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APOBEC3D


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
140564 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D chr22 +39412117 - 39417617 39417117

Transcription Factor Binding Sites

 
Download all TFBS in the APOBEC3D promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
ESRRA_nuclearreceptor_DBD_dimeric_19_1 SELEX + 39417412 39417430 7.0E-06 GGAGGTCACTTTAAGGAGG 19
POU2F1_POU_DBD_dimeric_14_1 SELEX + 39416155 39416168 0.0E+00 CATGAATATTCATA 14
POU2F1_POU_DBD_dimeric_14_1 SELEX - 39416155 39416168 0.0E+00 TATGAATATTCATG 14
SOX8_HMG_DBD_dimeric_14_1 SELEX - 39416153 39416166 8.0E-06 TGAATATTCATGTA 14
Pax4_MA0068.1 JASPAR - 39417097 39417126 1.0E-05 AAAAAAAAAAAAAAAGTGACCTCCCAGGGC 30
Pax4_MA0068.1 JASPAR - 39417100 39417129 2.0E-06 AAAAAAAAAAAAAAAAAAGTGACCTCCCAG 30
Pax4_MA0068.1 JASPAR - 39417101 39417130 4.0E-06 AAAAAAAAAAAAAAAAAAAGTGACCTCCCA 30
IRF1_MA0050.1 JASPAR + 39417459 39417470 4.0E-06 GGAAGTGAAACC 12
ELF3_ETS_full_monomeric_13_1 SELEX + 39417454 39417466 3.0E-06 AAGCAGGAAGTGA 13
Pou2f2_POU_DBD_dimeric_14_1 SELEX + 39416155 39416168 0.0E+00 CATGAATATTCATA 14
Pou2f2_POU_DBD_dimeric_14_1 SELEX - 39416155 39416168 0.0E+00 TATGAATATTCATG 14
POU2F3_POU_DBD_dimeric_12_1 SELEX + 39416156 39416167 0.0E+00 ATGAATATTCAT 12
POU2F3_POU_DBD_dimeric_12_1 SELEX - 39416156 39416167 0.0E+00 ATGAATATTCAT 12
POU5F1P1_POU_DBD_monomeric_12_1 SELEX + 39416156 39416167 0.0E+00 ATGAATATTCAT 12
POU5F1P1_POU_DBD_monomeric_12_1 SELEX - 39416156 39416167 0.0E+00 ATGAATATTCAT 12
Pou5f1_MA0142.1 JASPAR + 39413786 39413800 0.0E+00 CATTGTCATGCAGAA 15
ELF3_ETS_DBD_monomeric_12_1 SELEX + 39417454 39417465 9.0E-06 AAGCAGGAAGTG 12
RUNX1_MA0002.2 JASPAR - 39417466 39417476 2.0E-06 TGCTGTGGTTT 11
POU3F3_POU_DBD_dimeric_12_1 SELEX + 39416156 39416167 0.0E+00 ATGAATATTCAT 12
POU3F3_POU_DBD_dimeric_12_1 SELEX - 39416156 39416167 0.0E+00 ATGAATATTCAT 12
Sox2_MA0143.1 JASPAR + 39413785 39413799 0.0E+00 CCATTGTCATGCAGA 15
Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 39417112 39417124 6.0E-06 AAAAAAAAAAAAA 13
Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 39417113 39417125 6.0E-06 AAAAAAAAAAAAA 13
Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 39417114 39417126 6.0E-06 AAAAAAAAAAAAA 13
Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 39417115 39417127 6.0E-06 AAAAAAAAAAAAA 13
Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 39417116 39417128 6.0E-06 AAAAAAAAAAAAA 13
Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 39417117 39417129 6.0E-06 AAAAAAAAAAAAA 13
Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 39417118 39417130 6.0E-06 AAAAAAAAAAAAA 13
Irx3_homeodomain_DBD_dimeric_12_1 SELEX + 39416152 39416163 6.0E-06 CTACATGAATAT 12
V_FOXP1_01_M00987 TRANSFAC + 39417108 39417127 1.0E-06 TCACTTTTTTTTTTTTTTTT 20
V_FOXP1_01_M00987 TRANSFAC + 39417110 39417129 5.0E-06 ACTTTTTTTTTTTTTTTTTT 20
V_FOXP1_01_M00987 TRANSFAC + 39417111 39417130 1.0E-06 CTTTTTTTTTTTTTTTTTTT 20
V_FOXP1_01_M00987 TRANSFAC + 39417112 39417131 1.0E-06 TTTTTTTTTTTTTTTTTTTG 20
V_FOXP1_01_M00987 TRANSFAC + 39417113 39417132 4.0E-06 TTTTTTTTTTTTTTTTTTGA 20
V_AML_Q6_M00769 TRANSFAC - 39417464 39417478 6.0E-06 AGTGCTGTGGTTTCA 15
V_SMAD3_Q6_01_M01888 TRANSFAC - 39416786 39416798 1.0E-06 AGACAGACAGGCT 13
V_MAX_Q6_M01830 TRANSFAC - 39420475 39420486 2.0E-06 CAAGACACGTGC 12
V_PAX4_03_M00378 TRANSFAC - 39420633 39420644 4.0E-06 AACCTTCACCCC 12
V_HMGIY_Q3_M01010 TRANSFAC + 39417110 39417124 1.0E-05 ACTTTTTTTTTTTTT 15
V_EVI1_04_M00081 TRANSFAC - 39417112 39417126 6.0E-06 AAAAAAAAAAAAAAA 15
V_EVI1_04_M00081 TRANSFAC - 39417113 39417127 6.0E-06 AAAAAAAAAAAAAAA 15
V_EVI1_04_M00081 TRANSFAC - 39417114 39417128 6.0E-06 AAAAAAAAAAAAAAA 15
V_EVI1_04_M00081 TRANSFAC - 39417115 39417129 6.0E-06 AAAAAAAAAAAAAAA 15
V_EVI1_04_M00081 TRANSFAC - 39417116 39417130 6.0E-06 AAAAAAAAAAAAAAA 15
V_ETS_B_M00340 TRANSFAC - 39413801 39413814 5.0E-06 GAGAGGAAGCACCT 14
V_POU5F1_02_M02245 TRANSFAC + 39413786 39413800 0.0E+00 CATTGTCATGCAGAA 15
V_IRF_Q6_01_M00972 TRANSFAC + 39417459 39417469 4.0E-06 GGAAGTGAAAC 11
V_IRF2_Q6_M01882 TRANSFAC + 39417457 39417472 7.0E-06 CAGGAAGTGAAACCAC 16
V_HNF3_Q6_01_M01012 TRANSFAC + 39417112 39417129 8.0E-06 TTTTTTTTTTTTTTTTTT 18
V_HNF3_Q6_01_M01012 TRANSFAC + 39417113 39417130 8.0E-06 TTTTTTTTTTTTTTTTTT 18
V_TCFAP2E_04_M02926 TRANSFAC - 39417111 39417124 4.0E-06 AAAAAAAAAAAAAG 14
V_TCFAP2E_04_M02926 TRANSFAC - 39417112 39417125 1.0E-06 AAAAAAAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC - 39417113 39417126 1.0E-06 AAAAAAAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC - 39417114 39417127 1.0E-06 AAAAAAAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC - 39417115 39417128 1.0E-06 AAAAAAAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC - 39417116 39417129 1.0E-06 AAAAAAAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC - 39417117 39417130 1.0E-06 AAAAAAAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC - 39417118 39417131 2.0E-06 CAAAAAAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC - 39417119 39417132 3.0E-06 TCAAAAAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC - 39417120 39417133 2.0E-06 CTCAAAAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC - 39417122 39417135 1.0E-06 CTCTCAAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC + 39417475 39417488 6.0E-06 CACTTCAAAAAAAG 14
V_OCT2_02_M01761 TRANSFAC + 39416157 39416166 0.0E+00 TGAATATTCA 10
V_OCT2_02_M01761 TRANSFAC - 39416157 39416166 0.0E+00 TGAATATTCA 10
V_ETS_Q4_M00771 TRANSFAC - 39417457 39417468 2.0E-06 TTTCACTTCCTG 12
V_ELF4_04_M02850 TRANSFAC - 39417110 39417126 8.0E-06 AAAAAAAAAAAAAAAGT 17
V_ELF4_04_M02850 TRANSFAC - 39417112 39417128 6.0E-06 AAAAAAAAAAAAAAAAA 17
V_ELF4_04_M02850 TRANSFAC - 39417113 39417129 6.0E-06 AAAAAAAAAAAAAAAAA 17
V_ELF4_04_M02850 TRANSFAC - 39417114 39417130 6.0E-06 AAAAAAAAAAAAAAAAA 17
V_ELF4_04_M02850 TRANSFAC - 39417116 39417132 2.0E-06 TCAAAAAAAAAAAAAAA 17
V_ELF4_04_M02850 TRANSFAC - 39417117 39417133 3.0E-06 CTCAAAAAAAAAAAAAA 17
V_ELF4_04_M02850 TRANSFAC - 39417118 39417134 0.0E+00 TCTCAAAAAAAAAAAAA 17
V_ELF4_04_M02850 TRANSFAC - 39417119 39417135 9.0E-06 CTCTCAAAAAAAAAAAA 17
V_GC_01_M00255 TRANSFAC + 39416836 39416849 6.0E-06 CAGGGGAGGGGCTT 14
V_OCT1_02_M00136 TRANSFAC - 39416153 39416167 0.0E+00 ATGAATATTCATGTA 15
V_OCT1_02_M00136 TRANSFAC + 39416156 39416170 0.0E+00 ATGAATATTCATAGC 15
V_ZFP105_03_M02827 TRANSFAC - 39417109 39417123 1.0E-06 AAAAAAAAAAAAGTG 15
V_ZFP105_03_M02827 TRANSFAC - 39417110 39417124 2.0E-06 AAAAAAAAAAAAAGT 15
V_ZFP105_03_M02827 TRANSFAC - 39417111 39417125 0.0E+00 AAAAAAAAAAAAAAG 15
V_ZFP105_03_M02827 TRANSFAC - 39417112 39417126 0.0E+00 AAAAAAAAAAAAAAA 15
V_ZFP105_03_M02827 TRANSFAC - 39417113 39417127 0.0E+00 AAAAAAAAAAAAAAA 15
V_ZFP105_03_M02827 TRANSFAC - 39417114 39417128 0.0E+00 AAAAAAAAAAAAAAA 15
V_ZFP105_03_M02827 TRANSFAC - 39417115 39417129 0.0E+00 AAAAAAAAAAAAAAA 15
V_ZFP105_03_M02827 TRANSFAC - 39417116 39417130 0.0E+00 AAAAAAAAAAAAAAA 15
V_ZFP105_03_M02827 TRANSFAC - 39417117 39417131 1.0E-06 CAAAAAAAAAAAAAA 15
V_ZFP105_03_M02827 TRANSFAC - 39417118 39417132 2.0E-06 TCAAAAAAAAAAAAA 15
V_ZFP105_03_M02827 TRANSFAC - 39417119 39417133 1.0E-06 CTCAAAAAAAAAAAA 15
V_RUNX1_01_M02257 TRANSFAC - 39417466 39417476 2.0E-06 TGCTGTGGTTT 11
V_MYCMAX_02_M00123 TRANSFAC + 39420473 39420484 1.0E-06 AAGCACGTGTCT 12
V_IRF_Q6_M00772 TRANSFAC - 39417459 39417473 2.0E-06 TGTGGTTTCACTTCC 15
V_ISRE_01_M00258 TRANSFAC - 39417457 39417471 2.0E-06 TGGTTTCACTTCCTG 15
V_IRF3_06_M02871 TRANSFAC + 39413795 39413808 5.0E-06 GCAGAAAGGTGCTT 14
V_TEL2_Q6_M00678 TRANSFAC - 39417457 39417466 4.0E-06 TCACTTCCTG 10
V_OCT4_02_M01124 TRANSFAC + 39413787 39413801 0.0E+00 ATTGTCATGCAGAAA 15
V_ICSBP_Q6_M00699 TRANSFAC + 39417460 39417471 2.0E-06 GAAGTGAAACCA 12
V_ELK1_01_M00007 TRANSFAC - 39413801 39413816 4.0E-06 AAGAGAGGAAGCACCT 16
V_ELK1_01_M00007 TRANSFAC + 39417453 39417468 3.0E-06 CAAGCAGGAAGTGAAA 16
V_MTF1_06_M02882 TRANSFAC - 39417111 39417124 1.0E-06 AAAAAAAAAAAAAG 14
V_MTF1_06_M02882 TRANSFAC - 39417112 39417125 1.0E-06 AAAAAAAAAAAAAA 14
V_MTF1_06_M02882 TRANSFAC - 39417113 39417126 1.0E-06 AAAAAAAAAAAAAA 14
V_MTF1_06_M02882 TRANSFAC - 39417114 39417127 1.0E-06 AAAAAAAAAAAAAA 14
V_MTF1_06_M02882 TRANSFAC - 39417115 39417128 1.0E-06 AAAAAAAAAAAAAA 14
V_MTF1_06_M02882 TRANSFAC - 39417116 39417129 1.0E-06 AAAAAAAAAAAAAA 14
V_MTF1_06_M02882 TRANSFAC - 39417117 39417130 1.0E-06 AAAAAAAAAAAAAA 14
V_MTF1_06_M02882 TRANSFAC - 39417118 39417131 8.0E-06 CAAAAAAAAAAAAA 14
V_FAC1_01_M00456 TRANSFAC - 39417112 39417125 3.0E-06 AAAAAAAAAAAAAA 14
V_FAC1_01_M00456 TRANSFAC - 39417113 39417126 3.0E-06 AAAAAAAAAAAAAA 14
V_FAC1_01_M00456 TRANSFAC - 39417114 39417127 3.0E-06 AAAAAAAAAAAAAA 14
V_FAC1_01_M00456 TRANSFAC - 39417115 39417128 3.0E-06 AAAAAAAAAAAAAA 14
V_FAC1_01_M00456 TRANSFAC - 39417116 39417129 3.0E-06 AAAAAAAAAAAAAA 14
V_FAC1_01_M00456 TRANSFAC - 39417117 39417130 3.0E-06 AAAAAAAAAAAAAA 14
V_MAX_01_M00119 TRANSFAC + 39420472 39420485 4.0E-06 GAAGCACGTGTCTT 14
V_MAX_01_M00119 TRANSFAC - 39420472 39420485 4.0E-06 AAGACACGTGCTTC 14
V_ASCL2_04_M02841 TRANSFAC - 39420442 39420457 6.0E-06 TTTTCCCAGCCCTGTT 16
V_IRF1_Q6_01_M01881 TRANSFAC - 39417458 39417471 5.0E-06 TGGTTTCACTTCCT 14
V_SOX2_01_M02246 TRANSFAC + 39413785 39413799 0.0E+00 CCATTGTCATGCAGA 15
V_SRF_06_M02916 TRANSFAC - 39417108 39417124 1.0E-06 AAAAAAAAAAAAAGTGA 17
V_SRF_06_M02916 TRANSFAC - 39417109 39417125 1.0E-06 AAAAAAAAAAAAAAGTG 17
V_SRF_06_M02916 TRANSFAC - 39417110 39417126 0.0E+00 AAAAAAAAAAAAAAAGT 17
V_SRF_06_M02916 TRANSFAC - 39417111 39417127 1.0E-06 AAAAAAAAAAAAAAAAG 17
V_SRF_06_M02916 TRANSFAC - 39417112 39417128 0.0E+00 AAAAAAAAAAAAAAAAA 17
V_SRF_06_M02916 TRANSFAC - 39417113 39417129 0.0E+00 AAAAAAAAAAAAAAAAA 17
V_SRF_06_M02916 TRANSFAC - 39417114 39417130 0.0E+00 AAAAAAAAAAAAAAAAA 17
V_SRF_06_M02916 TRANSFAC - 39417115 39417131 0.0E+00 CAAAAAAAAAAAAAAAA 17
V_SRF_06_M02916 TRANSFAC - 39417116 39417132 0.0E+00 TCAAAAAAAAAAAAAAA 17
V_SRF_06_M02916 TRANSFAC - 39417117 39417133 0.0E+00 CTCAAAAAAAAAAAAAA 17
V_SRF_06_M02916 TRANSFAC - 39417118 39417134 0.0E+00 TCTCAAAAAAAAAAAAA 17
V_SRF_06_M02916 TRANSFAC - 39417119 39417135 4.0E-06 CTCTCAAAAAAAAAAAA 17
V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC - 39417466 39417473 1.0E-05 TGTGGTTT 8
V_SMAD3_Q6_M00701 TRANSFAC + 39416790 39416798 3.0E-06 TGTCTGTCT 9
V_SOX2_Q6_M01272 TRANSFAC + 39413781 39413796 3.0E-06 AGACCCATTGTCATGC 16
V_TCF3_05_M02920 TRANSFAC - 39417120 39417134 4.0E-06 TCTCAAAAAAAAAAA 15
V_PAX4_04_M00380 TRANSFAC - 39417099 39417128 0.0E+00 AAAAAAAAAAAAAAAAAGTGACCTCCCAGG 30
V_NANOG_02_M01247 TRANSFAC - 39417110 39417129 8.0E-06 AAAAAAAAAAAAAAAAAAGT 20
V_NANOG_02_M01247 TRANSFAC - 39417111 39417130 7.0E-06 AAAAAAAAAAAAAAAAAAAG 20
V_NANOG_02_M01247 TRANSFAC - 39417112 39417131 9.0E-06 CAAAAAAAAAAAAAAAAAAA 20
V_NANOG_02_M01247 TRANSFAC - 39417113 39417132 2.0E-06 TCAAAAAAAAAAAAAAAAAA 20
V_OCT4_01_M01125 TRANSFAC + 39413786 39413800 0.0E+00 CATTGTCATGCAGAA 15
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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