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CLVS2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 134829 clavesin 2 chr6 + 123312581 - 123318081 123317581 Transcription Factor Binding Sites   Download all TFBS in the CLVS2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NFE2_bZIP_DBD_dimeric_11_1 SELEX + 123318922 123318932 1.0E-06 AATGACTCATT 11 NFE2_bZIP_DBD_dimeric_11_1 SELEX - 123318922 123318932 2.0E-06 AATGAGTCATT 11 EVX2_homeodomain_DBD_monomeric_10_1 SELEX + 123317350 123317359 1.0E-05 GATAATTAGA 10 FOXJ2_forkhead_DBD_monomeric_8_1 SELEX + 123315661 123315668 5.0E-06 ATAAACAA 8 VSX2_homeodomain_DBD_monomeric_8_1 SELEX - 123317351 123317358 5.0E-06 CTAATTAT 8 DLX1_homeodomain_DBD_monomeric_10_1 SELEX - 123317350 123317359 6.0E-06 TCTAATTATC 10 ALX3_homeodomain_full_monomeric_10_1 SELEX - 123317350 123317359 6.0E-06 TCTAATTATC 10 TBX5_TBX_DBD_dimeric_20_1 SELEX + 123315736 123315755 7.0E-06 AGGAGAGAGATATCACAGCT 20 Alx1_homeodomain_DBD_monomeric_10_1 SELEX - 123317350 123317359 1.0E-05 TCTAATTATC 10 SOX9_HMG_DBD_monomeric_9_1 SELEX + 123315663 123315671 9.0E-06 AAACAATGG 9 Meis3_MEIS_DBD_dimeric_12_1 SELEX + 123315748 123315759 9.0E-06 TCACAGCTTTCA 12 Foxq1_MA0040.1 JASPAR - 123315660 123315670 2.0E-06 CATTGTTTATG 11 HOXD8_homeodomain_DBD_monomeric_10_1 SELEX + 123317350 123317359 7.0E-06 GATAATTAGA 10 SP1_MA0079.2 JASPAR + 123318037 123318046 3.0E-06 CCCCTCCCCC 10 SRY_MA0084.1 JASPAR + 123315661 123315669 5.0E-06 ATAAACAAT 9 RFX3_RFX_DBD_dimeric_15_1 SELEX - 123317859 123317873 3.0E-06 GGTCGCTAAGCAATG 15 SP1_C2H2_DBD_monomeric_11_1 SELEX - 123318106 123318116 7.0E-06 ACCCCACCCCC 11 JDP2_bZIP_full_dimeric_9_1 SELEX + 123318923 123318931 2.0E-06 ATGACTCAT 9 JDP2_bZIP_full_dimeric_9_1 SELEX - 123318923 123318931 4.0E-06 ATGAGTCAT 9 Myf_MA0055.1 JASPAR + 123317389 123317400 4.0E-06 CAGCAGCAGCAG 12 Myf_MA0055.1 JASPAR + 123318816 123318827 9.0E-06 AGGCAGCAGGAG 12 FOXI1_forkhead_full_dimeric_17_1 SELEX - 123315812 123315828 5.0E-06 ATTTGTACAGTAAATAG 17 SOX9_MA0077.1 JASPAR + 123315663 123315671 2.0E-06 AAACAATGG 9 Foxj3_forkhead_DBD_monomeric_8_1 SELEX + 123315661 123315668 5.0E-06 ATAAACAA 8 Sox2_MA0143.1 JASPAR - 123318912 123318926 1.0E-05 TCATTGTTCTGCCTA 15 RREB1_MA0073.1 JASPAR - 123318102 123318121 4.0E-06 CCCCAACCCCACCCCCAACT 20 V_AP1_Q2_M00173 TRANSFAC + 123318922 123318932 6.0E-06 AATGACTCATT 11 V_RHOX11_01_M01347 TRANSFAC - 123315673 123315689 2.0E-06 ATTCTGCTGTAATGCCA 17 V_COE1_Q6_M01871 TRANSFAC - 123315825 123315838 1.0E-06 TCTCAAGGGTATTT 14 V_SRY_02_M00160 TRANSFAC + 123315661 123315672 8.0E-06 ATAAACAATGGG 12 V_SP1_03_M02281 TRANSFAC + 123318037 123318046 3.0E-06 CCCCTCCCCC 10 V_FOXP3_01_M01599 TRANSFAC + 123315661 123315668 5.0E-06 ATAAACAA 8 V_RHOX11_02_M01384 TRANSFAC - 123315673 123315689 2.0E-06 ATTCTGCTGTAATGCCA 17 V_AP1_Q6_M00174 TRANSFAC + 123318922 123318932 0.0E+00 AATGACTCATT 11 V_BACH1_01_M00495 TRANSFAC - 123318920 123318934 2.0E-06 CAAATGAGTCATTGT 15 V_GC_01_M00255 TRANSFAC + 123318105 123318118 5.0E-06 TGGGGGTGGGGTTG 14 V_SOX7_03_M02807 TRANSFAC + 123318912 123318933 6.0E-06 TAGGCAGAACAATGACTCATTT 22 V_MYF_01_M01302 TRANSFAC + 123317389 123317400 4.0E-06 CAGCAGCAGCAG 12 V_MYF_01_M01302 TRANSFAC + 123318816 123318827 9.0E-06 AGGCAGCAGGAG 12 V_TEF_Q6_M00672 TRANSFAC - 123320288 123320299 4.0E-06 ATGTTTTAACAA 12 V_AP1_Q6_01_M00925 TRANSFAC + 123318923 123318931 4.0E-06 ATGACTCAT 9 V_AP1_Q4_M00188 TRANSFAC + 123318922 123318932 8.0E-06 AATGACTCATT 11 V_MAZ_Q6_01_M02023 TRANSFAC - 123318027 123318040 1.0E-06 GGGGGAGGGAGGGG 14 V_HMX1_01_M00433 TRANSFAC + 123318066 123318075 5.0E-06 CAAGTCCGTG 10 V_HIC1_05_M02763 TRANSFAC + 123317246 123317261 3.0E-06 TCGATGCCACCCAAAT 16 V_JUNDM2_04_M02876 TRANSFAC + 123318919 123318934 9.0E-06 AACAATGACTCATTTG 16 V_BBX_04_M02843 TRANSFAC + 123320285 123320301 1.0E-05 TGCTTGTTAAAACATTG 17 V_RREB1_01_M00257 TRANSFAC - 123318108 123318121 1.0E-06 CCCCAACCCCACCC 14 V_AP1_C_M00199 TRANSFAC - 123318923 123318931 8.0E-06 ATGAGTCAT 9 V_OCAB_Q6_M02113 TRANSFAC + 123315580 123315590 4.0E-06 ATCTGCATATC 11 V_HFH1_01_M00129 TRANSFAC - 123315659 123315670 5.0E-06 CATTGTTTATGC 12 V_GATA5_04_M02860 TRANSFAC + 123315738 123315754 3.0E-06 GAGAGAGATATCACAGC 17 V_SP1_01_M00008 TRANSFAC - 123317871 123317880 7.0E-06 GAGGCGGGGT 10 V_SOX9_B1_M00410 TRANSFAC + 123315660 123315673 1.0E-06 CATAAACAATGGGT 14 V_BLIMP1_Q6_M01066 TRANSFAC + 123317279 123317294 1.0E-06 GAGGCAGGGAAAGGAG 16 V_KAISO_01_M01119 TRANSFAC + 123317669 123317678 9.0E-06 CTCCTGCTAG 10 V_HFH8_01_M00294 TRANSFAC - 123315658 123315670 9.0E-06 CATTGTTTATGCC 13 V_AP1_Q4_01_M00926 TRANSFAC - 123318923 123318930 1.0E-05 TGAGTCAT 8 V_RHOX11_05_M03099 TRANSFAC - 123315673 123315689 2.0E-06 ATTCTGCTGTAATGCCA 17 V_FRA1_Q5_M01267 TRANSFAC - 123318923 123318930 1.0E-05 TGAGTCAT 8 V_ZFP281_01_M01597 TRANSFAC - 123318037 123318047 2.0E-06 GGGGGGAGGGG 11 V_ZFP281_01_M01597 TRANSFAC + 123318105 123318115 1.0E-06 TGGGGGTGGGG 11 V_OSR1_04_M02888 TRANSFAC + 123320253 123320268 5.0E-06 AAATGCTACCAGAGCT 16 V_CHX10_01_M00437 TRANSFAC + 123317349 123317362 7.0E-06 GGATAATTAGAGAG 14 V_SOX2_01_M02246 TRANSFAC - 123318912 123318926 1.0E-05 TCATTGTTCTGCCTA 15 V_ZFP281_04_M02831 TRANSFAC + 123318035 123318049 4.0E-06 TCCCCCTCCCCCCTT 15 V_FOXO1_01_M00473 TRANSFAC + 123315660 123315669 1.0E-06 CATAAACAAT 10 V_SOX2_Q6_M01272 TRANSFAC - 123318915 123318930 7.0E-06 TGAGTCATTGTTCTGC 16 V_UF1H3BETA_Q6_M01068 TRANSFAC + 123318103 123318116 5.0E-06 GTTGGGGGTGGGGT 14 V_PBX1_04_M01357 TRANSFAC + 123317016 123317032 9.0E-06 TTCTACATCAAAATTGC 17 V_RHOX11_06_M03100 TRANSFAC - 123315673 123315689 2.0E-06 ATTCTGCTGTAATGCCA 17 V_HOXA4_Q2_M00640 TRANSFAC + 123317351 123317358 5.0E-06 ATAATTAG 8

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.