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COX6A1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 1337 cytochrome c oxidase subunit VIa polypeptide 1 chr12 + 120870892 - 120876392 120875892 Transcription Factor Binding Sites   Download all TFBS in the COX6A1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR + 120877638 120877656 0.0E+00 TACCCACTAGGTGGCAGTA 19 Foxa2_MA0047.2 JASPAR + 120877558 120877569 7.0E-06 TGTTGACATTTG 12 GABPA_MA0062.2 JASPAR - 120875890 120875900 9.0E-06 GCGGAAGTGGA 11 GABPA_MA0062.2 JASPAR - 120875896 120875906 7.0E-06 CCGGAAGCGGA 11 YY1_C2H2_full_monomeric_11_1 SELEX - 120875927 120875937 3.0E-06 ACCGCCATTTT 11 SPIB_ETS_DBD_monomeric_14_1 SELEX - 120875892 120875905 9.0E-06 CGGAAGCGGAAGTG 14 SP1_MA0079.2 JASPAR + 120877684 120877693 3.0E-06 CCCCTCCCCC 10 SP1_MA0079.2 JASPAR + 120877690 120877699 7.0E-06 CCCCGCCCCC 10 SPDEF_ETS_full_putative-multimer_15_1 SELEX + 120875791 120875805 8.0E-06 GTCGTCCCGGATGAT 15 YY2_C2H2_full_monomeric_11_1 SELEX - 120875927 120875937 0.0E+00 ACCGCCATTTT 11 MZF1_5-13_MA0057.1 JASPAR - 120877681 120877690 4.0E-06 GGAGGGGGAA 10 Foxd3_MA0041.1 JASPAR - 120875461 120875472 9.0E-06 TATTATTATTTT 12 ETV6_ETS_full_monomeric_10_1 SELEX - 120875892 120875901 1.0E-06 AGCGGAAGTG 10 RUNX1_MA0002.2 JASPAR + 120876163 120876173 9.0E-06 GTTTGTGGCTT 11 ETV6_ETS_full_dimeric_15_1 SELEX - 120875892 120875906 0.0E+00 CCGGAAGCGGAAGTG 15 ETV6_ETS_full_dimeric_15_1 SELEX - 120877672 120877686 7.0E-06 GGGGAAGCGGGAGTG 15 NRF1_NRF_full_dimeric_12_1 SELEX + 120875695 120875706 1.0E-06 CACGCATGCGCA 12 NRF1_NRF_full_dimeric_12_1 SELEX - 120875695 120875706 2.0E-06 TGCGCATGCGTG 12 ELF5_MA0136.1 JASPAR + 120875848 120875856 9.0E-06 AACTTCCTT 9 V_NFAT_Q4_01_M00935 TRANSFAC - 120875885 120875894 0.0E+00 GTGGAAAATT 10 V_EVI1_05_M00082 TRANSFAC + 120875457 120875467 5.0E-06 AGACAAAATAA 11 V_SRY_07_M02813 TRANSFAC + 120875460 120875475 1.0E-06 CAAAATAATAATATAA 16 V_SRY_07_M02813 TRANSFAC - 120875460 120875475 2.0E-06 TTATATTATTATTTTG 16 V_SMAD3_Q6_01_M01888 TRANSFAC + 120875453 120875465 7.0E-06 AGACAGACAAAAT 13 V_FOXD3_01_M00130 TRANSFAC - 120875461 120875472 6.0E-06 TATTATTATTTT 12 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC - 120877557 120877568 4.0E-06 AAATGTCAACAG 12 V_GABP_B_M00341 TRANSFAC - 120875890 120875901 4.0E-06 AGCGGAAGTGGA 12 V_GABP_B_M00341 TRANSFAC - 120875896 120875907 8.0E-06 GCCGGAAGCGGA 12 V_HNF3_Q6_01_M01012 TRANSFAC - 120875454 120875471 8.0E-06 ATTATTATTTTGTCTGTC 18 V_SP1_03_M02281 TRANSFAC + 120877684 120877693 3.0E-06 CCCCTCCCCC 10 V_SP1_03_M02281 TRANSFAC + 120877690 120877699 7.0E-06 CCCCGCCCCC 10 V_AP4_Q6_02_M01860 TRANSFAC - 120875978 120875990 1.0E-06 CCAGCTGTGGGCG 13 V_PU1_Q4_M01172 TRANSFAC + 120875886 120875904 3.0E-06 ATTTTCCACTTCCGCTTCC 19 V_SOX21_03_M02803 TRANSFAC + 120875460 120875475 0.0E+00 CAAAATAATAATATAA 16 V_SOX21_03_M02803 TRANSFAC - 120875460 120875475 0.0E+00 TTATATTATTATTTTG 16 V_NFAT2_01_M01748 TRANSFAC - 120875886 120875894 8.0E-06 GTGGAAAAT 9 V_CEBPB_01_M00109 TRANSFAC + 120877604 120877617 1.0E-06 GCATTGTGAAATGT 14 V_CETS1P54_02_M00074 TRANSFAC - 120875847 120875859 3.0E-06 CCAAAGGAAGTTA 13 V_SPIC_01_M02042 TRANSFAC - 120875892 120875901 9.0E-06 AGCGGAAGTG 10 V_MTERF_01_M01245 TRANSFAC + 120875931 120875944 2.0E-06 TGGCGGTAGTTGGT 14 V_FOXA2_02_M02853 TRANSFAC + 120875463 120875477 1.0E-05 AATAATAATATAACG 15 V_ZFP105_03_M02827 TRANSFAC + 120875459 120875473 7.0E-06 ACAAAATAATAATAT 15 V_RUNX1_01_M02257 TRANSFAC + 120876163 120876173 9.0E-06 GTTTGTGGCTT 11 V_NFAT_Q6_M00302 TRANSFAC - 120875885 120875896 1.0E-06 AAGTGGAAAATT 12 V_KROX_Q6_M00982 TRANSFAC + 120877685 120877698 4.0E-06 CCCTCCCCCGCCCC 14 V_KROX_Q6_M00982 TRANSFAC + 120877691 120877704 7.0E-06 CCCGCCCCCATCAC 14 V_FOXK1_04_M02856 TRANSFAC + 120875461 120875475 2.0E-06 AAAATAATAATATAA 15 V_GADP_01_M01258 TRANSFAC + 120875892 120875903 5.0E-06 CACTTCCGCTTC 12 V_GADP_01_M01258 TRANSFAC + 120875898 120875909 5.0E-06 CGCTTCCGGCGC 12 V_YY1_Q6_02_M01035 TRANSFAC - 120875927 120875937 1.0E-06 ACCGCCATTTT 11 V_SOX12_04_M02900 TRANSFAC + 120875453 120875468 3.0E-06 AGACAGACAAAATAAT 16 V_CTCF_02_M01259 TRANSFAC + 120877635 120877654 0.0E+00 CTGTACCCACTAGGTGGCAG 20 V_CTCF_01_M01200 TRANSFAC + 120877637 120877656 1.0E-06 GTACCCACTAGGTGGCAGTA 20 V_MZF1_02_M00084 TRANSFAC - 120877681 120877693 1.0E-06 GGGGGAGGGGGAA 13 V_BLIMP1_Q6_M01066 TRANSFAC + 120876116 120876131 2.0E-06 GCGGGAGGGAAAGTGA 16 V_ISGF4G_04_M02875 TRANSFAC - 120877775 120877788 8.0E-06 GAAAAGCATTACTT 14 V_EVI1_06_M00011 TRANSFAC - 120877595 120877603 4.0E-06 ACAAGATAG 9 V_SP4_Q5_M01273 TRANSFAC + 120877689 120877699 5.0E-06 CCCCCGCCCCC 11 V_YY1_03_M02044 TRANSFAC - 120875926 120875937 2.0E-06 ACCGCCATTTTT 12 V_MTF1_06_M02882 TRANSFAC + 120875462 120875475 9.0E-06 AAATAATAATATAA 14 V_GABPBETA_Q3_M01876 TRANSFAC - 120875891 120875901 7.0E-06 AGCGGAAGTGG 11 V_ZSCAN4_04_M02942 TRANSFAC - 120875488 120875503 1.0E-06 CATAGCACATAACATT 16 V_ZFP206_01_M01742 TRANSFAC - 120875696 120875706 2.0E-06 TGCGCATGCGT 11 V_TCF4_Q5_M00671 TRANSFAC - 120877786 120877793 1.0E-05 CCTTTGAA 8 V_FOXA2_03_M02260 TRANSFAC + 120877558 120877569 7.0E-06 TGTTGACATTTG 12 V_NRF1_Q6_M00652 TRANSFAC + 120875697 120875706 2.0E-06 CGCATGCGCA 10 V_ZFP281_01_M01597 TRANSFAC - 120877684 120877694 7.0E-06 CGGGGGAGGGG 11 V_ZFP281_01_M01597 TRANSFAC - 120877690 120877700 6.0E-06 TGGGGGCGGGG 11 V_SOX8_03_M02808 TRANSFAC - 120875461 120875477 4.0E-06 CGTTATATTATTATTTT 17 V_ZFP281_04_M02831 TRANSFAC + 120877682 120877696 8.0E-06 TCCCCCTCCCCCGCC 15 V_ZFP281_04_M02831 TRANSFAC + 120877688 120877702 9.0E-06 TCCCCCGCCCCCATC 15 V_SMAD3_Q6_M00701 TRANSFAC - 120875453 120875461 3.0E-06 TGTCTGTCT 9 V_YY1_01_M00059 TRANSFAC - 120875922 120875938 2.0E-06 TACCGCCATTTTTGATC 17 V_FREAC4_01_M00292 TRANSFAC - 120877554 120877569 2.0E-06 CAAATGTCAACAGTGC 16 V_SP1_Q2_01_M00933 TRANSFAC + 120877690 120877699 4.0E-06 CCCCGCCCCC 10 V_UF1H3BETA_Q6_M01068 TRANSFAC - 120877683 120877696 1.0E-06 GGCGGGGGAGGGGG 14 V_ELF5_04_M02241 TRANSFAC + 120875848 120875856 9.0E-06 AACTTCCTT 9 V_ELK1_03_M01163 TRANSFAC - 120875892 120875902 1.0E-05 AAGCGGAAGTG 11 V_GLIS2_04_M02863 TRANSFAC + 120875463 120875476 5.0E-06 AATAATAATATAAC 14 V_SOX14_03_M02798 TRANSFAC + 120875460 120875475 1.0E-06 CAAAATAATAATATAA 16 V_SOX14_03_M02798 TRANSFAC - 120875460 120875475 1.0E-06 TTATATTATTATTTTG 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.