Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ZNF358 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 140467 zinc finger protein 358 chr19 + 7576003 - 7581503 7581003 Transcription Factor Binding Sites   Download all TFBS in the ZNF358 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXO4_forkhead_DBD_dimeric_14_1 SELEX - 7580419 7580432 2.0E-06 AAAAACATGTCTAT 14 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX - 7580093 7580105 1.0E-06 CTAAATATAAACA 13 FOXJ2_forkhead_DBD_monomeric_8_1 SELEX - 7580072 7580079 5.0E-06 ATAAACAA 8 FOXJ2_forkhead_DBD_monomeric_8_1 SELEX - 7580092 7580099 5.0E-06 ATAAACAA 8 SOX10_HMG_full_dimeric_16_1 SELEX + 7577586 7577601 2.0E-06 AGGAATGTTCAGCGTT 16 SOX9_HMG_full_dimeric_16_1 SELEX + 7577586 7577601 2.0E-06 AGGAATGTTCAGCGTT 16 FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 7580409 7580425 9.0E-06 TTAAGCAAAAATAGACA 17 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 7580095 7580106 2.0E-06 ACTAAATATAAA 12 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 7580071 7580082 0.0E+00 AATATAAACAAT 12 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 7580091 7580102 0.0E+00 AATATAAACAAT 12 FOXL1_forkhead_full_dimeric_13_1 SELEX - 7580072 7580084 4.0E-06 AGAATATAAACAA 13 FOXL1_forkhead_full_dimeric_13_1 SELEX - 7580092 7580104 3.0E-06 TAAATATAAACAA 13 SOX9_HMG_full_dimeric_17_3 SELEX + 7579951 7579967 5.0E-06 AAGAAGTGGCAGTCATT 17 TBX20_TBX_DBD_dimeric_19_1 SELEX + 7576371 7576389 8.0E-06 ATGTGTTAATGTCTTACGT 19 FOXC1_forkhead_DBD_monomeric_11_1 SELEX - 7580072 7580082 3.0E-06 AATATAAACAA 11 FOXC1_forkhead_DBD_monomeric_11_1 SELEX - 7580092 7580102 3.0E-06 AATATAAACAA 11 EWSR1-FLI1_MA0149.1 JASPAR + 7580386 7580403 5.0E-06 GGAAAAATTGGAGGAAGG 18 SOX7_HMG_full_dimeric_17_2 SELEX + 7579951 7579967 8.0E-06 AAGAAGTGGCAGTCATT 17 SOX9_HMG_DBD_monomeric_9_1 SELEX - 7580089 7580097 9.0E-06 AAACAATGG 9 NFYA_MA0060.1 JASPAR - 7577310 7577325 9.0E-06 ATGGGCCAATCAGCCT 16 GATA5_GATA_DBD_monomeric_8_1 SELEX - 7577644 7577651 7.0E-06 AGATAAGA 8 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 7580095 7580106 4.0E-06 ACTAAATATAAA 12 GATA4_GATA_DBD_monomeric_8_1 SELEX - 7577644 7577651 7.0E-06 AGATAAGA 8 TEAD1_TEA_full_monomeric_10_1 SELEX - 7577585 7577594 7.0E-06 AACATTCCTT 10 RUNX3_RUNX_full_monomeric_10_1 SELEX - 7580002 7580011 5.0E-06 CAACCACAAA 10 MEF2B_MADS_full_dimeric_12_1 SELEX - 7580095 7580106 5.0E-06 ACTAAATATAAA 12 Foxq1_MA0040.1 JASPAR + 7580070 7580080 1.0E-06 CATTGTTTATA 11 Foxq1_MA0040.1 JASPAR + 7580090 7580100 1.0E-06 CATTGTTTATA 11 MEF2A_MA0052.1 JASPAR + 7580096 7580105 6.0E-06 TTATATTTAG 10 SP1_MA0079.2 JASPAR - 7580903 7580912 7.0E-06 CCCCGCCCCC 10 Tcf21_bHLH_DBD_dimeric_14_1 SELEX - 7579246 7579259 8.0E-06 ATGACATCTGTTGT 14 SRY_MA0084.1 JASPAR - 7580071 7580079 5.0E-06 ATAAACAAT 9 SRY_MA0084.1 JASPAR - 7580091 7580099 5.0E-06 ATAAACAAT 9 GATA3_GATA_full_monomeric_8_1 SELEX - 7577644 7577651 7.0E-06 AGATAAGA 8 TBX20_TBX_full_dimeric_16_1 SELEX + 7576371 7576386 2.0E-06 ATGTGTTAATGTCTTA 16 TEAD3_TEA_DBD_monomeric_8_1 SELEX + 7577752 7577759 1.0E-05 ACATTCCA 8 T_TBX_full_dimeric_16_1 SELEX + 7579259 7579274 5.0E-06 TCACATGTATTTGTAA 16 T_TBX_full_dimeric_16_1 SELEX - 7579259 7579274 5.0E-06 TTACAAATACATGTGA 16 TFAP2C_TFAP_full_dimeric_12_1 SELEX + 7577808 7577819 6.0E-06 TGCCCCAGGCCA 12 Pou5f1_MA0142.1 JASPAR + 7576390 7576404 3.0E-06 CATTTTGTTGCAAAT 15 Tp53_p53l_DBD_dimeric_17_1 SELEX - 7577752 7577768 6.0E-06 ACAAGTTTCTGGAATGT 17 NR3C1_MA0113.1 JASPAR + 7579209 7579226 2.0E-06 AGGAAAAGAAAGTACTGT 18 FOXO3_forkhead_full_dimeric_14_1 SELEX + 7580419 7580432 5.0E-06 ATAGACATGTTTTT 14 FOXO3_forkhead_full_dimeric_14_1 SELEX - 7580419 7580432 5.0E-06 AAAAACATGTCTAT 14 TEAD4_TEA_DBD_monomeric_10_1 SELEX - 7577585 7577594 4.0E-06 AACATTCCTT 10 SOX9_MA0077.1 JASPAR - 7580089 7580097 2.0E-06 AAACAATGG 9 RUNX1_MA0002.2 JASPAR + 7580001 7580011 9.0E-06 TTTTGTGGTTG 11 THRB_nuclearreceptor_DBD_dimeric_19_1 SELEX - 7580873 7580891 8.0E-06 TTGTCCCCGGCCAGGCCAC 19 Foxj3_forkhead_DBD_monomeric_8_1 SELEX - 7580072 7580079 5.0E-06 ATAAACAA 8 Foxj3_forkhead_DBD_monomeric_8_1 SELEX - 7580092 7580099 5.0E-06 ATAAACAA 8 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 7580069 7580081 9.0E-06 ATATAAACAATGA 13 FOXO6_forkhead_DBD_dimeric_14_1 SELEX + 7580419 7580432 2.0E-06 ATAGACATGTTTTT 14 FOXO6_forkhead_DBD_dimeric_14_1 SELEX - 7580419 7580432 3.0E-06 AAAAACATGTCTAT 14 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 7580093 7580105 1.0E-06 CTAAATATAAACA 13 FOXB1_forkhead_DBD_monomeric_11_1 SELEX - 7580072 7580082 9.0E-06 AATATAAACAA 11 FOXB1_forkhead_DBD_monomeric_11_1 SELEX - 7580092 7580102 9.0E-06 AATATAAACAA 11 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX - 7577679 7577689 1.0E-05 CGCCCCAGGCT 11 FOXO1_forkhead_DBD_dimeric_14_1 SELEX + 7580419 7580432 9.0E-06 ATAGACATGTTTTT 14 FOXO1_forkhead_DBD_dimeric_14_1 SELEX - 7580419 7580432 2.0E-06 AAAAACATGTCTAT 14 V_XVENT1_01_M00445 TRANSFAC - 7580386 7580398 8.0E-06 CTCCAATTTTTCC 13 V_FREAC7_01_M00293 TRANSFAC - 7580069 7580084 3.0E-06 AGAATATAAACAATGA 16 V_FREAC7_01_M00293 TRANSFAC - 7580089 7580104 0.0E+00 TAAATATAAACAATGG 16 V_GATA1_Q6_M02004 TRANSFAC - 7577642 7577656 2.0E-06 GTAGAAGATAAGACT 15 V_OSF2_Q6_M00731 TRANSFAC - 7580002 7580009 1.0E-05 ACCACAAA 8 V_XFD1_01_M00267 TRANSFAC - 7580089 7580102 2.0E-06 AATATAAACAATGG 14 V_GATA2_02_M00348 TRANSFAC - 7577644 7577653 7.0E-06 GAAGATAAGA 10 V_FOXA2_04_M02749 TRANSFAC - 7580068 7580084 1.0E-06 AGAATATAAACAATGAT 17 V_FOXA2_04_M02749 TRANSFAC - 7580088 7580104 0.0E+00 TAAATATAAACAATGGT 17 V_SOX30_03_M02804 TRANSFAC - 7580085 7580100 1.0E-05 TATAAACAATGGTCAC 16 V_BCL6_01_M01183 TRANSFAC + 7577772 7577787 3.0E-06 TTTCTTGCAAGACTTT 16 V_AML3_Q6_M01856 TRANSFAC - 7580003 7580010 1.0E-05 AACCACAA 8 V_STAT_Q6_M00777 TRANSFAC - 7580481 7580493 1.0E-05 TGTTGTTCTTGGA 13 V_POU5F1_02_M02245 TRANSFAC + 7576390 7576404 3.0E-06 CATTTTGTTGCAAAT 15 V_AR_Q6_01_M01996 TRANSFAC - 7580484 7580498 1.0E-06 ACACATGTTGTTCTT 15 V_MAFB_03_M02879 TRANSFAC - 7576391 7576405 1.0E-06 CATTTGCAACAAAAT 15 V_CREB_Q4_01_M00917 TRANSFAC - 7576384 7576394 6.0E-06 AAATGACGTAA 11 V_MEF2_02_M00231 TRANSFAC - 7580091 7580112 1.0E-05 TTCTCCACTAAATATAAACAAT 22 V_SRY_02_M00160 TRANSFAC - 7580088 7580099 1.0E-05 ATAAACAATGGT 12 V_IRF2_Q6_M01882 TRANSFAC + 7579208 7579223 7.0E-06 AAGGAAAAGAAAGTAC 16 V_CEBP_C_M00201 TRANSFAC - 7576378 7576395 3.0E-06 AAAATGACGTAAGACATT 18 V_NFAT3_Q3_M01734 TRANSFAC - 7580385 7580394 4.0E-06 AATTTTTCCT 10 V_GTF2IRD1_01_M01229 TRANSFAC - 7577633 7577641 3.0E-06 GGGATTATG 9 V_HNF3_Q6_01_M01012 TRANSFAC + 7580068 7580085 4.0E-06 ATCATTGTTTATATTCTG 18 V_FOXJ1_03_M02750 TRANSFAC - 7580067 7580082 1.0E-06 AATATAAACAATGATG 16 V_FOXJ1_03_M02750 TRANSFAC - 7580087 7580102 5.0E-06 AATATAAACAATGGTC 16 V_SP1_03_M02281 TRANSFAC - 7580903 7580912 7.0E-06 CCCCGCCCCC 10 V_CREB_01_M00039 TRANSFAC - 7576384 7576391 1.0E-05 TGACGTAA 8 V_PITX2_Q6_M02114 TRANSFAC - 7579784 7579793 1.0E-06 TGTAATCCCA 10 V_SP1_02_M01303 TRANSFAC + 7580904 7580914 8.0E-06 GGGGCGGGGGC 11 V_NFY_Q6_01_M00775 TRANSFAC - 7577314 7577326 3.0E-06 AATGGGCCAATCA 13 V_FOXP3_01_M01599 TRANSFAC - 7580072 7580079 5.0E-06 ATAAACAA 8 V_FOXP3_01_M01599 TRANSFAC - 7580092 7580099 5.0E-06 ATAAACAA 8 V_NR3C1_01_M02219 TRANSFAC + 7579209 7579226 2.0E-06 AGGAAAAGAAAGTACTGT 18 V_P53_02_M00272 TRANSFAC + 7580421 7580430 2.0E-06 AGACATGTTT 10 V_P53_02_M00272 TRANSFAC - 7580421 7580430 9.0E-06 AAACATGTCT 10 V_SOX7_03_M02807 TRANSFAC - 7580082 7580103 2.0E-06 AAATATAAACAATGGTCACAGA 22 V_HELIOSA_02_M01004 TRANSFAC + 7580382 7580392 0.0E+00 AAAAGGAAAAA 11 V_FOXO1_02_M00474 TRANSFAC + 7580069 7580082 9.0E-06 TCATTGTTTATATT 14 V_RUNX1_01_M02257 TRANSFAC + 7580001 7580011 9.0E-06 TTTTGTGGTTG 11 V_HNF1_Q6_M00790 TRANSFAC + 7580092 7580109 3.0E-06 TTGTTTATATTTAGTGGA 18 V_TEF_Q6_M00672 TRANSFAC + 7579263 7579274 6.0E-06 ATGTATTTGTAA 12 V_NFAT_Q6_M00302 TRANSFAC + 7580382 7580393 1.0E-06 AAAAGGAAAAAT 12 V_AML2_01_M01759 TRANSFAC - 7580003 7580010 1.0E-05 AACCACAA 8 V_KROX_Q6_M00982 TRANSFAC - 7580904 7580917 6.0E-06 GCTGCCCCCGCCCC 14 V_RSRFC4_Q2_M00407 TRANSFAC - 7580092 7580108 4.0E-06 CCACTAAATATAAACAA 17 V_SP1_Q6_M00196 TRANSFAC + 7580902 7580914 4.0E-06 GGGGGGCGGGGGC 13 V_IRF3_Q3_M01279 TRANSFAC - 7579207 7579219 2.0E-06 TTTCTTTTCCTTT 13 V_IRF3_Q3_M01279 TRANSFAC - 7580410 7580422 4.0E-06 CTATTTTTGCTTA 13 V_HNF3_Q6_M00791 TRANSFAC - 7580091 7580103 2.0E-06 AAATATAAACAAT 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 7580093 7580103 6.0E-06 TGTTTATATTT 11 V_HNF1_Q6_01_M01011 TRANSFAC - 7580090 7580110 3.0E-06 CTCCACTAAATATAAACAATG 21 V_E4F1_Q6_01_M02091 TRANSFAC - 7576383 7576392 3.0E-06 ATGACGTAAG 10 V_SOX18_03_M02801 TRANSFAC + 7580067 7580082 4.0E-06 CATCATTGTTTATATT 16 V_SOX18_03_M02801 TRANSFAC + 7580087 7580102 7.0E-06 GACCATTGTTTATATT 16 V_CREBATF_Q6_M00981 TRANSFAC - 7576384 7576392 9.0E-06 ATGACGTAA 9 V_XFD2_01_M00268 TRANSFAC - 7580069 7580082 0.0E+00 AATATAAACAATGA 14 V_XFD2_01_M00268 TRANSFAC - 7580089 7580102 0.0E+00 AATATAAACAATGG 14 V_HFH1_01_M00129 TRANSFAC + 7580070 7580081 0.0E+00 CATTGTTTATAT 12 V_HFH1_01_M00129 TRANSFAC + 7580090 7580101 0.0E+00 CATTGTTTATAT 12 V_MEF2_Q6_01_M00941 TRANSFAC + 7580094 7580105 5.0E-06 GTTTATATTTAG 12 V_OCT4_02_M01124 TRANSFAC + 7576391 7576405 1.0E-06 ATTTTGTTGCAAATG 15 V_SOX11_03_M02795 TRANSFAC - 7580085 7580101 6.0E-06 ATATAAACAATGGTCAC 17 V_SOX11_03_M02795 TRANSFAC + 7580505 7580521 9.0E-06 TTACGAACAAAGATAGA 17 V_SOX9_B1_M00410 TRANSFAC - 7580087 7580100 3.0E-06 TATAAACAATGGTC 14 V_ISGF4G_04_M02875 TRANSFAC - 7580420 7580433 3.0E-06 TAAAAACATGTCTA 14 V_IRX5_01_M01472 TRANSFAC - 7580417 7580433 1.0E-06 TAAAAACATGTCTATTT 17 V_ICSBP_Q6_M00699 TRANSFAC + 7579211 7579222 3.0E-06 GAAAAGAAAGTA 12 V_TAL1BETAITF2_01_M00070 TRANSFAC + 7579245 7579260 6.0E-06 AACAACAGATGTCATC 16 V_GR_Q6_02_M01836 TRANSFAC - 7580483 7580495 9.0E-06 CATGTTGTTCTTG 13 V_SP4_Q5_M01273 TRANSFAC - 7580903 7580913 5.0E-06 CCCCCGCCCCC 11 V_FREAC2_01_M00290 TRANSFAC - 7580089 7580104 0.0E+00 TAAATATAAACAATGG 16 V_HBP1_04_M02866 TRANSFAC + 7580084 7580100 8.0E-06 TGTGACCATTGTTTATA 17 V_HFH8_01_M00294 TRANSFAC + 7580070 7580082 0.0E+00 CATTGTTTATATT 13 V_HFH8_01_M00294 TRANSFAC + 7580090 7580102 0.0E+00 CATTGTTTATATT 13 V_IRX3_02_M01485 TRANSFAC - 7580417 7580433 9.0E-06 TAAAAACATGTCTATTT 17 V_NFYC_Q5_M02107 TRANSFAC - 7577310 7577323 3.0E-06 GGGCCAATCAGCCT 14 V_POU5F1_01_M01307 TRANSFAC + 7580376 7580385 4.0E-06 CATGCAAAAA 10 V_GATA1_04_M00128 TRANSFAC - 7577642 7577654 7.0E-06 AGAAGATAAGACT 13 V_TAL1ALPHAE47_01_M00066 TRANSFAC + 7579245 7579260 7.0E-06 AACAACAGATGTCATC 16 V_SIRT6_01_M01797 TRANSFAC - 7577644 7577651 7.0E-06 AGATAAGA 8 V_FOXL1_04_M02753 TRANSFAC - 7580068 7580084 0.0E+00 AGAATATAAACAATGAT 17 V_FOXL1_04_M02753 TRANSFAC - 7580088 7580104 0.0E+00 TAAATATAAACAATGGT 17 V_ATF2_Q5_M01862 TRANSFAC - 7576383 7576394 4.0E-06 AAATGACGTAAG 12 V_AIRE_01_M00999 TRANSFAC + 7580377 7580402 4.0E-06 ATGCAAAAAGGAAAAATTGGAGGAAG 26 V_GATA3_01_M00077 TRANSFAC + 7580756 7580764 4.0E-06 GAGATAGGG 9 V_FOXO3_01_M00477 TRANSFAC + 7580069 7580082 2.0E-06 TCATTGTTTATATT 14 V_FOXO3_01_M00477 TRANSFAC + 7580089 7580102 5.0E-06 CCATTGTTTATATT 14 V_PITX2_Q2_M00482 TRANSFAC - 7579783 7579793 1.0E-06 TGTAATCCCAG 11 V_RSRFC4_01_M00026 TRANSFAC + 7580093 7580108 9.0E-06 TGTTTATATTTAGTGG 16 V_PLZF_02_M01075 TRANSFAC + 7576356 7576384 1.0E-05 GTGAATGGTGACTAAATGTGTTAATGTCT 29 V_IRX2_01_M01405 TRANSFAC - 7580417 7580433 2.0E-06 TAAAAACATGTCTATTT 17 V_EWSR1FLI1_01_M02252 TRANSFAC + 7580386 7580403 5.0E-06 GGAAAAATTGGAGGAAGG 18 V_FOXJ2_01_M00422 TRANSFAC - 7580068 7580085 1.0E-06 CAGAATATAAACAATGAT 18 V_FOXJ2_01_M00422 TRANSFAC - 7580088 7580105 1.0E-06 CTAAATATAAACAATGGT 18 V_E4F1_Q6_M00694 TRANSFAC + 7576383 7576392 9.0E-06 CTTACGTCAT 10 V_FOXO1_04_M01969 TRANSFAC + 7580413 7580432 1.0E-06 GCAAAAATAGACATGTTTTT 20 V_FOXO1_04_M01969 TRANSFAC + 7580481 7580500 3.0E-06 TCCAAGAACAACATGTGTAG 20 V_RFX3_05_M02892 TRANSFAC - 7580170 7580192 9.0E-06 AACTTTCCTTGGAGACACAGATC 23 V_FOXO1_01_M00473 TRANSFAC - 7580071 7580080 3.0E-06 TATAAACAAT 10 V_FOXO1_01_M00473 TRANSFAC - 7580091 7580100 3.0E-06 TATAAACAAT 10 V_PR_02_M00957 TRANSFAC - 7580479 7580505 4.0E-06 AAACTCTACACATGTTGTTCTTGGAGA 27 V_SOX12_03_M02796 TRANSFAC + 7580069 7580082 3.0E-06 TCATTGTTTATATT 14 V_SRY_05_M02917 TRANSFAC - 7580086 7580102 9.0E-06 AATATAAACAATGGTCA 17 V_SP1_Q2_01_M00933 TRANSFAC - 7580903 7580912 4.0E-06 CCCCGCCCCC 10 V_SP1_Q4_01_M00932 TRANSFAC + 7580902 7580914 8.0E-06 GGGGGGCGGGGGC 13 V_IRXB3_01_M01377 TRANSFAC - 7580417 7580433 3.0E-06 TAAAAACATGTCTATTT 17 V_DEC_Q1_M00997 TRANSFAC - 7579970 7579982 8.0E-06 CTCCAAGTGAACA 13 V_FOXK1_03_M02752 TRANSFAC - 7580068 7580084 0.0E+00 AGAATATAAACAATGAT 17 V_FOXK1_03_M02752 TRANSFAC - 7580088 7580104 0.0E+00 TAAATATAAACAATGGT 17 V_DMRT5_01_M01150 TRANSFAC - 7579237 7579251 7.0E-06 TGTTGTTTCTTTGGC 15 V_AP2_Q3_M00800 TRANSFAC - 7577674 7577689 4.0E-06 CGCCCCAGGCTAAAAG 16 V_OCT4_01_M01125 TRANSFAC + 7576390 7576404 3.0E-06 CATTTTGTTGCAAAT 15 V_TCF11_01_M00285 TRANSFAC + 7576388 7576400 6.0E-06 GTCATTTTGTTGC 13 V_HSF1_Q6_01_M02017 TRANSFAC - 7577754 7577767 2.0E-06 CAAGTTTCTGGAAT 14

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.