Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ATF2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS Motifs 1386 activating transcription factor 2 chr2 - 176032434 - 176037934 176032934 V_CREBATF_Q6_M00981 V_CREBP1_Q2_M00179 V_ATF2_Q5_M01862 V_CREBP1_01_M00040 Transcription Factor Binding Sites   Download all TFBS in the ATF2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Foxa2_MA0047.2 JASPAR + 176032836 176032847 6.0E-06 TGTTTACAAAGC 12 RARB_nuclearreceptor_full_dimeric_16_1 SELEX + 176032782 176032797 9.0E-06 CCAGGTCACTAGTTCA 16 THRA_nuclearreceptor_FL_dimeric_18_1 SELEX - 176032773 176032790 3.0E-06 GTGACCTGGAAAGGTGAG 18 NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX + 176032876 176032886 7.0E-06 TTTAAAGGCCA 11 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 176032241 176032252 8.0E-06 GCTGAAAATAGA 12 NR2F1_nuclearreceptor_DBD_monomeric_13_1 SELEX - 176032750 176032762 6.0E-06 CAGAGGTCAGCAG 13 CEBPD_bZIP_DBD_dimeric_10_1 SELEX + 176031142 176031151 2.0E-06 ATTACGCAAC 10 CEBPG_bZIP_full_dimeric_10_1 SELEX + 176031142 176031151 2.0E-06 ATTACGCAAC 10 FOXO3_MA0157.1 JASPAR - 176032836 176032843 7.0E-06 TGTAAACA 8 ZNF435_C2H2_full_dimeric_18_1 SELEX + 176032834 176032851 0.0E+00 CGTGTTTACAAAGCACCC 18 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX + 176033478 176033488 5.0E-06 AGCCTGAGGCG 11 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX - 176033478 176033488 4.0E-06 CGCCTCAGGCT 11 HLF_bZIP_full_dimeric_12_1 SELEX + 176031141 176031152 8.0E-06 TATTACGCAACT 12 EWSR1-FLI1_MA0149.1 JASPAR - 176033005 176033022 1.0E-06 AGAAGGAAGGCAAGAAGG 18 NFYA_MA0060.1 JASPAR - 176033230 176033245 5.0E-06 GACAGCCAATCACAGT 16 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX + 176033478 176033488 9.0E-06 AGCCTGAGGCG 11 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX - 176033478 176033488 2.0E-06 CGCCTCAGGCT 11 NR2F1_MA0017.1 JASPAR + 176032416 176032429 8.0E-06 GGACCTCTGAACTG 14 NR2F1_MA0017.1 JASPAR + 176032754 176032767 2.0E-06 TGACCTCTGCCCAT 14 RORA_nuclearreceptor_DBD_dimeric_19_1 SELEX + 176032779 176032797 1.0E-06 TTTCCAGGTCACTAGTTCA 19 THRB_nuclearreceptor_DBD_dimeric_18_1 SELEX - 176032773 176032790 5.0E-06 GTGACCTGGAAAGGTGAG 18 CEBPB_bZIP_full_dimeric_10_1 SELEX + 176031142 176031151 2.0E-06 ATTACGCAAC 10 FOXO4_forkhead_DBD_putatively-multimeric_12_1 SELEX - 176035575 176035586 7.0E-06 AATCCCCACATG 12 NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX + 176032871 176032886 3.0E-06 GGCACTTTAAAGGCCA 16 NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX - 176032871 176032886 4.0E-06 TGGCCTTTAAAGTGCC 16 SREBF2_bHLH_DBD_dimeric_10_1 SELEX - 176033039 176033048 6.0E-06 ATCACCTGAC 10 znf143_MA0088.1 JASPAR - 176033347 176033366 8.0E-06 GAGGACCCATCCTGCTTTCC 20 znf143_MA0088.1 JASPAR - 176035577 176035596 5.0E-06 TAGTTCCCATAATCCCCACA 20 SP4_C2H2_full_monomeric_17_1 SELEX + 176032099 176032115 8.0E-06 TAAGCCCCGCCCCACCG 17 Srebf1_bHLH_DBD_dimeric_10_1 SELEX - 176033039 176033048 5.0E-06 ATCACCTGAC 10 NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX + 176032783 176032798 5.0E-06 CAGGTCACTAGTTCAT 16 TFAP2A_TFAP_DBD_dimeric_13_1 SELEX - 176032626 176032638 9.0E-06 AGCCCTTGGGGCG 13 Evi1_MA0029.1 JASPAR - 176030701 176030714 7.0E-06 AAGCTAAGATAATA 14 TFAP2C_TFAP_full_dimeric_11_1 SELEX - 176033478 176033488 5.0E-06 CGCCTCAGGCT 11 SPDEF_ETS_full_putative-multimer_16_1 SELEX - 176032481 176032496 2.0E-06 AGAGGAAAAAGGAATA 16 HLF_MA0043.1 JASPAR + 176031141 176031152 9.0E-06 TATTACGCAACT 12 TFAP2A_MA0003.1 JASPAR - 176031985 176031993 8.0E-06 GCCCTAGGG 9 THRB_nuclearreceptor_DBD_dimeric_19_1 SELEX + 176032427 176032445 5.0E-06 CTGACCCAAGTAGGGTGAA 19 CEBPE_bZIP_DBD_dimeric_10_1 SELEX + 176031142 176031151 2.0E-06 ATTACGCAAC 10 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX + 176032783 176032797 1.0E-06 CAGGTCACTAGTTCA 15 RARA_nuclearreceptor_full_dimeric_15_1 SELEX + 176032783 176032797 2.0E-06 CAGGTCACTAGTTCA 15 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX + 176033478 176033488 7.0E-06 AGCCTGAGGCG 11 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX - 176033478 176033488 2.0E-06 CGCCTCAGGCT 11 V_AP2ALPHA_01_M00469 TRANSFAC - 176031985 176031993 8.0E-06 GCCCTAGGG 9 V_FOXP1_01_M00987 TRANSFAC - 176033557 176033576 2.0E-06 TAAGTTGTGTGGGGTTTTTT 20 V_HNF3B_01_M00131 TRANSFAC + 176032006 176032020 1.0E-05 CAAATTATTTCTTTA 15 V_APOLYA_B_M00310 TRANSFAC - 176032000 176032014 7.0E-06 AATAATTTGCTTTTC 15 V_EVI1_05_M00082 TRANSFAC - 176030703 176030713 2.0E-06 AGCTAAGATAA 11 V_FOXO3_02_M02270 TRANSFAC - 176032836 176032843 7.0E-06 TGTAAACA 8 V_XFD1_01_M00267 TRANSFAC - 176032832 176032845 6.0E-06 TTTGTAAACACGGC 14 V_ZFP410_04_M02936 TRANSFAC - 176033303 176033319 6.0E-06 CCTTTCCTCCCCTCACA 17 V_STAT3STAT3_Q3_M01220 TRANSFAC + 176032664 176032677 4.0E-06 GTGATGGGAAACGG 14 V_COE1_Q6_M01871 TRANSFAC + 176031984 176031997 7.0E-06 TCCCTAGGGCATTG 14 V_LMAF_Q2_M01139 TRANSFAC - 176032750 176032758 6.0E-06 GGTCAGCAG 9 V_TCF4_Q5_01_M02033 TRANSFAC + 176033108 176033117 5.0E-06 ATCAAAGAGC 10 V_SP1_Q6_01_M00931 TRANSFAC - 176032102 176032111 4.0E-06 GGGGCGGGGC 10 V_GTF2IRD1_01_M01229 TRANSFAC + 176035581 176035589 3.0E-06 GGGATTATG 9 V_EAR2_Q2_M01728 TRANSFAC + 176032754 176032767 3.0E-06 TGACCTCTGCCCAT 14 V_HFH4_01_M00742 TRANSFAC - 176032002 176032014 1.0E-05 AATAATTTGCTTT 13 V_PPAR_DR1_Q2_M00763 TRANSFAC + 176032754 176032766 4.0E-06 TGACCTCTGCCCA 13 V_COUPTF_Q6_M01036 TRANSFAC + 176032749 176032771 1.0E-06 CCTGCTGACCTCTGCCCATCGTT 23 V_CEBPB_01_M00109 TRANSFAC - 176031176 176031189 4.0E-06 AGATTAAGAAAGTT 14 V_STAT4_Q4_M01666 TRANSFAC - 176035580 176035593 6.0E-06 TTCCCATAATCCCC 14 V_PPARGRXRA_01_M02262 TRANSFAC - 176032754 176032768 4.0E-06 GATGGGCAGAGGTCA 15 V_ELF4_04_M02850 TRANSFAC + 176030711 176030727 3.0E-06 GCTTAAAAACAAAAAAC 17 V_GC_01_M00255 TRANSFAC - 176032100 176032113 6.0E-06 GTGGGGCGGGGCTT 14 V_HELIOSA_02_M01004 TRANSFAC - 176032480 176032490 1.0E-05 AAAAGGAATAA 11 V_CEBPE_Q6_M01868 TRANSFAC + 176031174 176031187 2.0E-06 TGAACTTTCTTAAT 14 V_SREBP1_01_M00220 TRANSFAC - 176033039 176033049 6.0E-06 AATCACCTGAC 11 V_GFI1_01_M00250 TRANSFAC - 176033223 176033246 5.0E-06 CGACAGCCAATCACAGTCTTCCAC 24 V_COUP_01_M00158 TRANSFAC + 176032416 176032429 8.0E-06 GGACCTCTGAACTG 14 V_COUP_01_M00158 TRANSFAC + 176032754 176032767 2.0E-06 TGACCTCTGCCCAT 14 V_NFAT_Q6_M00302 TRANSFAC - 176032486 176032497 2.0E-06 CAGAGGAAAAAG 12 V_XFD3_01_M00269 TRANSFAC - 176032011 176032024 1.0E-05 TATGTAAAGAAATA 14 V_SP4_03_M02810 TRANSFAC - 176033167 176033183 1.0E-06 GGTCCCGCCCCCTCCAG 17 V_RSRFC4_Q2_M00407 TRANSFAC - 176032238 176032254 8.0E-06 CGGCTGAAAATAGAATC 17 V_SP1_Q6_M00196 TRANSFAC + 176033171 176033183 3.0E-06 AGGGGGCGGGACC 13 V_EVI1_01_M00078 TRANSFAC - 176030698 176030713 9.0E-06 AGCTAAGATAATAGTA 16 V_MAZ_Q6_01_M02023 TRANSFAC + 176032451 176032464 9.0E-06 TTCGGAGGGAGGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC - 176033541 176033554 8.0E-06 AGGGGAGGGATGGG 14 V_MEF2_03_M00232 TRANSFAC - 176032237 176032258 9.0E-06 GGCGCGGCTGAAAATAGAATCA 22 V_SP1SP3_Q4_M01219 TRANSFAC - 176033169 176033179 1.0E-06 CCGCCCCCTCC 11 V_PPARG_03_M00528 TRANSFAC - 176032754 176032770 8.0E-06 ACGATGGGCAGAGGTCA 17 V_ERR1_Q3_M01841 TRANSFAC - 176032875 176032889 6.0E-06 CCGTGGCCTTTAAAG 15 V_STAF_02_M00264 TRANSFAC - 176035575 176035595 9.0E-06 AGTTCCCATAATCCCCACATG 21 V_PPARA_02_M00518 TRANSFAC - 176032990 176033008 7.0E-06 AAGGGGCGTGTGGGTGAAG 19 V_BRACH_01_M00150 TRANSFAC + 176030514 176030537 7.0E-06 AGCCTCTCGAGTAGGTGGGACTAC 24 V_TFIII_Q6_M00706 TRANSFAC + 176032515 176032523 6.0E-06 AGAGGGAGG 9 V_ZFP187_04_M02934 TRANSFAC + 176031975 176031990 7.0E-06 CGGCCCTGGTCCCTAG 16 V_NFYC_Q5_M02107 TRANSFAC - 176033230 176033243 1.0E-06 CAGCCAATCACAGT 14 V_SMAD4_04_M02898 TRANSFAC + 176032268 176032284 5.0E-06 TCCTCCCCGCCACCATC 17 V_AREB6_02_M00413 TRANSFAC + 176032772 176032783 1.0E-05 ACTCACCTTTCC 12 V_DR1_Q3_M00762 TRANSFAC - 176032754 176032766 8.0E-06 TGGGCAGAGGTCA 13 V_GATA3_02_M00350 TRANSFAC - 176030701 176030710 1.0E-05 TAAGATAATA 10 V_HNF4_Q6_01_M01031 TRANSFAC - 176032753 176032766 9.0E-06 TGGGCAGAGGTCAG 14 V_NFY_01_M00287 TRANSFAC - 176033230 176033245 5.0E-06 GACAGCCAATCACAGT 16 V_FPM315_01_M01587 TRANSFAC - 176032265 176032276 1.0E-06 CGGGGAGGAGGA 12 V_ASCL2_04_M02841 TRANSFAC - 176032313 176032328 2.0E-06 GTCTCCCCACCCAGTA 16 V_ASCL2_04_M02841 TRANSFAC + 176032340 176032355 3.0E-06 CTCTCCCCGCCCAACC 16 V_FOXA2_03_M02260 TRANSFAC + 176032836 176032847 6.0E-06 TGTTTACAAAGC 12 V_PLZF_02_M01075 TRANSFAC - 176030694 176030722 5.0E-06 TTGTTTTTAAGCTAAGATAATAGTAGAGG 29 V_ZFP281_01_M01597 TRANSFAC + 176032676 176032686 4.0E-06 GGGGGGTGGGG 11 V_SRF_06_M02916 TRANSFAC + 176030711 176030727 2.0E-06 GCTTAAAAACAAAAAAC 17 V_SRF_06_M02916 TRANSFAC + 176030712 176030728 4.0E-06 CTTAAAAACAAAAAACG 17 V_SRF_06_M02916 TRANSFAC - 176032007 176032023 8.0E-06 ATGTAAAGAAATAATTT 17 V_EWSR1FLI1_01_M02252 TRANSFAC - 176033005 176033022 1.0E-06 AGAAGGAAGGCAAGAAGG 18 V_HLF_01_M00260 TRANSFAC - 176031142 176031151 1.0E-05 GTTGCGTAAT 10 V_DR3_Q4_M00966 TRANSFAC + 176031172 176031192 7.0E-06 CATGAACTTTCTTAATCTGCA 21 V_PAX4_02_M00377 TRANSFAC - 176032005 176032015 9.0E-06 AAATAATTTGC 11 V_SOX12_03_M02796 TRANSFAC - 176030712 176030725 4.0E-06 TTTTTGTTTTTAAG 14 V_SRY_05_M02917 TRANSFAC + 176030712 176030728 8.0E-06 CTTAAAAACAAAAAACG 17 V_GMEB1_04_M02865 TRANSFAC + 176032694 176032709 2.0E-06 TGAGCGACGTCGCCAT 16 V_GMEB1_04_M02865 TRANSFAC - 176032694 176032709 7.0E-06 ATGGCGACGTCGCTCA 16 V_NFYA_Q5_M02106 TRANSFAC - 176033230 176033243 1.0E-06 CAGCCAATCACAGT 14 V_P300_01_M00033 TRANSFAC - 176031961 176031974 0.0E+00 AAAGGGAGTGTGTG 14 V_SP1_Q4_01_M00932 TRANSFAC + 176032515 176032527 6.0E-06 AGAGGGAGGGGCC 13 V_SP1_Q4_01_M00932 TRANSFAC - 176032980 176032992 5.0E-06 AAGGGGAGGGGCG 13 V_SP1_Q4_01_M00932 TRANSFAC + 176033171 176033183 5.0E-06 AGGGGGCGGGACC 13 V_CEBPE_01_M01772 TRANSFAC + 176031142 176031151 7.0E-06 ATTACGCAAC 10 V_COUP_DR1_Q6_M00765 TRANSFAC + 176032754 176032766 5.0E-06 TGACCTCTGCCCA 13 V_EVI1_03_M00080 TRANSFAC - 176030703 176030713 6.0E-06 AGCTAAGATAA 11 PPARG_RXRA_MA0065.2 JASPAR - 176032754 176032768 4.0E-06 GATGGGCAGAGGTCA 15 V_TR4_03_M01782 TRANSFAC - 176032416 176032428 5.0E-06 AGTTCAGAGGTCC 13 V_NANOG_02_M01247 TRANSFAC + 176030711 176030730 5.0E-06 GCTTAAAAACAAAAAACGCC 20 V_TCF4_01_M01705 TRANSFAC - 176033107 176033115 5.0E-06 TCTTTGATG 9

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.