Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

CSHL1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
1444 chorionic somatomammotropin hormone-like 1 chr17 -61988118 - 61993618 61988618

Transcription Factor Binding Sites

 
Download all TFBS in the CSHL1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
CTCF_MA0139.1 JASPAR - 61984954 61984972 7.0E-06 TGAACTGCAGGGGGAGCCA 19
CTCF_MA0139.1 JASPAR + 61989167 61989185 0.0E+00 TGACCACTAGAGGGAACCA 19
FOXF2_MA0030.1 JASPAR + 61984437 61984450 7.0E-06 TCACGATAAACACT 14
LEF1_HMG_DBD_monomeric_15_1 SELEX - 61989190 61989204 2.0E-06 GGAGATCAAAGTGTG 15
Barhl1_homeodomain_DBD_dimeric_16_1 SELEX - 61984440 61984455 8.0E-06 TAAAAAGTGTTTATCG 16
CUX1_CUT_DBD_dimeric_18_1 SELEX - 61993418 61993435 6.0E-06 AACAATCCCCCCATCAAT 18
CTCF_C2H2_full_monomeric_17_1 SELEX - 61989168 61989184 9.0E-06 GGTTCCCTCTAGTGGTC 17
Tcf7_HMG_DBD_monomeric_12_1 SELEX - 61989193 61989204 4.0E-06 GGAGATCAAAGT 12
RREB1_MA0073.1 JASPAR - 61989233 61989252 1.0E-05 CCCCACCCAACCCCCTCCCT 20
RREB1_MA0073.1 JASPAR - 61989234 61989253 0.0E+00 CCCCCACCCAACCCCCTCCC 20
V_SP1_Q6_01_M00931 TRANSFAC + 61989221 61989230 4.0E-06 GGGGCGGGGC 10
V_IRF_Q6_01_M00972 TRANSFAC - 61993299 61993309 4.0E-06 GGAAGTGAAAC 11
V_MAZ_Q6_01_M02023 TRANSFAC + 61989228 61989241 2.0E-06 GGCGGAGGGAGGGG 14
V_IRF_Q6_M00772 TRANSFAC + 61993295 61993309 4.0E-06 TCGTGTTTCACTTCC 15
V_ZBTB7B_03_M02826 TRANSFAC - 61993418 61993432 8.0E-06 AATCCCCCCATCAAT 15
V_ERR1_Q3_M01841 TRANSFAC - 61989256 61989270 7.0E-06 CAGTGACCTGGGGGA 15
V_RREB1_01_M00257 TRANSFAC - 61989239 61989252 2.0E-06 CCCCACCCAACCCC 14
V_MAFK_Q3_M02022 TRANSFAC + 61989140 61989150 9.0E-06 TGAGTCAGCTG 11
V_SP3_Q3_M00665 TRANSFAC + 61989215 61989228 1.0E-06 AGCCTTGGGGCGGG 14
V_CTCF_02_M01259 TRANSFAC + 61989164 61989183 0.0E+00 CACTGACCACTAGAGGGAAC 20
V_CTCF_01_M01200 TRANSFAC - 61984954 61984973 1.0E-05 CTGAACTGCAGGGGGAGCCA 20
V_CTCF_01_M01200 TRANSFAC + 61989166 61989185 0.0E+00 CTGACCACTAGAGGGAACCA 20
V_ELF1_Q6_M00746 TRANSFAC - 61993304 61993315 7.0E-06 GATATAGGAAGT 12
V_LEF1_Q2_01_M01022 TRANSFAC - 61989192 61989201 1.0E-06 GATCAAAGTG 10
V_LEF1TCF1_Q4_M00978 TRANSFAC + 61989193 61989203 3.0E-06 ACTTTGATCTC 11
V_FOXJ2_01_M00422 TRANSFAC + 61984436 61984453 5.0E-06 CTCACGATAAACACTTTT 18
V_FOXO4_01_M00472 TRANSFAC + 61984442 61984452 8.0E-06 ATAAACACTTT 11
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL