E-06 AGAGATAAGCA 11 GATA3_GATA_full_monomeric_8_1 SELEX + 3492869 3492876 7.0E-06 AGATAAGA 8 RFX2_RFX_DBD_dimeric_16_1 SELEX + 3495692 3495707 1.0E-06 TGTTGCCATAATTACA 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 3495692 3495707 1.0E-06 TGTAATTATGGCAACA 16 RFX5_RFX_DBD_dimeric_16_3 SELEX + 3495692 3495707 7.0E-06 TGTTGCCATAATTACA 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 3495692 3495707 6.0E-06 TGTAATTATGGCAACA 16 SOX18_HMG_full_dimeric_15_3 SELEX - 3495577 3495591 4.0E-06 AAGAATAGCATTAAA 15 Mafb_bZIP_DBD_dimeric_18_1 SELEX - 3495585 3495602 2.0E-06 AGTGCTGATGTAAGAATA 18 FOXO6_forkhead_DBD_putatively-multimeric_14_1 SELEX - 3493156 3493169 8.0E-06 ATTCCCCACCCGCC 14 ETV6_ETS_full_dimeric_15_1 SELEX - 3493675 3493689 0.0E+00 GCGGAAGCGGAAATG 15 ELF5_MA0136.1 JASPAR - 3492940 3492948 9.0E-06 AACTTCCTT 9 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 3492857 3492869 2.0E-06 AACAAAACAAACA 13 NHLH1_bHLH_full_dimeric_10_1 SELEX - 3493633 3493642 9.0E-06 CGCAGCTGCC 10 RREB1_MA0073.1 JASPAR + 3492851 3492870 2.0E-06 AAACAAAACAAAACAAACAG 20 V_NFAT_Q4_01_M00935 TRANSFAC + 3494265 3494274 1.0E-06 TTGGAAAATT 10 V_FOXP1_01_M00987 TRANSFAC - 3492851 3492870 0.0E+00 CTGTTTGTTTTGTTTTGTTT 20 V_FOXP1_01_M00987 TRANSFAC - 3492853 3492872 5.0E-06 ATCTGTTTGTTTTGTTTTGT 20 V_FOXP1_01_M00987 TRANSFAC - 3492855 3492874 5.0E-06 TTATCTGTTTGTTTTGTTTT 20 V_FOXP1_01_M00987 TRANSFAC + 3492958 3492977 9.0E-06 TTATGTGTGTGGTCTTGGAA 20 V_FOXP1_01_M00987 TRANSFAC + 3495270 3495289 0.0E+00 TTATCTCTTTTTTTTTTTTT 20 V_CDP_03_M01342 TRANSFAC + 3493595 3493611 9.0E-06 ACCAATTGAACACCTTA 17 V_CEBPG_Q6_M00622 TRANSFAC - 3495586 3495598 2.0E-06 CTGATGTAAGAAT 13 V_HNF3B_01_M00131 TRANSFAC - 3492860 3492874 3.0E-06 TTATCTGTTTGTTTT 15 V_SPI1_01_M01203 TRANSFAC + 3492935 3492951 1.0E-05 GAAAGAAGGAAGTTGGT 17 V_TCF3_01_M01594 TRANSFAC - 3492852 3492864 1.0E-06 GTTTTGTTTTGTT 13 V_GATA2_02_M00348 TRANSFAC + 3492867 3492876 2.0E-06 ACAGATAAGA 10 V_NF1_Q6_01_M00806 TRANSFAC - 3494313 3494329 6.0E-06 TTGTAAACTGGCCAAGA 17 V_NFY_Q6_M00185 TRANSFAC - 3494298 3494308 6.0E-06 CAACCAATCAG 11 V_PAX4_03_M00378 TRANSFAC - 3493158 3493169 7.0E-06 ATTCCCCACCCG 12 V_DLX3_01_M01400 TRANSFAC + 3495694 3495710 4.0E-06 TTGCCATAATTACAAAG 17 V_BCL6_01_M01183 TRANSFAC - 3492688 3492703 1.0E-06 CTTTTAAAAGTTCTTT 16 V_TCF4_Q5_01_M02033 TRANSFAC - 3493543 3493552 4.0E-06 ATCAAAGGGC 10 V_MEF2_02_M00231 TRANSFAC - 3495579 3495600 6.0E-06 TGCTGATGTAAGAATAGCATTA 22 V_SRY_02_M00160 TRANSFAC + 3492854 3492865 8.0E-06 CAAAACAAAACA 12 V_NFAT3_Q3_M01734 TRANSFAC + 3493648 3493657 1.0E-05 TAGTTTTCCT 10 V_HNF3_Q6_01_M01012 TRANSFAC - 3492857 3492874 0.0E+00 TTATCTGTTTGTTTTGTT 18 V_MAF_Q6_M00648 TRANSFAC + 3492937 3492952 3.0E-06 AAGAAGGAAGTTGGTA 16 V_CUX1_03_M02958 TRANSFAC + 3493595 3493611 9.0E-06 ACCAATTGAACACCTTA 17 V_GATA_C_M00203 TRANSFAC + 3492869 3492879 1.0E-06 AGATAAGACAT 11 V_PPAR_DR1_Q2_M00763 TRANSFAC - 3492989 3493001 6.0E-06 AGCCCTTTGACCA 13 V_PU1_Q4_M01172 TRANSFAC - 3492936 3492954 4.0E-06 TTTACCAACTTCCTTCTTT 19 V_NFY_Q6_01_M00775 TRANSFAC - 3493549 3493561 3.0E-06 CTTCGACCAATCA 13 V_NFY_Q6_01_M00775 TRANSFAC - 3494299 3494311 4.0E-06 TACCAACCAATCA 13 V_CDX_Q5_M00991 TRANSFAC + 3492684 3492701 7.0E-06 AAAAAAAGAACTTTTAAA 18 V_BCL6_02_M01185 TRANSFAC + 3494333 3494346 4.0E-06 TGCTTTCCTCAGCT 14 V_NFY_C_M00209 TRANSFAC + 3493547 3493560 3.0E-06 TTTGATTGGTCGAA 14 V_NFY_C_M00209 TRANSFAC + 3494297 3494310 0.0E+00 ACTGATTGGTTGGT 14 V_HELIOSA_02_M01004 TRANSFAC + 3494263 3494273 7.0E-06 AATTGGAAAAT 11 V_PR_Q2_M00960 TRANSFAC + 3493216 3493225 7.0E-06 GAGAGAACAG 10 V_HNF3G_Q4_M02015 TRANSFAC - 3492862 3492869 7.0E-06 TGTTTGTT 8 V_NFAT_Q6_M00302 TRANSFAC + 3494263 3494274 0.0E+00 AATTGGAAAATT 12 V_ZBP89_Q4_M01816 TRANSFAC - 3494227 3494236 2.0E-06 TCCTCCCCCA 10 V_TBX5_02_M01020 TRANSFAC - 3493602 3493611 3.0E-06 TAAGGTGTTC 10 V_HNF3_Q6_M00791 TRANSFAC + 3492859 3492871 0.0E+00 CAAAACAAACAGA 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 3492859 3492869 1.0E-06 TGTTTGTTTTG 11 V_PAX5_01_M00143 TRANSFAC - 3493689 3493716 8.0E-06 CCGGAGCTCACGGAGGAGACCCCGCCAG 28 V_ZBTB7B_03_M02826 TRANSFAC + 3493292 3493306 4.0E-06 AACCCCCCCTTAAAA 15 V_PBX1_01_M00096 TRANSFAC - 3493548 3493556 1.0E-05 ACCAATCAA 9 V_REST_01_M01256 TRANSFAC + 3493928 3493949 9.0E-06 GGCTTGAGCTGTCCTTTGTGTC 22 V_GRE_C_M00205 TRANSFAC - 3492980 3492995 1.0E-06 TTGACCAAGTGTTCTT 16 V_GATA1_09_M02254 TRANSFAC + 3492867 3492877 1.0E-06 ACAGATAAGAC 11 V_GATA1_09_M02254 TRANSFAC - 3495267 3495277 3.0E-06 AGAGATAAGCA 11 V_RFX_Q6_M00975 TRANSFAC + 3495691 3495699 4.0E-06 CTGTTGCCA 9 V_SRF_Q5_02_M01007 TRANSFAC + 3495621 3495639 4.0E-06 ATTCTCCTTATCTGGATTT 19 V_AP1_Q2_01_M00924 TRANSFAC + 3494040 3494051 1.0E-06 TGACTCAAAGTG 12 V_FOXO1_Q5_M01216 TRANSFAC + 3492854 3492862 8.0E-06 CAAAACAAA 9 V_FOXO1_Q5_M01216 TRANSFAC + 3492859 3492867 8.0E-06 CAAAACAAA 9 V_IRF7_01_M00453 TRANSFAC + 3494259 3494276 0.0E+00 TTGGAATTGGAAAATTGA 18 V_GLI3_01_M01596 TRANSFAC + 3492962 3492972 3.0E-06 GTGTGTGGTCT 11 V_ELF1_Q6_M00746 TRANSFAC - 3493651 3493662 8.0E-06 AAAGGAGGAAAA 12 V_ELF1_Q6_M00746 TRANSFAC - 3494211 3494222 5.0E-06 ACAATAGGAAAT 12 V_HBP1_04_M02866 TRANSFAC + 3494211 3494227 2.0E-06 ATTTCCTATTGTGTGCT 17 V_DLX7_01_M01486 TRANSFAC + 3495694 3495710 6.0E-06 TTGCCATAATTACAAAG 17 V_CAAT_01_M00254 TRANSFAC - 3494299 3494310 3.0E-06 ACCAACCAATCA 12 V_GATA1_05_M00346 TRANSFAC + 3492867 3492876 1.0E-05 ACAGATAAGA 10 V_ALPHACP1_01_M00687 TRANSFAC - 3494298 3494308 3.0E-06 CAACCAATCAG 11 V_NFYC_Q5_M02107 TRANSFAC - 3494295 3494308 8.0E-06 CAACCAATCAGTGG 14 V_FAC1_01_M00456 TRANSFAC + 3492851 3492864 9.0E-06 AAACAAAACAAAAC 14 V_FAC1_01_M00456 TRANSFAC + 3492856 3492869 0.0E+00 AAACAAAACAAACA 14 V_TAL1_01_M01591 TRANSFAC + 3493655 3493667 1.0E-06 CCTCCTTTTCTCT 13 V_TAL1_01_M01591 TRANSFAC + 3495265 3495277 8.0E-06 TGTGCTTATCTCT 13 V_GATA1_04_M00128 TRANSFAC + 3492866 3492878 6.0E-06 AACAGATAAGACA 13 V_GATA1_04_M00128 TRANSFAC - 3495624 3495636 3.0E-06 TCCAGATAAGGAG 13 V_ZBTB3_03_M02825 TRANSFAC + 3492790 3492806 5.0E-06 ATCAGCACTGCACTCCA 17 V_FOXL1_02_M02857 TRANSFAC + 3492845 3492860 1.0E-06 ATCTCCAAACAAAACA 16 V_FOXL1_02_M02857 TRANSFAC + 3492850 3492865 0.0E+00 CAAACAAAACAAAACA 16 V_FOXL1_02_M02857 TRANSFAC + 3492855 3492870 1.0E-06 AAAACAAAACAAACAG 16 V_SIRT6_01_M01797 TRANSFAC + 3492869 3492876 7.0E-06 AGATAAGA 8 V_FOXJ3_06_M02855 TRANSFAC + 3492849 3492865 2.0E-06 CCAAACAAAACAAAACA 17 V_FOXJ3_06_M02855 TRANSFAC + 3492854 3492870 5.0E-06 CAAAACAAAACAAACAG 17 V_ZSCAN4_04_M02942 TRANSFAC - 3494215 3494230 5.0E-06 CCCAGCACACAATAGG 16 V_GATA3_02_M00350 TRANSFAC + 3492867 3492876 8.0E-06 ACAGATAAGA 10 V_NCX_01_M00484 TRANSFAC - 3493352 3493361 4.0E-06 CGGTAAGTGG 10 V_GATA3_01_M00077 TRANSFAC - 3492841 3492849 4.0E-06 GAGATAGGG 9 V_NFY_01_M00287 TRANSFAC - 3493545 3493560 5.0E-06 TTCGACCAATCAAAGG 16 V_NFY_01_M00287 TRANSFAC - 3494295 3494310 1.0E-06 ACCAACCAATCAGTGG 16 V_FPM315_01_M01587 TRANSFAC + 3494228 3494239 1.0E-06 GGGGGAGGAGGG 12 V_NRSF_01_M00256 TRANSFAC + 3492823 3492843 8.0E-06 TCCAGCGACAAGGCCAGACCC 21 V_FOXO3_01_M00477 TRANSFAC - 3492856 3492869 9.0E-06 TGTTTGTTTTGTTT 14 V_LMO2COM_02_M00278 TRANSFAC - 3495626 3495634 3.0E-06 CAGATAAGG 9 V_SMAD_Q6_01_M00974 TRANSFAC + 3492704 3492714 1.0E-06 TAGCCAGACAC 11 V_ZFP281_01_M01597 TRANSFAC + 3494227 3494237 9.0E-06 TGGGGGAGGAG 11 V_SRF_Q5_01_M00922 TRANSFAC - 3495621 3495635 9.0E-06 CCAGATAAGGAGAAT 15 V_SREBP_Q3_M00776 TRANSFAC - 3493744 3493755 8.0E-06 GGGGTCACCCTA 12 V_SRF_02_M01257 TRANSFAC - 3495620 3495637 7.0E-06 ATCCAGATAAGGAGAATC 18 V_GATA2_03_M00349 TRANSFAC + 3492867 3492876 1.0E-06 ACAGATAAGA 10 V_HFH3_01_M00289 TRANSFAC - 3492860 3492872 6.0E-06 ATCTGTTTGTTTT 13 V_EWSR1FLI1_01_M02252 TRANSFAC - 3493273 3493290 6.0E-06 GGAGGGAATCGAGGGAGG 18 V_FOXJ2_01_M00422 TRANSFAC + 3492857 3492874 0.0E+00 AACAAAACAAACAGATAA 18 V_GATA5_03_M02756 TRANSFAC + 3492864 3492880 1.0E-06 CAAACAGATAAGACATT 17 V_GATA5_03_M02756 TRANSFAC - 3495264 3495280 7.0E-06 AAAAGAGATAAGCACAA 17 V_GATA5_03_M02756 TRANSFAC - 3495622 3495638 1.0E-06 AATCCAGATAAGGAGAA 17 V_ELF5_04_M02241 TRANSFAC - 3492940 3492948 9.0E-06 AACTTCCTT 9 V_CMAF_01_M01070 TRANSFAC - 3495587 3495605 9.0E-06 GACAGTGCTGATGTAAGAA 19 V_GATA6_04_M02757 TRANSFAC - 3495264 3495280 1.0E-06 AAAAGAGATAAGCACAA 17 V_GATA6_04_M02757 TRANSFAC - 3495622 3495638 6.0E-06 AATCCAGATAAGGAGAA 17 V_NFYA_Q5_M02106 TRANSFAC - 3493545 3493558 4.0E-06 CGACCAATCAAAGG 14 V_NFYA_Q5_M02106 TRANSFAC - 3494295 3494308 3.0E-06 CAACCAATCAGTGG 14 V_ZID_01_M00085 TRANSFAC + 3495641 3495653 9.0E-06 TGGCTCTTTCACC 13 V_CEBPG_Q6_01_M01869 TRANSFAC + 3494263 3494274 9.0E-06 AATTGGAAAATT 12 V_ARID5A_04_M02840 TRANSFAC - 3494060 3494076 2.0E-06 GGTACAATACGTAATGC 17 V_ARID5A_04_M02840 TRANSFAC - 3494209 3494225 1.0E-06 CACACAATAGGAAATGA 17 V_FOXK1_03_M02752 TRANSFAC - 3493986 3494002 9.0E-06 TGAACGTACACAAAGAT 17 V_PAX4_04_M00380 TRANSFAC + 3492686 3492715 3.0E-06 AAAAAGAACTTTTAAAAGTAGCCAGACACT 30 V_PAX4_04_M00380 TRANSFAC - 3495261 3495290 1.0E-06 AAAAAAAAAAAAAAGAGATAAGCACAAACC 30 V_SMAD1_01_M01590 TRANSFAC + 3492854 3492865 6.0E-06 CAAAACAAAACA 12 V_SMAD1_01_M01590 TRANSFAC - 3493583 3493594 5.0E-06 CAACACAAAAGA 12 V_SOX9_Q4_M01284 TRANSFAC - 3493543 3493553 6.0E-06 AATCAAAGGGC 11 V_RFX1_02_M00281 TRANSFAC - 3495691 3495708 1.0E-06 TTGTAATTATGGCAACAG 18 V_PPARA_01_M00242 TRANSFAC + 3492982 3493001 7.0E-06 GAACACTTGGTCAAAGGGCT 20 V_NANOG_02_M01247 TRANSFAC + 3492850 3492869 0.0E+00 CAAACAAAACAAAACAAACA 20 V_GATA1_06_M00347 TRANSFAC + 3492867 3492876 2.0E-06 ACAGATAAGA 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.