Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

CRHR1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 1394 corticotropin releasing hormone receptor 1 chr17 + 43692709 - 43698209 43697709 Transcription Factor Binding Sites   Download all TFBS in the CRHR1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Foxa2_MA0047.2 JASPAR + 43699845 43699856 2.0E-06 TGTTTACTCTGA 12 FOXA1_MA0148.1 JASPAR + 43699845 43699855 0.0E+00 TGTTTACTCTG 11 Zfp652_C2H2_DBD_monomeric_13_1 SELEX - 43699835 43699847 2.0E-06 ACAAATGGTTAAT 13 FOXF2_MA0030.1 JASPAR - 43699843 43699856 2.0E-06 TCAGAGTAAACAAA 14 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 43699843 43699854 1.0E-06 AGAGTAAACAAA 12 FOXO1_forkhead_DBD_monomeric_8_1 SELEX - 43699844 43699851 7.0E-06 GTAAACAA 8 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 43699841 43699851 1.0E-05 GTAAACAAATG 11 FOXB1_forkhead_DBD_putative-multimer_14_1 SELEX - 43699825 43699838 9.0E-06 TAATGACACATCTT 14 FOXG1_forkhead_DBD_putatively-multimeric_12_1 SELEX + 43697623 43697634 7.0E-06 ACGGACACCATT 12 MAX_MA0058.1 JASPAR - 43699812 43699821 5.0E-06 TAACACGTGA 10 FOXB1_forkhead_full_monomeric_9_1 SELEX - 43699844 43699852 7.0E-06 AGTAAACAA 9 FOXO3_forkhead_full_monomeric_8_1 SELEX - 43699844 43699851 7.0E-06 GTAAACAA 8 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 43699841 43699853 6.0E-06 GAGTAAACAAATG 13 V_HNF3B_01_M00131 TRANSFAC + 43699836 43699850 7.0E-06 TTAACCATTTGTTTA 15 V_XFD1_01_M00267 TRANSFAC - 43699841 43699854 8.0E-06 AGAGTAAACAAATG 14 V_FOXA2_04_M02749 TRANSFAC - 43699840 43699856 1.0E-06 TCAGAGTAAACAAATGG 17 V_FOXO4_02_M00476 TRANSFAC + 43699841 43699854 6.0E-06 CATTTGTTTACTCT 14 V_ZTA_Q2_M00711 TRANSFAC + 43697627 43697639 9.0E-06 ACACCATTGCTCA 13 V_SRY_02_M00160 TRANSFAC - 43699840 43699851 9.0E-06 GTAAACAAATGG 12 V_FOXO3A_Q1_M01137 TRANSFAC - 43699841 43699852 2.0E-06 AGTAAACAAATG 12 V_FOXJ1_03_M02750 TRANSFAC - 43699839 43699854 0.0E+00 AGAGTAAACAAATGGT 16 V_AFP1_Q6_M00616 TRANSFAC - 43698581 43698591 5.0E-06 AATAACAGCAC 11 V_ZNF219_01_M01122 TRANSFAC - 43697373 43697384 9.0E-06 CACCCCCAACCC 12 V_FREAC3_01_M00291 TRANSFAC - 43699841 43699856 3.0E-06 TCAGAGTAAACAAATG 16 V_FOXO1_02_M00474 TRANSFAC + 43699841 43699854 6.0E-06 CATTTGTTTACTCT 14 V_XFD3_01_M00269 TRANSFAC - 43699841 43699854 1.0E-06 AGAGTAAACAAATG 14 V_HNF3A_01_M01261 TRANSFAC - 43699844 43699853 4.0E-06 GAGTAAACAA 10 V_YY1_Q6_02_M01035 TRANSFAC + 43698611 43698621 1.0E-06 GCCTCCATTTT 11 V_XFD2_01_M00268 TRANSFAC - 43699841 43699854 7.0E-06 AGAGTAAACAAATG 14 V_MEF2_Q6_01_M00941 TRANSFAC + 43698585 43698596 9.0E-06 TGTTATTTTTGT 12 V_FREAC2_01_M00290 TRANSFAC - 43699841 43699856 4.0E-06 TCAGAGTAAACAAATG 16 V_FOXL1_04_M02753 TRANSFAC - 43699840 43699856 4.0E-06 TCAGAGTAAACAAATGG 17 V_FOXO3_01_M00477 TRANSFAC + 43699841 43699854 4.0E-06 CATTTGTTTACTCT 14 V_FOXA2_03_M02260 TRANSFAC + 43699845 43699856 2.0E-06 TGTTTACTCTGA 12 V_IPF1_Q4_01_M01013 TRANSFAC + 43699829 43699843 8.0E-06 TGTGTCATTAACCAT 15 V_FOXO1_01_M00473 TRANSFAC - 43699843 43699852 3.0E-06 AGTAAACAAA 10 V_HNF3B_Q6_M02014 TRANSFAC + 43699844 43699852 2.0E-06 TTGTTTACT 9 V_IRF1_01_M00062 TRANSFAC - 43698583 43698595 9.0E-06 CAAAAATAACAGC 13 V_FOXK1_03_M02752 TRANSFAC - 43699840 43699856 7.0E-06 TCAGAGTAAACAAATGG 17 V_NR2F2_04_M02887 TRANSFAC - 43697832 43697847 1.0E-06 CTCGTCGGGTCAGGGA 16 V_HOXC9_01_M01416 TRANSFAC + 43699828 43699843 1.0E-06 ATGTGTCATTAACCAT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.