Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

GLT1D1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 144423 glycosyltransferase 1 domain containing 1 chr12 + 129333080 - 129338580 129338080 Transcription Factor Binding Sites   Download all TFBS in the GLT1D1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXJ2_forkhead_DBD_dimeric_13_1 SELEX - 129338742 129338754 9.0E-06 GTAAACAAATAAG 13 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX - 129341952 129341964 6.0E-06 ATAAACATCAAAG 13 PITX3_homeodomain_DBD_monomeric_9_1 SELEX + 129338819 129338827 8.0E-06 GTTAATCCC 9 MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 129341280 129341297 2.0E-06 GTGCTTAAGAAGTAATTA 18 ESRRA_nuclearreceptor_DBD_dimeric_19_1 SELEX + 129334578 129334596 9.0E-06 TGAGGACAACCAGAGGTCA 19 NFIA_NFI_full_dimeric_15_1 SELEX + 129337048 129337062 2.0E-06 ATGGCATTTTGCCAG 15 NFIA_NFI_full_dimeric_15_1 SELEX - 129337048 129337062 8.0E-06 CTGGCAAAATGCCAT 15 SPIC_ETS_full_monomeric_14_1 SELEX + 129341820 129341833 6.0E-06 ACAAAGGGGAAGGA 14 BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 129341281 129341297 3.0E-06 TGCTTAAGAAGTAATTA 17 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 129338746 129338757 3.0E-06 CAAGTAAACAAA 12 SRF_MADS_DBD_dimeric_12_1 SELEX + 129334505 129334516 6.0E-06 ACCATATAGGGT 12 SRF_MADS_DBD_dimeric_12_1 SELEX - 129334505 129334516 6.0E-06 ACCCTATATGGT 12 RFX4_RFX_DBD_dimeric_16_1 SELEX - 129334527 129334542 5.0E-06 GAATGCCATGGCAACG 16 FOXL1_forkhead_full_dimeric_13_1 SELEX - 129338743 129338755 0.0E+00 AGTAAACAAATAA 13 FOXC1_forkhead_DBD_monomeric_11_1 SELEX - 129341957 129341967 8.0E-06 TGAATAAACAT 11 ZNF232_C2H2_full_monomeric_19_1 SELEX - 129337036 129337054 2.0E-06 ATGCCATCTGTGGATTTAA 19 NFIX_NFI_full_dimeric_15_2 SELEX + 129337048 129337062 1.0E-06 ATGGCATTTTGCCAG 15 NFIX_NFI_full_dimeric_15_2 SELEX - 129337048 129337062 0.0E+00 CTGGCAAAATGCCAT 15 FOXO1_forkhead_DBD_monomeric_8_1 SELEX - 129338747 129338754 7.0E-06 GTAAACAA 8 Sox1_HMG_DBD_dimeric_13_1 SELEX + 129334594 129334606 1.0E-06 TCACTTTCATTGC 13 PITX1_homeodomain_full_monomeric_8_1 SELEX + 129338820 129338827 1.0E-05 TTAATCCC 8 TCF7L1_HMG_full_monomeric_12_1 SELEX - 129341951 129341962 1.0E-06 AAACATCAAAGC 12 RARG_nuclearreceptor_full_dimeric_18_1 SELEX + 129334579 129334596 0.0E+00 GAGGACAACCAGAGGTCA 18 RARG_nuclearreceptor_full_dimeric_18_1 SELEX + 129340746 129340763 3.0E-06 GAGGACAGCCAGAGGTCG 18 LEF1_HMG_DBD_monomeric_15_1 SELEX - 129341948 129341962 2.0E-06 AAACATCAAAGCCTG 15 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 129334527 129334542 4.0E-06 CGTTGCCATGGCATTC 16 ESRRG_nuclearreceptor_full_dimeric_18_1 SELEX + 129334579 129334596 2.0E-06 GAGGACAACCAGAGGTCA 18 Foxq1_MA0040.1 JASPAR + 129341955 129341965 2.0E-06 TGATGTTTATT 11 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 129338744 129338754 0.0E+00 GTAAACAAATA 11 NR2E1_nuclearreceptor_full_dimeric_14_1 SELEX - 129334516 129334529 9.0E-06 ACGTCAGGAAGTTA 14 Rarb_nuclearreceptor_DBD_dimeric_17_1 SELEX + 129334580 129334596 0.0E+00 AGGACAACCAGAGGTCA 17 FOXI1_MA0042.1 JASPAR + 129338741 129338752 1.0E-06 TCTTATTTGTTT 12 SOX14_HMG_DBD_dimeric_13_1 SELEX + 129334594 129334606 5.0E-06 TCACTTTCATTGC 13 RARA_nuclearreceptor_full_dimeric_17_1 SELEX + 129334580 129334596 0.0E+00 AGGACAACCAGAGGTCA 17 ZBTB49_C2H2_DBD_monomeric_17_1 SELEX - 129341430 129341446 2.0E-06 CTCCGCCTTGCAGGTCA 17 Tcf7_HMG_DBD_monomeric_12_1 SELEX - 129341951 129341962 0.0E+00 AAACATCAAAGC 12 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 129338744 129338754 1.0E-06 GTAAACAAATA 11 SOX14_HMG_DBD_dimeric_12_1 SELEX + 129334594 129334605 2.0E-06 TCACTTTCATTG 12 Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 129341280 129341297 1.0E-06 GTGCTTAAGAAGTAATTA 18 RFX5_RFX_DBD_dimeric_16_3 SELEX - 129334527 129334542 3.0E-06 GAATGCCATGGCAACG 16 Foxd3_MA0041.1 JASPAR + 129338745 129338756 6.0E-06 ATTTGTTTACTT 12 RHOXF1_homeodomain_full_monomeric_8_1 SELEX + 129338820 129338827 1.0E-05 TTAATCCC 8 EN1_homeodomain_full_dimeric_14_1 SELEX - 129341284 129341297 1.0E-05 TAATTACTTCTTAA 14 Esrra_nuclearreceptor_DBD_monomeric_11_1 SELEX - 129341065 129341075 8.0E-06 TTCAATGTCAT 11 NFIB_NFI_full_dimeric_15_1 SELEX + 129337048 129337062 2.0E-06 ATGGCATTTTGCCAG 15 NFIB_NFI_full_dimeric_15_1 SELEX - 129337048 129337062 8.0E-06 CTGGCAAAATGCCAT 15 DUXA_homeodomain_DBD_dimeric_13_1 SELEX + 129342143 129342155 1.0E-06 GTGATCTAATCAG 13 SRF_MADS_full_dimeric_16_1 SELEX + 129334503 129334518 4.0E-06 AGACCATATAGGGTAA 16 SRF_MADS_full_dimeric_16_1 SELEX - 129334503 129334518 0.0E+00 TTACCCTATATGGTCT 16 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX - 129341262 129341272 6.0E-06 TTTCCCCACCA 11 RORA_nuclearreceptor_DBD_dimeric_20_1 SELEX + 129334577 129334596 0.0E+00 TTGAGGACAACCAGAGGTCA 20 FOXB1_forkhead_full_monomeric_9_1 SELEX - 129338747 129338755 7.0E-06 AGTAAACAA 9 FOXO3_forkhead_full_monomeric_8_1 SELEX - 129338747 129338754 7.0E-06 GTAAACAA 8 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 129341280 129341297 1.0E-06 GTGCTTAAGAAGTAATTA 18 Sox1_HMG_DBD_dimeric_15_1 SELEX + 129334593 129334607 1.0E-05 GTCACTTTCATTGCC 15 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 129338744 129338756 0.0E+00 AAGTAAACAAATA 13 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 129338741 129338754 4.0E-06 GTAAACAAATAAGA 14 V_MEIS1BHOXA9_02_M00421 TRANSFAC - 129334540 129334553 4.0E-06 TGACAGTTTAGGAA 14 V_HNF3B_01_M00131 TRANSFAC + 129338739 129338753 0.0E+00 TGTCTTATTTGTTTA 15 V_HNF3B_01_M00131 TRANSFAC + 129338743 129338757 1.0E-05 TTATTTGTTTACTTG 15 V_HNF3B_01_M00131 TRANSFAC + 129341953 129341967 3.0E-06 TTTGATGTTTATTCA 15 V_SPI1_01_M01203 TRANSFAC - 129337070 129337086 7.0E-06 GAAATAGGGAACTGAAG 17 V_SPI1_01_M01203 TRANSFAC + 129341820 129341836 7.0E-06 ACAAAGGGGAAGGAGGC 17 V_FREAC7_01_M00293 TRANSFAC - 129341954 129341969 4.0E-06 TCTGAATAAACATCAA 16 V_GEN_INI_B_M00315 TRANSFAC + 129340927 129340934 1.0E-05 CCTCATTT 8 V_TCF3_01_M01594 TRANSFAC + 129341951 129341963 4.0E-06 GCTTTGATGTTTA 13 V_LEF1_04_M02774 TRANSFAC + 129341947 129341963 5.0E-06 TCAGGCTTTGATGTTTA 17 V_YY1_02_M00069 TRANSFAC - 129341452 129341471 0.0E+00 GTGGCGCCATCTTGGCTCAT 20 V_FOXA2_04_M02749 TRANSFAC - 129338743 129338759 0.0E+00 AACAAGTAAACAAATAA 17 V_EVI1_04_M00081 TRANSFAC + 129340981 129340995 2.0E-06 TGACAAAACTAGATA 15 V_FOXD3_01_M00130 TRANSFAC + 129338745 129338756 5.0E-06 ATTTGTTTACTT 12 V_FOXO4_02_M00476 TRANSFAC + 129338744 129338757 2.0E-06 TATTTGTTTACTTG 14 V_SRY_02_M00160 TRANSFAC - 129338743 129338754 7.0E-06 GTAAACAAATAA 12 V_CEBP_01_M00159 TRANSFAC + 129338744 129338756 9.0E-06 TATTTGTTTACTT 13 V_FOXO3A_Q1_M01137 TRANSFAC - 129338744 129338755 1.0E-06 AGTAAACAAATA 12 V_YY1_Q6_M00793 TRANSFAC + 129340772 129340780 7.0E-06 GCCATCTTG 9 V_YY1_Q6_M00793 TRANSFAC - 129341458 129341466 7.0E-06 GCCATCTTG 9 V_HNF3_Q6_01_M01012 TRANSFAC + 129338739 129338756 2.0E-06 TGTCTTATTTGTTTACTT 18 V_HNF3_Q6_01_M01012 TRANSFAC + 129338743 129338760 1.0E-06 TTATTTGTTTACTTGTTG 18 V_HNF3_Q6_01_M01012 TRANSFAC + 129341953 129341970 9.0E-06 TTTGATGTTTATTCAGAC 18 V_FOXJ1_03_M02750 TRANSFAC - 129338742 129338757 0.0E+00 CAAGTAAACAAATAAG 16 V_HFH4_01_M00742 TRANSFAC + 129338745 129338757 1.0E-05 ATTTGTTTACTTG 13 V_PITX2_Q6_M02114 TRANSFAC + 129341388 129341397 1.0E-06 TGTAATCCCA 10 V_PU1_Q4_M01172 TRANSFAC + 129337067 129337085 3.0E-06 CTCCTTCAGTTCCCTATTT 19 V_CDX_Q5_M00991 TRANSFAC - 129338750 129338767 6.0E-06 CACAGACCAACAAGTAAA 18 V_LDSPOLYA_B_M00317 TRANSFAC - 129341136 129341151 8.0E-06 GACCTGTGTTCTCACC 16 V_WT1_Q6_01_M02036 TRANSFAC - 129338558 129338567 4.0E-06 CGCCCCCGCC 10 V_SRF_C_M00215 TRANSFAC - 129334502 129334516 5.0E-06 ACCCTATATGGTCTA 15 V_MTERF_01_M01245 TRANSFAC + 129340779 129340792 3.0E-06 TGGTTTTGGTCGGT 14 V_GEN_INI3_B_M00314 TRANSFAC + 129340927 129340934 1.0E-05 CCTCATTT 8 V_TCF3_04_M02816 TRANSFAC - 129341947 129341963 2.0E-06 TAAACATCAAAGCCTGA 17 V_FREAC3_01_M00291 TRANSFAC - 129338744 129338759 1.0E-06 AACAAGTAAACAAATA 16 V_CEBPE_Q6_M01868 TRANSFAC - 129342056 129342069 9.0E-06 TAAGCTTTCACAAG 14 V_FOXO1_02_M00474 TRANSFAC + 129338744 129338757 1.0E-06 TATTTGTTTACTTG 14 V_TCFAP2C_03_M02821 TRANSFAC + 129338881 129338895 1.0E-06 ATTCCTTGAGGCGAA 15 V_XFD3_01_M00269 TRANSFAC - 129338744 129338757 8.0E-06 CAAGTAAACAAATA 14 V_XFD3_01_M00269 TRANSFAC - 129341954 129341967 1.0E-05 TGAATAAACATCAA 14 V_SPDEF_03_M02811 TRANSFAC + 129340810 129340825 8.0E-06 CTGCATCCTGTTTTAT 16 V_IK1_01_M00086 TRANSFAC - 129334536 129334548 1.0E-05 GTTTAGGAATGCC 13 V_HNF3A_01_M01261 TRANSFAC - 129338747 129338756 1.0E-06 AAGTAAACAA 10 V_EVI1_01_M00078 TRANSFAC + 129340981 129340996 0.0E+00 TGACAAAACTAGATAA 16 V_AP2BETA_Q3_M01858 TRANSFAC + 129338793 129338808 6.0E-06 GCGGGGGCCCGGGGAG 16 V_HNF3_Q6_M00791 TRANSFAC - 129338746 129338758 6.0E-06 ACAAGTAAACAAA 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 129338744 129338754 1.0E-05 TATTTGTTTAC 11 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 129341958 129341968 9.0E-06 TGTTTATTCAG 11 V_TAL1BETAE47_01_M00065 TRANSFAC - 129340892 129340907 7.0E-06 AATCACAGATGGTTAA 16 V_GR_Q6_M00192 TRANSFAC + 129341268 129341286 1.0E-05 GGAAAACACTTTGTGCTTA 19 V_SOX12_04_M02900 TRANSFAC - 129338732 129338747 8.0E-06 AATAAGACAAAGGCAG 16 V_TCF7_03_M02817 TRANSFAC - 129341947 129341963 6.0E-06 TAAACATCAAAGCCTGA 17 V_XFD2_01_M00268 TRANSFAC - 129338744 129338757 6.0E-06 CAAGTAAACAAATA 14 V_XFD2_01_M00268 TRANSFAC - 129341954 129341967 2.0E-06 TGAATAAACATCAA 14 V_HFH1_01_M00129 TRANSFAC + 129341955 129341966 5.0E-06 TGATGTTTATTC 12 V_BLIMP1_Q6_M01066 TRANSFAC - 129338657 129338672 9.0E-06 GGAGGTGGGAAAGGGA 16 V_EVI1_06_M00011 TRANSFAC - 129340847 129340855 9.0E-06 ACAAGATAC 9 V_GATA4_Q3_M00632 TRANSFAC - 129342138 129342149 3.0E-06 AGATCACAGGGA 12 V_SP4_Q5_M01273 TRANSFAC - 129338802 129338812 7.0E-06 GCCCCTCCCCG 11 V_GCNF_01_M00526 TRANSFAC + 129334587 129334604 1.0E-05 CCAGAGGTCACTTTCATT 18 V_HFH8_01_M00294 TRANSFAC + 129338745 129338757 3.0E-06 ATTTGTTTACTTG 13 V_HFH8_01_M00294 TRANSFAC + 129341955 129341967 5.0E-06 TGATGTTTATTCA 13 V_YY1_03_M02044 TRANSFAC - 129341458 129341469 3.0E-06 GGCGCCATCTTG 12 V_GATA1_05_M00346 TRANSFAC - 129340820 129340829 6.0E-06 GCTGATAAAA 10 V_FOXL1_04_M02753 TRANSFAC - 129338743 129338759 1.0E-06 AACAAGTAAACAAATAA 17 V_PLAG1_01_M01778 TRANSFAC + 129341814 129341829 9.0E-06 GGGGCTACAAAGGGGA 16 V_CPHX_01_M01478 TRANSFAC - 129342142 129342155 8.0E-06 CTGATTAGATCACA 14 V_CPHX_01_M01478 TRANSFAC + 129342143 129342156 2.0E-06 GTGATCTAATCAGC 14 V_GEN_INI2_B_M00313 TRANSFAC + 129340927 129340934 1.0E-05 CCTCATTT 8 V_SRF_01_M00152 TRANSFAC + 129334502 129334519 6.0E-06 TAGACCATATAGGGTAAC 18 V_PITX2_Q2_M00482 TRANSFAC + 129341388 129341398 1.0E-06 TGTAATCCCAG 11 V_R_01_M00273 TRANSFAC + 129338574 129338594 8.0E-06 CAGGCCGGGGACCGCGGTGCC 21 V_LEF1TCF1_Q4_M00978 TRANSFAC + 129341951 129341961 3.0E-06 GCTTTGATGTT 11 V_SRF_02_M01257 TRANSFAC + 129334504 129334521 7.0E-06 GACCATATAGGGTAACTT 18 V_RARA_03_M02787 TRANSFAC + 129334585 129334600 7.0E-06 AACCAGAGGTCACTTT 16 V_LXRA_RXRA_Q3_M00647 TRANSFAC + 129334587 129334601 5.0E-06 CCAGAGGTCACTTTC 15 V_TCFAP2A_03_M02819 TRANSFAC + 129338881 129338895 1.0E-06 ATTCCTTGAGGCGAA 15 V_HFH3_01_M00289 TRANSFAC + 129338741 129338753 0.0E+00 TCTTATTTGTTTA 13 V_HFH3_01_M00289 TRANSFAC + 129341955 129341967 9.0E-06 TGATGTTTATTCA 13 V_FOXJ2_01_M00422 TRANSFAC - 129338739 129338756 2.0E-06 AAGTAAACAAATAAGACA 18 V_FOXJ2_01_M00422 TRANSFAC - 129338743 129338760 0.0E+00 CAACAAGTAAACAAATAA 18 V_FOXJ2_01_M00422 TRANSFAC - 129341953 129341970 5.0E-06 GTCTGAATAAACATCAAA 18 V_FOXO1_01_M00473 TRANSFAC - 129338746 129338755 3.0E-06 AGTAAACAAA 10 V_HNF3B_Q6_M02014 TRANSFAC + 129338747 129338755 2.0E-06 TTGTTTACT 9 V_CTF1_01_M01196 TRANSFAC - 129337048 129337061 2.0E-06 TGGCAAAATGCCAT 14 V_CTF1_01_M01196 TRANSFAC + 129337049 129337062 5.0E-06 TGGCATTTTGCCAG 14 V_GATA5_03_M02756 TRANSFAC - 129335126 129335142 5.0E-06 GGAATTGATAAGGAGTA 17 V_GATA5_03_M02756 TRANSFAC + 129335139 129335155 9.0E-06 TTCCTTGATAAGGTGAT 17 V_FOXO4_01_M00472 TRANSFAC - 129338744 129338754 5.0E-06 GTAAACAAATA 11 V_SOX5_07_M02909 TRANSFAC - 129335129 129335145 1.0E-05 CAAGGAATTGATAAGGA 17 TLX1_NFIC_MA0119.1 JASPAR - 129337048 129337061 2.0E-06 TGGCAAAATGCCAT 14 TLX1_NFIC_MA0119.1 JASPAR + 129337049 129337062 5.0E-06 TGGCATTTTGCCAG 14 V_FOXK1_03_M02752 TRANSFAC - 129338743 129338759 1.0E-06 AACAAGTAAACAAATAA 17 V_RFX1_02_M00281 TRANSFAC - 129334526 129334543 5.0E-06 GGAATGCCATGGCAACGT 18 V_NANOG_02_M01247 TRANSFAC - 129338730 129338749 8.0E-06 CAAATAAGACAAAGGCAGAA 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.