Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ARID3C Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 138715 AT rich interactive domain 3C (BRIGHT-like) chr9 - 34627511 - 34633011 34628011 Transcription Factor Binding Sites   Download all TFBS in the ARID3C promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints YY2_C2H2_full_dimeric_12_1 SELEX - 34623637 34623648 3.0E-06 CCAGGCCGCCAT 12 Ar_MA0007.1 JASPAR - 34623694 34623715 3.0E-06 CTAGGTACATGAAGTACCTGTA 22 SP1_MA0079.2 JASPAR - 34625065 34625074 7.0E-06 CCCCGCCCCC 10 NR3C2_nuclearreceptor_DBD_dimeric_17_1 SELEX + 34623697 34623713 6.0E-06 AGGTACTTCATGTACCT 17 NR3C2_nuclearreceptor_DBD_dimeric_17_1 SELEX - 34623697 34623713 4.0E-06 AGGTACATGAAGTACCT 17 Zfp740_C2H2_DBD_monomeric_10_1 SELEX - 34625061 34625070 1.0E-05 GCCCCCCCAC 10 NR3C1_nuclearreceptor_DBD_dimeric_17_1 SELEX + 34623697 34623713 3.0E-06 AGGTACTTCATGTACCT 17 NR3C1_nuclearreceptor_DBD_dimeric_17_1 SELEX - 34623697 34623713 3.0E-06 AGGTACATGAAGTACCT 17 AR_nuclearreceptor_full_dimeric_17_1 SELEX + 34623697 34623713 4.0E-06 AGGTACTTCATGTACCT 17 AR_nuclearreceptor_full_dimeric_17_1 SELEX - 34623697 34623713 2.0E-06 AGGTACATGAAGTACCT 17 V_SP1_Q6_01_M00931 TRANSFAC + 34623520 34623529 4.0E-06 GGGGCGGGGC 10 V_SP1_03_M02281 TRANSFAC - 34625065 34625074 7.0E-06 CCCCGCCCCC 10 V_GKLF_02_M01588 TRANSFAC + 34629272 34629283 5.0E-06 GCCCCGCCCAGC 12 V_SP1_02_M01303 TRANSFAC + 34625066 34625076 3.0E-06 GGGGCGGGGGG 11 V_GC_01_M00255 TRANSFAC + 34623518 34623531 4.0E-06 GAGGGGCGGGGCCG 14 V_KROX_Q6_M00982 TRANSFAC - 34625060 34625073 4.0E-06 CCCGCCCCCCCACC 14 V_KROX_Q6_M00982 TRANSFAC - 34629074 34629087 4.0E-06 CCCGCCCCCGCGGC 14 V_OLF1_01_M00261 TRANSFAC - 34623647 34623668 4.0E-06 CTCAGCTCCCCAGGGGAGCTCC 22 V_SP1_Q6_M00196 TRANSFAC + 34623518 34623530 1.0E-06 GAGGGGCGGGGCC 13 V_SP1_Q6_M00196 TRANSFAC + 34625064 34625076 6.0E-06 GGGGGGCGGGGGG 13 V_EGR1_Q6_M01873 TRANSFAC + 34629077 34629086 4.0E-06 GCGGGGGCGG 10 V_PAX5_01_M00143 TRANSFAC - 34623525 34623552 8.0E-06 TCAGGACCCAGCCTTGGGTCCCGGCCCC 28 V_AR_04_M01201 TRANSFAC - 34623698 34623712 6.0E-06 GGTACATGAAGTACC 15 V_ZNF515_01_M01231 TRANSFAC + 34625069 34625078 1.0E-05 GCGGGGGGTA 10 V_SP4_Q5_M01273 TRANSFAC - 34623519 34623529 8.0E-06 GCCCCGCCCCT 11 V_SP4_Q5_M01273 TRANSFAC - 34625065 34625075 5.0E-06 CCCCCGCCCCC 11 V_SMAD4_04_M02898 TRANSFAC + 34623920 34623936 1.0E-06 GACTTCCCGCCACACTT 17 V_T3R_Q6_M00963 TRANSFAC - 34624198 34624206 7.0E-06 CCTGTCCTT 9 V_RFX3_05_M02892 TRANSFAC - 34623965 34623987 5.0E-06 TGTTTCGCCTGGTGACCGCCAAG 23 V_SP1_Q2_01_M00933 TRANSFAC - 34623519 34623528 7.0E-06 CCCCGCCCCT 10 V_SP1_Q2_01_M00933 TRANSFAC - 34625065 34625074 4.0E-06 CCCCGCCCCC 10 V_SP1_Q4_01_M00932 TRANSFAC + 34623518 34623530 2.0E-06 GAGGGGCGGGGCC 13 V_AR_01_M00481 TRANSFAC - 34623698 34623712 5.0E-06 GGTACATGAAGTACC 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.