Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ASB9 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 140462 ankyrin repeat and SOCS box containing 9 chrX - 15287793 - 15293589 15288293 Transcription Factor Binding Sites   Download all TFBS in the ASB9 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU4F2_POU_full_monomeric_16_1 SELEX + 15288739 15288754 1.0E-06 CTAAATAAATAATGAA 16 NFE2_bZIP_DBD_dimeric_11_1 SELEX + 15287893 15287903 9.0E-06 TATGACTCACC 11 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 15293323 15293335 3.0E-06 ATAAACAACAAGA 13 Foxa2_MA0047.2 JASPAR - 15288738 15288749 9.0E-06 TATTTATTTAGA 12 FOXJ2_forkhead_DBD_monomeric_8_1 SELEX + 15293323 15293330 5.0E-06 ATAAACAA 8 NF-kappaB_MA0061.1 JASPAR - 15287938 15287947 3.0E-06 GGGACTTTCC 10 POU3F2_POU_DBD_monomeric_13_1 SELEX + 15288738 15288750 7.0E-06 TCTAAATAAATAA 13 FOXL1_forkhead_full_dimeric_13_1 SELEX + 15288738 15288750 1.0E-06 TCTAAATAAATAA 13 SOX8_HMG_full_dimeric_17_1 SELEX + 15287907 15287923 6.0E-06 CATCAATGGGTTTGAAA 17 NFIL3_MA0025.1 JASPAR - 15288637 15288647 1.0E-05 TTTTGTAACAT 11 STAT1_MA0137.2 JASPAR - 15288615 15288629 4.0E-06 CATTTCCCATAAGAA 15 Sox1_HMG_DBD_dimeric_13_1 SELEX - 15287909 15287921 7.0E-06 TCAAACCCATTGA 13 Pax4_MA0068.1 JASPAR - 15288604 15288633 2.0E-06 GACACATTTCCCATAAGAAACTCCCAGCAC 30 POU4F3_POU_DBD_monomeric_16_1 SELEX + 15288739 15288754 0.0E+00 CTAAATAAATAATGAA 16 CEBPB_bZIP_full_dimeric_10_1 SELEX + 15293302 15293311 9.0E-06 ATTGCACAAT 10 CEBPB_bZIP_full_dimeric_10_1 SELEX - 15293302 15293311 1.0E-05 ATTGTGCAAT 10 Foxq1_MA0040.1 JASPAR - 15293322 15293332 5.0E-06 TGTTGTTTATG 11 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 15288739 15288749 5.0E-06 CTAAATAAATA 11 RELA_MA0107.1 JASPAR - 15287938 15287947 6.0E-06 GGGACTTTCC 10 SP1_MA0079.2 JASPAR + 15288715 15288724 9.0E-06 CCCCTCCTCC 10 FOXI1_MA0042.1 JASPAR - 15293321 15293332 6.0E-06 TGTTGTTTATGT 12 NFATC1_NFAT_full_dimeric_20_1 SELEX + 15293284 15293303 6.0E-06 ATTGGAAACACTATTCTCAT 20 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 15288739 15288749 2.0E-06 CTAAATAAATA 11 POU1F1_POU_DBD_monomeric_17_1 SELEX + 15288736 15288752 4.0E-06 CTTCTAAATAAATAATG 17 Stat3_MA0144.1 JASPAR + 15287933 15287942 7.0E-06 TGCCAGGAAA 10 Evi1_MA0029.1 JASPAR - 15287696 15287709 3.0E-06 CAGACAAGACAAAT 14 POU3F1_POU_DBD_monomeric_12_2 SELEX + 15288739 15288750 9.0E-06 CTAAATAAATAA 12 JDP2_bZIP_full_dimeric_9_1 SELEX + 15287894 15287902 7.0E-06 ATGACTCAC 9 TFAP4_bHLH_full_dimeric_10_1 SELEX - 15287744 15287753 9.0E-06 CACAGCTGTT 10 SPDEF_ETS_full_putative-multimer_16_1 SELEX + 15287719 15287734 0.0E+00 GCAGAAAGAAGTATAC 16 Meis2_MEIS_DBD_dimeric_12_1 SELEX + 15287399 15287410 8.0E-06 TGACAGATGAGA 12 SRY_HMG_DBD_dimeric_13_1 SELEX - 15287909 15287921 9.0E-06 TCAAACCCATTGA 13 CEBPE_bZIP_DBD_dimeric_10_1 SELEX + 15293302 15293311 7.0E-06 ATTGCACAAT 10 Foxj3_forkhead_DBD_monomeric_8_1 SELEX + 15293323 15293330 5.0E-06 ATAAACAA 8 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 15288737 15288749 9.0E-06 TTCTAAATAAATA 13 MSC_bHLH_full_dimeric_10_1 SELEX + 15287744 15287753 9.0E-06 AACAGCTGTG 10 POU4F1_POU_DBD_monomeric_14_1 SELEX + 15288739 15288752 1.0E-06 CTAAATAAATAATG 14 V_NFKAPPAB65_01_M00052 TRANSFAC - 15287938 15287947 7.0E-06 GGGACTTTCC 10 V_NFKB_C_M00208 TRANSFAC - 15287937 15287948 2.0E-06 AGGGACTTTCCT 12 V_DBX1_01_M01483 TRANSFAC + 15288737 15288753 4.0E-06 TTCTAAATAAATAATGA 17 V_FREAC7_01_M00293 TRANSFAC + 15288738 15288753 1.0E-06 TCTAAATAAATAATGA 16 V_FREAC7_01_M00293 TRANSFAC + 15293318 15293333 6.0E-06 GGGACATAAACAACAA 16 V_FOXP3_Q4_M00992 TRANSFAC + 15288460 15288476 1.0E-05 ATCCGTTTGTTACATGG 17 V_NFKB_Q6_01_M00774 TRANSFAC + 15287933 15287948 4.0E-06 TGCCAGGAAAGTCCCT 16 V_HSF1_Q6_M01023 TRANSFAC + 15288604 15288620 2.0E-06 GTGCTGGGAGTTTCTTA 17 V_AR_02_M00953 TRANSFAC - 15288657 15288683 8.0E-06 CTGAAAGGAACAAATGGTTCTTTCCAA 27 V_BACH2_01_M00490 TRANSFAC - 15287893 15287903 5.0E-06 GGTGAGTCATA 11 V_FOXA2_04_M02749 TRANSFAC + 15288738 15288754 2.0E-06 TCTAAATAAATAATGAA 17 V_DMRT3_01_M01148 TRANSFAC + 15288463 15288477 3.0E-06 CGTTTGTTACATGGT 15 V_DMRT3_01_M01148 TRANSFAC - 15288634 15288648 9.0E-06 TTTTTGTAACATATA 15 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC + 15287759 15287770 2.0E-06 AATATATACCAG 12 V_FOXO4_02_M00476 TRANSFAC - 15293320 15293333 2.0E-06 TTGTTGTTTATGTC 14 V_HOXA13_02_M01297 TRANSFAC + 15287443 15287451 8.0E-06 AAGTAAAAC 9 V_MAFB_03_M02879 TRANSFAC + 15293300 15293314 6.0E-06 TCATTGCACAATAAT 15 V_EVI1_02_M00079 TRANSFAC - 15287698 15287708 1.0E-06 AGACAAGACAA 11 V_AP4_Q6_M00176 TRANSFAC - 15287744 15287753 8.0E-06 CACAGCTGTT 10 V_FOXO3A_Q1_M01137 TRANSFAC + 15288738 15288749 3.0E-06 TCTAAATAAATA 12 V_P50P50_Q3_M01223 TRANSFAC - 15287937 15287949 2.0E-06 AAGGGACTTTCCT 13 V_CEBP_Q2_M00190 TRANSFAC + 15293300 15293313 1.0E-06 TCATTGCACAATAA 14 V_P53_DECAMER_Q2_M00761 TRANSFAC + 15288490 15288499 4.0E-06 AGACAAGCCC 10 V_HNF3_Q6_01_M01012 TRANSFAC - 15288737 15288754 0.0E+00 TTCATTATTTATTTAGAA 18 V_SP1_03_M02281 TRANSFAC + 15288715 15288724 9.0E-06 CCCCTCCTCC 10 V_SPZ1_01_M00446 TRANSFAC - 15287833 15287847 2.0E-06 AGAGGAGGGTTGGGC 15 V_CMYB_Q5_M01821 TRANSFAC + 15288240 15288250 1.0E-06 CCTAACTGGCT 11 V_LYF1_01_M00141 TRANSFAC - 15288317 15288325 9.0E-06 TTTGGGAAA 9 V_FOXP3_01_M01599 TRANSFAC + 15293323 15293330 5.0E-06 ATAAACAA 8 V_LDSPOLYA_B_M00317 TRANSFAC - 15288364 15288379 8.0E-06 AAACTGAGTTTCCTTC 16 V_CEBPB_01_M00109 TRANSFAC - 15293300 15293313 9.0E-06 TTATTGTGCAATGA 14 V_STAT4_Q4_M01666 TRANSFAC - 15288613 15288626 2.0E-06 TTCCCATAAGAAAC 14 V_BACH1_01_M00495 TRANSFAC - 15287891 15287905 4.0E-06 GCGGTGAGTCATAGG 15 V_ZFP105_03_M02827 TRANSFAC + 15293322 15293336 0.0E+00 CATAAACAACAAGAG 15 V_BEL1_B_M00312 TRANSFAC + 15288297 15288324 2.0E-06 AAGTTGCTGATGTCACGTCCTTTCCCAA 28 V_FOXO1_02_M00474 TRANSFAC - 15293320 15293333 3.0E-06 TTGTTGTTTATGTC 14 V_XFD3_01_M00269 TRANSFAC + 15287750 15287763 7.0E-06 TGTGTAAAGAATAT 14 V_NFKB_Q6_M00194 TRANSFAC - 15287936 15287949 1.0E-06 AAGGGACTTTCCTG 14 V_EVI1_01_M00078 TRANSFAC - 15287693 15287708 9.0E-06 AGACAAGACAAATTCA 16 V_E47_02_M00071 TRANSFAC - 15287741 15287756 5.0E-06 TTACACAGCTGTTCAA 16 V_HNF3_Q6_M00791 TRANSFAC + 15288739 15288751 0.0E+00 CTAAATAAATAAT 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 15288739 15288749 3.0E-06 TATTTATTTAG 11 V_NKX22_02_M01372 TRANSFAC + 15287390 15287406 8.0E-06 GACACCACTTGACAGAT 17 V_REST_01_M01256 TRANSFAC - 15287797 15287818 4.0E-06 TGTGTGAGGTGTCCATGGGGCT 22 V_AP4_Q5_M00175 TRANSFAC - 15287744 15287753 8.0E-06 CACAGCTGTT 10 V_TAL1BETAE47_01_M00065 TRANSFAC - 15288576 15288591 4.0E-06 ATGTACAGATGGCCAG 16 V_SOX12_04_M02900 TRANSFAC - 15287456 15287471 3.0E-06 AAAGAGACAAAAGAGA 16 V_MEF2_04_M00233 TRANSFAC - 15293345 15293366 9.0E-06 CATGATAGCCAAAATAGCCTGC 22 V_HFH1_01_M00129 TRANSFAC - 15293321 15293332 2.0E-06 TGTTGTTTATGT 12 V_NKX3A_01_M00451 TRANSFAC + 15287439 15287450 4.0E-06 TTTTAAGTAAAA 12 V_STAT4_Q5_M02117 TRANSFAC + 15288618 15288627 4.0E-06 TTATGGGAAA 10 V_TBP_06_M02814 TRANSFAC + 15288738 15288753 2.0E-06 TCTAAATAAATAATGA 16 V_TBP_06_M02814 TRANSFAC - 15288738 15288753 2.0E-06 TCATTATTTATTTAGA 16 V_TAL1BETAITF2_01_M00070 TRANSFAC - 15288576 15288591 9.0E-06 ATGTACAGATGGCCAG 16 V_AP1_Q4_01_M00926 TRANSFAC - 15287894 15287901 1.0E-05 TGAGTCAT 8 V_TTF1_Q5_M02034 TRANSFAC + 15287392 15287405 4.0E-06 CACCACTTGACAGA 14 V_CEBPA_01_M00116 TRANSFAC + 15288637 15288650 8.0E-06 ATGTTACAAAAAAT 14 V_CEBPA_01_M00116 TRANSFAC + 15293300 15293313 3.0E-06 TCATTGCACAATAA 14 V_CAAT_C_M00200 TRANSFAC + 15293214 15293238 9.0E-06 CCCAATCTGTTTGCATGGCATTGTC 25 V_FOXL1_02_M02857 TRANSFAC + 15287442 15287457 2.0E-06 TAAGTAAAACAAAGTC 16 V_FOXL1_02_M02857 TRANSFAC + 15288735 15288750 9.0E-06 ACTTCTAAATAAATAA 16 V_FOXL1_04_M02753 TRANSFAC + 15288738 15288754 4.0E-06 TCTAAATAAATAATGAA 17 V_DMRT7_01_M01151 TRANSFAC + 15288466 15288479 7.0E-06 TTGTTACATGGTAG 14 V_FRA1_Q5_M01267 TRANSFAC - 15287894 15287901 1.0E-05 TGAGTCAT 8 V_FOXO3_01_M00477 TRANSFAC - 15293320 15293333 2.0E-06 TTGTTGTTTATGTC 14 V_STAT1STAT1_Q3_M01212 TRANSFAC - 15288616 15288628 2.0E-06 ATTTCCCATAAGA 13 V_FOXA2_03_M02260 TRANSFAC - 15288738 15288749 9.0E-06 TATTTATTTAGA 12 V_ZFP281_01_M01597 TRANSFAC - 15288715 15288725 7.0E-06 TGGAGGAGGGG 11 V_NFKAPPAB_01_M00054 TRANSFAC - 15287938 15287947 3.0E-06 GGGACTTTCC 10 V_FOXJ2_01_M00422 TRANSFAC + 15288737 15288754 0.0E+00 TTCTAAATAAATAATGAA 18 V_VDR_Q3_M00444 TRANSFAC - 15288703 15288717 1.0E-05 GGGTGAGGTAGGACA 15 V_EFC_Q6_M00626 TRANSFAC - 15293223 15293236 4.0E-06 CAATGCCATGCAAA 14 V_EKLF_Q5_M01874 TRANSFAC - 15288403 15288412 9.0E-06 CCCCACCCTG 10 V_FOXO1_01_M00473 TRANSFAC + 15293322 15293331 7.0E-06 CATAAACAAC 10 V_SOX12_03_M02796 TRANSFAC - 15287404 15287417 2.0E-06 GTATTGTTCTCATC 14 V_FOXO4_01_M00472 TRANSFAC + 15293323 15293333 7.0E-06 ATAAACAACAA 11 V_CEBP_Q2_01_M00912 TRANSFAC + 15293302 15293313 0.0E+00 ATTGCACAATAA 12 V_IRXB3_01_M01377 TRANSFAC - 15288582 15288598 7.0E-06 AAAGCACATGTACAGAT 17 V_CEBPE_01_M01772 TRANSFAC - 15293302 15293311 4.0E-06 ATTGTGCAAT 10 V_STAT1_Q6_M01823 TRANSFAC + 15288618 15288627 4.0E-06 TTATGGGAAA 10 V_DMRT1_01_M01146 TRANSFAC - 15287447 15287461 9.0E-06 AAGAGACTTTGTTTT 15 V_DMRT1_01_M01146 TRANSFAC + 15288466 15288480 7.0E-06 TTGTTACATGGTAGC 15 V_MTF1_05_M02778 TRANSFAC - 15288105 15288120 9.0E-06 AGAACGTGTGCAGCTC 16 V_STAT1_05_M01260 TRANSFAC + 15288615 15288636 8.0E-06 TTCTTATGGGAAATGTGTCTAT 22 V_PAX4_04_M00380 TRANSFAC + 15288689 15288718 2.0E-06 AGAATTTCACTAAATGTCCTACCTCACCCC 30 V_DMRT5_01_M01150 TRANSFAC + 15288376 15288390 1.0E-06 GTTTGTAACTTTTGA 15 V_CEBPA_Q6_M01866 TRANSFAC - 15293301 15293313 1.0E-06 TTATTGTGCAATG 13

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.