Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

TAF1L Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 138474 chr9 + 32630667 - 32640667 0 Transcription Factor Binding Sites   Download all TFBS in the TAF1L promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 32633357 32633374 8.0E-06 ATTGTAAATATGGGGAAA 18 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 32633085 32633097 2.0E-06 GTAAATAAAAACC 13 POU2F1_POU_DBD_dimeric_14_1 SELEX + 32633108 32633121 5.0E-06 CTCGAATATGCATA 14 FOXL1_forkhead_full_dimeric_13_1 SELEX + 32633084 32633096 6.0E-06 GGTAAATAAAAAC 13 FOXC1_forkhead_DBD_monomeric_11_1 SELEX - 32633364 32633374 8.0E-06 ATTGTAAATAT 11 POU1F1_POU_DBD_monomeric_14_1 SELEX - 32633110 32633123 3.0E-06 AATATGCATATTCG 14 POU1F1_POU_DBD_monomeric_14_1 SELEX + 32633112 32633125 3.0E-06 AATATGCATATTGG 14 POU2F2_POU_DBD_monomeric_11_1 SELEX - 32633112 32633122 4.0E-06 ATATGCATATT 11 POU2F2_POU_DBD_monomeric_11_1 SELEX + 32633113 32633123 4.0E-06 ATATGCATATT 11 POU3F4_POU_DBD_monomeric_9_1 SELEX - 32633113 32633121 8.0E-06 TATGCATAT 9 POU3F4_POU_DBD_monomeric_9_1 SELEX + 32633114 32633122 8.0E-06 TATGCATAT 9 IRF7_IRF_DBD_trimeric_17_1 SELEX + 32633229 32633245 1.0E-06 GATCAGAAAATCAGTTT 17 Pou2f2_POU_DBD_monomeric_9_1 SELEX - 32633113 32633121 8.0E-06 TATGCATAT 9 Pou2f2_POU_DBD_monomeric_9_1 SELEX + 32633114 32633122 8.0E-06 TATGCATAT 9 POU3F3_POU_DBD_monomeric_13_1 SELEX - 32633111 32633123 5.0E-06 AATATGCATATTC 13 POU3F3_POU_DBD_monomeric_13_1 SELEX + 32633112 32633124 4.0E-06 AATATGCATATTG 13 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 32633085 32633095 1.0E-06 GTAAATAAAAA 11 Pou2f2_POU_DBD_dimeric_14_1 SELEX - 32633108 32633121 3.0E-06 TATGCATATTCGAG 14 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 32633085 32633095 1.0E-06 GTAAATAAAAA 11 POU3F1_POU_DBD_monomeric_12_1 SELEX - 32633111 32633122 8.0E-06 ATATGCATATTC 12 POU3F1_POU_DBD_monomeric_12_1 SELEX + 32633113 32633124 9.0E-06 ATATGCATATTG 12 POU5F1P1_POU_DBD_monomeric_12_1 SELEX + 32633109 32633120 8.0E-06 TCGAATATGCAT 12 POU2F1_POU_DBD_monomeric_12_1 SELEX + 32633112 32633123 2.0E-06 AATATGCATATT 12 POU2F1_POU_DBD_monomeric_12_1 SELEX - 32633112 32633123 2.0E-06 AATATGCATATT 12 CPEB1_RRM_full_monomeric_8_1 SELEX + 32633088 32633095 4.0E-06 AATAAAAA 8 FOXB1_forkhead_full_monomeric_9_1 SELEX - 32633364 32633372 5.0E-06 TGTAAATAT 9 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 32633083 32633095 7.0E-06 CGGTAAATAAAAA 13 FOXB1_forkhead_DBD_monomeric_11_1 SELEX - 32633364 32633374 2.0E-06 ATTGTAAATAT 11 RORA_2_MA0072.1 JASPAR + 32632299 32632312 5.0E-06 GTTCTGTAGGTCAA 14 HNF1A_MA0046.1 JASPAR - 32633084 32633097 5.0E-06 GGTTTTTATTTACC 14 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 32633085 32633098 8.0E-06 GTAAATAAAAACCT 14 V_POU3F3_01_M03090 TRANSFAC - 32633109 32633125 2.0E-06 CCAATATGCATATTCGA 17 V_POU3F3_01_M03090 TRANSFAC + 32633110 32633126 8.0E-06 CGAATATGCATATTGGC 17 V_XFD1_01_M00267 TRANSFAC - 32633361 32633374 6.0E-06 ATTGTAAATATGGG 14 V_NF1A_Q6_M02103 TRANSFAC + 32633384 32633399 3.0E-06 CAGGATCTTTGCCAGG 16 V_BCL6_01_M01183 TRANSFAC + 32633406 32633421 3.0E-06 TTTATAATAGTTCTTT 16 V_HOXA13_02_M01297 TRANSFAC + 32633087 32633095 4.0E-06 AAATAAAAA 9 V_OCTAMER_01_M01324 TRANSFAC - 32633109 32633125 2.0E-06 CCAATATGCATATTCGA 17 V_OCTAMER_01_M01324 TRANSFAC + 32633110 32633126 8.0E-06 CGAATATGCATATTGGC 17 V_EVI1_02_M00079 TRANSFAC - 32633214 32633224 7.0E-06 GGACAAGACAG 11 V_POU2F3_01_M01476 TRANSFAC - 32633109 32633124 3.0E-06 CAATATGCATATTCGA 16 V_FOXO3A_Q1_M01137 TRANSFAC + 32633084 32633095 9.0E-06 GGTAAATAAAAA 12 V_IRF3_05_M02767 TRANSFAC - 32633397 32633410 6.0E-06 ATAAACGGAAACCT 14 V_OCT2_02_M01761 TRANSFAC + 32633110 32633119 9.0E-06 CGAATATGCA 10 V_ELF4_04_M02850 TRANSFAC + 32633084 32633100 7.0E-06 GGTAAATAAAAACCTGT 17 V_COMP1_01_M00057 TRANSFAC + 32633335 32633358 9.0E-06 GGAGATGTATGGCAGTAAACAGTT 24 V_SOX13_03_M02797 TRANSFAC - 32633407 32633422 4.0E-06 TAAAGAACTATTATAA 16 V_OCT1_02_M00136 TRANSFAC + 32633109 32633123 1.0E-06 TCGAATATGCATATT 15 V_OCT1_02_M00136 TRANSFAC - 32633112 32633126 6.0E-06 GCCAATATGCATATT 15 V_HOXA3_07_M02869 TRANSFAC - 32633407 32633420 4.0E-06 AAGAACTATTATAA 14 V_NKX22_02_M01372 TRANSFAC - 32633285 32633301 8.0E-06 GCAGGCACTTGAGAACA 17 V_SOX12_04_M02900 TRANSFAC - 32633414 32633429 6.0E-06 ACCAAGATAAAGAACT 16 V_XFD2_01_M00268 TRANSFAC - 32633361 32633374 6.0E-06 ATTGTAAATATGGG 14 V_TTF1_Q5_M02034 TRANSFAC - 32633286 32633299 1.0E-06 AGGCACTTGAGAAC 14 V_OCT2_01_M01368 TRANSFAC - 32633109 32633124 2.0E-06 CAATATGCATATTCGA 16 V_OCT2_01_M01368 TRANSFAC + 32633111 32633126 7.0E-06 GAATATGCATATTGGC 16 V_FOXL1_04_M02753 TRANSFAC - 32633360 32633376 8.0E-06 AGATTGTAAATATGGGG 17 V_NCX_01_M00484 TRANSFAC + 32633301 32633310 1.0E-05 CAGTAATTGG 10 V_MSX1_01_M00394 TRANSFAC + 32633301 32633309 7.0E-06 CAGTAATTG 9 V_SRF_Q5_01_M00922 TRANSFAC + 32633327 32633341 2.0E-06 CCAAGAAAGGAGATG 15 V_SRF_Q4_M00810 TRANSFAC + 32633326 32633343 1.0E-06 CCCAAGAAAGGAGATGTA 18 V_FOXO1_04_M01969 TRANSFAC + 32633085 32633104 1.0E-06 GTAAATAAAAACCTGTAGAA 20 V_HNF1A_01_M02162 TRANSFAC - 32633084 32633097 5.0E-06 GGTTTTTATTTACC 14 V_TCF3_05_M02920 TRANSFAC + 32633081 32633095 3.0E-06 GGCGGTAAATAAAAA 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.