Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

LYPD2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 137797 LY6/PLAUR domain containing 2 chr8 - 143833452 - 143838952 143833952 Transcription Factor Binding Sites   Download all TFBS in the LYPD2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Foxk1_forkhead_DBD_putatively-multimeric_11_1 SELEX + 143838809 143838819 9.0E-06 GAGACACAATC 11 RARB_nuclearreceptor_full_dimeric_16_1 SELEX + 143838677 143838692 0.0E+00 AAGTGTCAAAAGTTCA 16 CUX1_CUT_DBD_dimeric_17_1 SELEX + 143830081 143830097 2.0E-06 ATCAATCATAGATCAAG 17 RARA_nuclearreceptor_DBD_dimeric_18_2 SELEX + 143838678 143838695 2.0E-06 AGTGTCAAAAGTTCAGGC 18 PBX1_MA0070.1 JASPAR + 143830079 143830090 0.0E+00 ACATCAATCATA 12 NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX + 143838678 143838693 3.0E-06 AGTGTCAAAAGTTCAG 16 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX + 143838678 143838692 3.0E-06 AGTGTCAAAAGTTCA 15 ETV6_ETS_full_dimeric_15_1 SELEX + 143838667 143838681 8.0E-06 GGGGAAAAGGAAGTG 15 RARG_nuclearreceptor_full_dimeric_16_1 SELEX + 143838678 143838693 1.0E-06 AGTGTCAAAAGTTCAG 16 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 143837006 143837018 1.0E-05 CAAAACAGAAACA 13 RARA_nuclearreceptor_full_dimeric_15_1 SELEX + 143838678 143838692 0.0E+00 AGTGTCAAAAGTTCA 15 V_ZFX_01_M01593 TRANSFAC - 143838751 143838766 9.0E-06 CCCCAGGCCTCACTGG 16 V_ZTA_Q2_M00711 TRANSFAC - 143836998 143837010 6.0E-06 AAACAGTGACACA 13 V_ZTA_Q2_M00711 TRANSFAC - 143837081 143837093 8.0E-06 TGATTATGGCTCA 13 V_IRF_Q6_01_M00972 TRANSFAC - 143837007 143837017 5.0E-06 AAAACAGAAAC 11 V_HNF4ALPHA_Q6_M00638 TRANSFAC - 143838681 143838693 6.0E-06 CTGAACTTTTGAC 13 V_AP2_Q6_01_M00915 TRANSFAC - 143838758 143838770 0.0E+00 CAGCCCCCAGGCC 13 V_HIC1_03_M01073 TRANSFAC - 143838692 143838709 8.0E-06 GAAGGGTGCCCCAGGCCT 18 V_IRF_Q6_M00772 TRANSFAC + 143837003 143837017 5.0E-06 CACTGTTTCTGTTTT 15 V_LEF1_03_M02878 TRANSFAC + 143830077 143830092 5.0E-06 GGACATCAATCATAGA 16 V_ELF5_01_M01197 TRANSFAC + 143838671 143838681 6.0E-06 AAAAGGAAGTG 11 V_PBX1_01_M00096 TRANSFAC + 143830081 143830089 4.0E-06 ATCAATCAT 9 V_PNR_01_M01650 TRANSFAC + 143830082 143830095 9.0E-06 TCAATCATAGATCA 14 V_TAL1_01_M01591 TRANSFAC - 143838667 143838679 1.0E-05 CTTCCTTTTCCCC 13 V_TCF7L2_04_M02922 TRANSFAC + 143830077 143830092 7.0E-06 GGACATCAATCATAGA 16 V_PBX1_02_M00124 TRANSFAC + 143830078 143830092 1.0E-06 GACATCAATCATAGA 15 V_PBX1_03_M01017 TRANSFAC + 143830079 143830090 0.0E+00 ACATCAATCATA 12 V_IRF1_Q6_01_M01881 TRANSFAC + 143837005 143837018 8.0E-06 CTGTTTCTGTTTTG 14 V_ARP1_01_M00155 TRANSFAC - 143838677 143838692 0.0E+00 TGAACTTTTGACACTT 16 V_TCF11MAFG_01_M00284 TRANSFAC - 143836989 143837010 0.0E+00 AAACAGTGACACAGTAAGTGTG 22 V_PBX1_Q3_M02028 TRANSFAC + 143830081 143830089 9.0E-06 ATCAATCAT 9

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.