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TMEM42 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 131616 transmembrane protein 42 chr3 + 44898407 - 44903907 44903407 Transcription Factor Binding Sites   Download all TFBS in the TMEM42 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Sox17_MA0078.1 JASPAR + 44902856 44902864 7.0E-06 ATCATTGTC 9 EBF1_EBF_full_dimeric_14_1 SELEX + 44903292 44903305 5.0E-06 ATTCCCAAGGGGCC 14 Bhlhb2_bHLH_DBD_dimeric_10_1 SELEX - 44903336 44903345 9.0E-06 CTCACGTGAC 10 Tcfap2a_TFAP_DBD_dimeric_13_1 SELEX + 44903373 44903385 1.0E-06 TGCCCTGCGGGCA 13 Tcfap2a_TFAP_DBD_dimeric_13_1 SELEX - 44903373 44903385 2.0E-06 TGCCCGCAGGGCA 13 Pax4_MA0068.1 JASPAR + 44903935 44903964 5.0E-06 GAAGAACTACACCTCCTACATCCACCCTCT 30 TFAP2C_TFAP_full_dimeric_13_1 SELEX + 44903373 44903385 1.0E-06 TGCCCTGCGGGCA 13 TFAP2C_TFAP_full_dimeric_13_1 SELEX - 44903373 44903385 1.0E-06 TGCCCGCAGGGCA 13 Lhx8_homeodomain_DBD_dimeric_18_1 SELEX - 44902846 44902863 7.0E-06 ACAATGATCCATAATCAA 18 BHLHE41_bHLH_full_dimeric_10_1 SELEX + 44903336 44903345 7.0E-06 GTCACGTGAG 10 BHLHE41_bHLH_full_dimeric_10_1 SELEX - 44903336 44903345 7.0E-06 CTCACGTGAC 10 SREBF2_bHLH_DBD_dimeric_10_1 SELEX - 44903336 44903345 8.0E-06 CTCACGTGAC 10 SP1_MA0079.2 JASPAR - 44903670 44903679 9.0E-06 CCCCTCCTCC 10 Bhlhb2_bHLH_DBD_monomeric_10_1 SELEX - 44903336 44903345 5.0E-06 CTCACGTGAC 10 MEOX2_homeodomain_DBD_monomeric_10_1 SELEX + 44906984 44906993 7.0E-06 TGTAATTATT 10 Srebf1_bHLH_DBD_dimeric_10_1 SELEX - 44903336 44903345 8.0E-06 CTCACGTGAC 10 SOX15_HMG_full_dimeric_15_1 SELEX + 44900760 44900774 4.0E-06 CAGAAAAACATTGCT 15 TFAP2A_TFAP_DBD_dimeric_13_1 SELEX + 44903373 44903385 1.0E-06 TGCCCTGCGGGCA 13 TFAP2A_TFAP_DBD_dimeric_13_1 SELEX - 44903373 44903385 4.0E-06 TGCCCGCAGGGCA 13 FOXC2_forkhead_DBD_dimeric_14_1 SELEX + 44906984 44906997 7.0E-06 TGTAATTATTGTCC 14 FOXC2_forkhead_DBD_dimeric_14_1 SELEX - 44906984 44906997 6.0E-06 GGACAATAATTACA 14 TFAP2B_TFAP_DBD_dimeric_13_1 SELEX + 44903373 44903385 1.0E-06 TGCCCTGCGGGCA 13 TFAP2B_TFAP_DBD_dimeric_13_1 SELEX - 44903373 44903385 3.0E-06 TGCCCGCAGGGCA 13 JDP2_bZIP_full_dimeric_9_1 SELEX + 44899024 44899032 1.0E-05 ATGAGTCAC 9 TFE3_bHLH_DBD_dimeric_10_1 SELEX - 44903336 44903345 6.0E-06 CTCACGTGAC 10 Sox11_HMG_DBD_dimeric_15_1 SELEX - 44906979 44906993 8.0E-06 AATAATTACAGCGTG 15 ARNTL_bHLH_DBD_dimeric_10_1 SELEX + 44903336 44903345 6.0E-06 GTCACGTGAG 10 BHLHB3_bHLH_full_dimeric_10_1 SELEX - 44903336 44903345 2.0E-06 CTCACGTGAC 10 V_TGIF_01_M00418 TRANSFAC - 44907052 44907062 7.0E-06 AACTGTCAGAA 11 V_GEN_INI_B_M00315 TRANSFAC + 44902882 44902889 1.0E-05 CCTCATTT 8 V_YY1_02_M00069 TRANSFAC - 44903407 44903426 0.0E+00 TCTCGGCCATGTTGCCTGCT 20 V_NRSF_Q4_M01028 TRANSFAC + 44903621 44903639 0.0E+00 GCGCTGTTGGTGCTGCTGC 19 V_RHOX11_01_M01347 TRANSFAC + 44906977 44906993 8.0E-06 ACCACGCTGTAATTATT 17 V_NF1A_Q6_M02103 TRANSFAC + 44906992 44907007 1.0E-06 TTGTCCTGTTGCCAAA 16 V_DLX3_01_M01400 TRANSFAC + 44906980 44906996 7.0E-06 ACGCTGTAATTATTGTC 17 V_DLX3_01_M01400 TRANSFAC - 44906981 44906997 6.0E-06 GGACAATAATTACAGCG 17 V_EBOX_Q6_01_M01034 TRANSFAC + 44904004 44904013 4.0E-06 CCACGTGACT 10 V_PLAG1_02_M01973 TRANSFAC + 44903268 44903283 6.0E-06 CCCCCTCCGAGGCGCC 16 V_AP2_Q6_01_M00915 TRANSFAC + 44902990 44903002 6.0E-06 CGGTCCTCAGGCT 13 V_SP1_03_M02281 TRANSFAC - 44903670 44903679 9.0E-06 CCCCTCCTCC 10 V_SPZ1_01_M00446 TRANSFAC - 44903482 44903496 8.0E-06 TGCGGAGGGAATTCC 15 V_NKX61_03_M01489 TRANSFAC - 44906981 44906997 8.0E-06 GGACAATAATTACAGCG 17 V_PU1_Q4_M01172 TRANSFAC + 44902856 44902874 4.0E-06 ATCATTGTCTTCCTCTCAT 19 V_GM497_04_M02864 TRANSFAC - 44900698 44900713 7.0E-06 TCCAGCACACAAGAAC 16 V_BRN2_01_M00145 TRANSFAC + 44903068 44903083 6.0E-06 GGCATCTTTAATAAGT 16 V_TCFAP2E_04_M02926 TRANSFAC - 44902885 44902898 9.0E-06 AAACCGAAAAAATG 14 V_RHOX11_02_M01384 TRANSFAC + 44906977 44906993 5.0E-06 ACCACGCTGTAATTATT 17 V_SOX13_03_M02797 TRANSFAC - 44906986 44907001 3.0E-06 AACAGGACAATAATTA 16 V_CRX_Q4_M00623 TRANSFAC - 44902813 44902825 7.0E-06 CTTCTAATCTCCT 13 V_GEN_INI3_B_M00314 TRANSFAC + 44902882 44902889 1.0E-05 CCTCATTT 8 V_FKLF_Q5_M01837 TRANSFAC + 44903715 44903724 5.0E-06 GGGGTGGGCG 10 V_KROX_Q6_M00982 TRANSFAC - 44903709 44903722 2.0E-06 CCCACCCCCGCCCC 14 V_OLF1_01_M00261 TRANSFAC + 44903288 44903309 7.0E-06 AGCGATTCCCAAGGGGCCTGCC 22 V_AP2BETA_Q3_M01858 TRANSFAC + 44903764 44903779 8.0E-06 GCCCCGGGCCGCGGGC 16 V_JUNDM2_04_M02876 TRANSFAC + 44899020 44899035 1.0E-06 TGGGATGAGTCACAGA 16 V_NFE4_Q5_M02105 TRANSFAC + 44903738 44903749 8.0E-06 CACCCTCGCCGG 12 V_SP1SP3_Q4_M01219 TRANSFAC + 44903265 44903275 1.0E-06 CCGCCCCCTCC 11 V_SOX12_04_M02900 TRANSFAC - 44906953 44906968 5.0E-06 CCATACACAAAGCAGA 16 V_PNR_01_M01650 TRANSFAC + 44902815 44902828 2.0E-06 GAGATTAGAAGTCA 14 V_RFX_Q6_M00975 TRANSFAC + 44906997 44907005 4.0E-06 CTGTTGCCA 9 V_DLX7_01_M01486 TRANSFAC + 44906980 44906996 4.0E-06 ACGCTGTAATTATTGTC 17 V_YY1_03_M02044 TRANSFAC - 44903413 44903424 7.0E-06 TCGGCCATGTTG 12 V_HOXA7_02_M01336 TRANSFAC + 44906981 44906997 2.0E-06 CGCTGTAATTATTGTCC 17 V_STRA13_01_M00985 TRANSFAC + 44903334 44903347 4.0E-06 GCGTCACGTGAGGC 14 V_STRA13_01_M00985 TRANSFAC - 44903334 44903347 5.0E-06 GCCTCACGTGACGC 14 V_MYOD_Q6_01_M00929 TRANSFAC - 44903251 44903268 7.0E-06 GCGGGCCAGGTGGCAGAG 18 V_ZSCAN4_04_M02942 TRANSFAC - 44900698 44900713 2.0E-06 TCCAGCACACAAGAAC 16 V_MYOGNF1_01_M00056 TRANSFAC + 44898984 44899012 1.0E-06 CAGCCCTGCACTTTGGCTGTGTGTAATGA 29 V_DELTAEF1_01_M00073 TRANSFAC - 44904015 44904025 1.0E-06 TCTCACCTTAA 11 V_GEN_INI2_B_M00313 TRANSFAC + 44902882 44902889 1.0E-05 CCTCATTT 8 V_RHOX11_05_M03099 TRANSFAC + 44906977 44906993 5.0E-06 ACCACGCTGTAATTATT 17 V_MYB_Q3_M00773 TRANSFAC - 44903539 44903549 9.0E-06 ACAGACAGTTG 11 V_ASCL2_04_M02841 TRANSFAC - 44899012 44899027 6.0E-06 TCATCCCAACCCTTTT 16 V_SOX8_03_M02808 TRANSFAC + 44906985 44907001 4.0E-06 GTAATTATTGTCCTGTT 17 V_DLX3_02_M02051 TRANSFAC - 44906985 44906992 5.0E-06 ATAATTAC 8 V_IRF1_01_M00062 TRANSFAC - 44902888 44902900 3.0E-06 GAAAACCGAAAAA 13 V_UF1H3BETA_Q6_M01068 TRANSFAC + 44903667 44903680 2.0E-06 GGCGGAGGAGGGGC 14 V_BRN3C_01_M01408 TRANSFAC - 44903068 44903083 5.0E-06 ACTTATTAAAGATGCC 16 V_DLX1_01_M01439 TRANSFAC + 44906980 44906993 9.0E-06 ACGCTGTAATTATT 14 V_RNF96_01_M01199 TRANSFAC - 44903770 44903779 7.0E-06 GCCCGCGGCC 10 V_RHOX11_06_M03100 TRANSFAC + 44906977 44906993 8.0E-06 ACCACGCTGTAATTATT 17 V_HOXC8_01_M01321 TRANSFAC + 44906980 44906995 6.0E-06 ACGCTGTAATTATTGT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.