Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

NRG4 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 145957 neuregulin 4 chr15 - 76304285 - 76309785 76304785 Transcription Factor Binding Sites   Download all TFBS in the NRG4 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXI1_MA0042.1 JASPAR - 76304626 76304637 5.0E-06 TCCTGTTTGTTT 12 MSC_bHLH_full_dimeric_10_1 SELEX - 76304481 76304490 9.0E-06 AAGAGCTGTT 10 TP63_p53l_DBD_dimeric_18_1 SELEX + 76304740 76304757 5.0E-06 TGCATTTTATAACATGTC 18 TP63_p53l_DBD_dimeric_18_1 SELEX - 76304740 76304757 3.0E-06 GACATGTTATAAAATGCA 18 Irx3_homeodomain_DBD_dimeric_12_1 SELEX + 76304749 76304760 2.0E-06 TAACATGTCAAA 12 V_MEQ_01_M02049 TRANSFAC + 76304538 76304546 7.0E-06 AACACACAC 9 V_AP1_Q2_M00173 TRANSFAC + 76304600 76304610 5.0E-06 ACTGACTCATA 11 V_MEIS1_02_M01419 TRANSFAC + 76304747 76304762 8.0E-06 TATAACATGTCAAAAA 16 V_DBX1_01_M01483 TRANSFAC + 76304581 76304597 2.0E-06 TATTTGATTTTTAAAAA 17 V_IRF_Q6_01_M00972 TRANSFAC - 76304613 76304623 5.0E-06 AAAAAAGAAAC 11 V_CEBP_01_M00159 TRANSFAC - 76304618 76304630 5.0E-06 TGTTTGGAAAAAA 13 V_AREB6_04_M00415 TRANSFAC + 76304611 76304619 8.0E-06 CTGTTTCTT 9 V_GM497_04_M02864 TRANSFAC + 76304535 76304550 6.0E-06 AGAAACACACACGAGC 16 V_MEIS2_01_M01488 TRANSFAC + 76304747 76304762 9.0E-06 TATAACATGTCAAAAA 16 V_IPF1_Q4_M00436 TRANSFAC - 76304569 76304580 6.0E-06 GATTTAATGTTC 12 V_POLY_C_M00212 TRANSFAC + 76304572 76304589 8.0E-06 CATTAAATCTATTTGATT 18 V_IRX4_01_M01410 TRANSFAC - 76304745 76304761 4.0E-06 TTTTGACATGTTATAAA 17 V_IRX4_01_M01410 TRANSFAC + 76304746 76304762 2.0E-06 TTATAACATGTCAAAAA 17 V_HOXB9_01_M01426 TRANSFAC - 76304765 76304780 6.0E-06 GCAGCCATATAAATCA 16 V_HNF3_Q6_M00791 TRANSFAC + 76304624 76304636 9.0E-06 CCAAACAAACAGG 13 V_IRF_Q6_M00772 TRANSFAC + 76304609 76304623 1.0E-06 TACTGTTTCTTTTTT 15 V_ISRE_01_M00258 TRANSFAC + 76304611 76304625 6.0E-06 CTGTTTCTTTTTTCC 15 V_AP1_C_M00199 TRANSFAC - 76304601 76304609 3.0E-06 ATGAGTCAG 9 V_OCAB_Q6_M02113 TRANSFAC - 76304736 76304746 6.0E-06 AAATGCAAGTC 11 V_AP1_01_M00517 TRANSFAC - 76304599 76304611 7.0E-06 GTATGAGTCAGTG 13 V_TBP_06_M02814 TRANSFAC - 76304584 76304599 9.0E-06 GCTTTTTAAAAATCAA 16 V_IRX3_01_M01318 TRANSFAC - 76304745 76304761 6.0E-06 TTTTGACATGTTATAAA 17 V_AP1_Q2_01_M00924 TRANSFAC + 76304602 76304613 3.0E-06 TGACTCATACTG 12 V_IRX5_01_M01472 TRANSFAC - 76304745 76304761 3.0E-06 TTTTGACATGTTATAAA 17 V_IRX5_01_M01472 TRANSFAC + 76304746 76304762 2.0E-06 TTATAACATGTCAAAAA 17 V_IRX3_02_M01485 TRANSFAC - 76304745 76304761 6.0E-06 TTTTGACATGTTATAAA 17 V_IRX3_02_M01485 TRANSFAC + 76304746 76304762 8.0E-06 TTATAACATGTCAAAAA 17 V_MRG2_01_M01395 TRANSFAC + 76304747 76304762 3.0E-06 TATAACATGTCAAAAA 16 V_IPF1_05_M01255 TRANSFAC + 76304569 76304580 5.0E-06 GAACATTAAATC 12 V_HDX_01_M01333 TRANSFAC - 76304580 76304596 5.0E-06 TTTTAAAAATCAAATAG 17 V_IRX2_01_M01405 TRANSFAC + 76304746 76304762 9.0E-06 TTATAACATGTCAAAAA 17 V_IRF1_Q6_01_M01881 TRANSFAC + 76304611 76304624 8.0E-06 CTGTTTCTTTTTTC 14 V_HFH3_01_M00289 TRANSFAC - 76304625 76304637 9.0E-06 TCCTGTTTGTTTG 13 V_NFE2_01_M00037 TRANSFAC + 76304599 76304609 8.0E-06 CACTGACTCAT 11 V_HOXD10_01_M01375 TRANSFAC - 76304739 76304755 8.0E-06 CATGTTATAAAATGCAA 17 V_IRXB3_01_M01377 TRANSFAC + 76304746 76304762 9.0E-06 TTATAACATGTCAAAAA 17

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.