Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

LRRC15 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 131578 leucine rich repeat containing 15 chr3 - 194089972 - 194095472 194090472 Transcription Factor Binding Sites   Download all TFBS in the LRRC15 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HSF2_HSF_DBD_trimeric_13_1 SELEX + 194085545 194085557 9.0E-06 TTCCAGCACTTTC 13 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX - 194086198 194086207 9.0E-06 GTCATTAAAA 10 EVX2_homeodomain_DBD_monomeric_10_1 SELEX + 194086082 194086091 1.0E-05 CGTAATTAGC 10 Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX - 194086198 194086207 5.0E-06 GTCATTAAAA 10 HES5_bHLH_DBD_dimeric_12_1 SELEX + 194089380 194089391 8.0E-06 TGGCACGTGGCA 12 HES5_bHLH_DBD_dimeric_12_1 SELEX - 194089380 194089391 5.0E-06 TGCCACGTGCCA 12 Creb3l2_bZIP_DBD_dimeric_12_1 SELEX + 194089380 194089391 6.0E-06 TGGCACGTGGCA 12 VSX2_homeodomain_DBD_monomeric_8_1 SELEX + 194085815 194085822 5.0E-06 CTAATTAT 8 DLX1_homeodomain_DBD_monomeric_10_1 SELEX + 194085814 194085823 8.0E-06 CCTAATTATA 10 HOXA10_homeodomain_DBD_monomeric_12_1 SELEX - 194086197 194086208 4.0E-06 TGTCATTAAAAT 12 PKNOX1_MEIS_DBD_dimeric_12_1 SELEX + 194085781 194085792 8.0E-06 TGACAGATGGCA 12 NFKB1_MA0105.1 JASPAR - 194089881 194089891 3.0E-06 GGGGGTTTCCC 11 STAT1_MA0137.2 JASPAR - 194086171 194086185 2.0E-06 TCCTTCCAGGAAACC 15 Pknox2_MEIS_DBD_dimeric_12_1 SELEX + 194085781 194085792 8.0E-06 TGACAGATGGCA 12 Pknox2_MEIS_DBD_dimeric_12_1 SELEX - 194085781 194085792 9.0E-06 TGCCATCTGTCA 12 TGIF2_MEIS_DBD_dimeric_12_1 SELEX + 194085781 194085792 6.0E-06 TGACAGATGGCA 12 ZNF238_C2H2_full_monomeric_13_1 SELEX - 194085497 194085509 8.0E-06 TTTGCAGATGTGA 13 ZNF238_C2H2_full_monomeric_13_1 SELEX + 194089240 194089252 2.0E-06 ACTCCAGATGTTC 13 ZIC4_C2H2_DBD_monomeric_15_1 SELEX + 194090782 194090796 5.0E-06 GACCCCCTGCTGCCC 15 RARG_nuclearreceptor_full_dimeric_18_1 SELEX - 194089095 194089112 7.0E-06 CAGGTCATGGAAGGTTCT 18 Hoxc10_homeodomain_DBD_monomeric_10_1 SELEX - 194086198 194086207 2.0E-06 GTCATTAAAA 10 HES7_bHLH_DBD_dimeric_12_1 SELEX + 194089380 194089391 7.0E-06 TGGCACGTGGCA 12 HES7_bHLH_DBD_dimeric_12_1 SELEX - 194089380 194089391 3.0E-06 TGCCACGTGCCA 12 RELA_MA0107.1 JASPAR - 194089882 194089891 9.0E-06 GGGGGTTTCC 10 Rarb_nuclearreceptor_DBD_dimeric_17_1 SELEX - 194089095 194089111 5.0E-06 AGGTCATGGAAGGTTCT 17 HSF4_HSF_DBD_trimeric_13_1 SELEX + 194085545 194085557 7.0E-06 TTCCAGCACTTTC 13 FOXB1_forkhead_DBD_putative-multimer_14_1 SELEX + 194086201 194086214 1.0E-06 TAATGACACAGAGC 14 ZIC3_C2H2_full_monomeric_15_1 SELEX + 194090782 194090796 8.0E-06 GACCCCCTGCTGCCC 15 HOXC11_homeodomain_DBD_monomeric_11_1 SELEX - 194086198 194086208 5.0E-06 TGTCATTAAAA 11 POU3F1_POU_DBD_monomeric_12_1 SELEX + 194086195 194086206 6.0E-06 TTATTTTAATGA 12 Stat3_MA0144.1 JASPAR - 194086173 194086182 1.0E-06 TTCCAGGAAA 10 Stat3_MA0144.1 JASPAR + 194086174 194086183 2.0E-06 TTCCTGGAAG 10 Hoxa11_homeodomain_DBD_monomeric_12_1 SELEX - 194086197 194086208 6.0E-06 TGTCATTAAAAT 12 TGIF2LX_MEIS_full_dimeric_12_1 SELEX + 194085781 194085792 4.0E-06 TGACAGATGGCA 12 TGIF2LX_MEIS_full_dimeric_12_1 SELEX - 194085781 194085792 5.0E-06 TGCCATCTGTCA 12 POU6F2_POU_full_monomeric_10_1 SELEX + 194085814 194085823 8.0E-06 CCTAATTATA 10 ZNF282_C2H2_DBD_monomeric_17_1 SELEX + 194086155 194086171 2.0E-06 CATTCCCTGAACACGAG 17 CREB3L1_bZIP_full_dimeric_12_1 SELEX + 194089380 194089391 4.0E-06 TGGCACGTGGCA 12 CREB3L1_bZIP_full_dimeric_12_1 SELEX - 194089380 194089391 4.0E-06 TGCCACGTGCCA 12 Meis2_MEIS_DBD_dimeric_12_1 SELEX + 194085781 194085792 1.0E-05 TGACAGATGGCA 12 HOXC10_homeodomain_DBD_monomeric_10_3 SELEX - 194086198 194086207 4.0E-06 GTCATTAAAA 10 POU3F2_POU_DBD_monomeric_12_1 SELEX + 194086195 194086206 8.0E-06 TTATTTTAATGA 12 TGIF1_MEIS_DBD_dimeric_12_1 SELEX + 194085781 194085792 7.0E-06 TGACAGATGGCA 12 TGIF1_MEIS_DBD_dimeric_12_1 SELEX - 194085781 194085792 6.0E-06 TGCCATCTGTCA 12 RREB1_MA0073.1 JASPAR - 194086102 194086121 4.0E-06 CCACCAACCAACAAAGCCCA 20 RREB1_MA0073.1 JASPAR - 194086106 194086125 2.0E-06 CAACCCACCAACCAACAAAG 20 RREB1_MA0073.1 JASPAR - 194086109 194086128 2.0E-06 TCCCAACCCACCAACCAACA 20 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX - 194086198 194086208 9.0E-06 TGTCATTAAAA 11 ZIC1_C2H2_full_monomeric_14_1 SELEX + 194090782 194090795 5.0E-06 GACCCCCTGCTGCC 14 V_NFAT_Q4_01_M00935 TRANSFAC - 194085476 194085485 9.0E-06 GAGGAAAATC 10 V_HOXA9_01_M01351 TRANSFAC - 194086194 194086210 4.0E-06 TGTGTCATTAAAATAAG 17 V_HOXA9_01_M01351 TRANSFAC + 194088884 194088900 6.0E-06 CAGGCCATAAATCTGAA 17 RXR_RAR_DR5_MA0159.1 JASPAR - 194089095 194089111 5.0E-06 AGGTCATGGAAGGTTCT 17 V_AP1_Q2_M00173 TRANSFAC + 194085864 194085874 0.0E+00 AGTGACTCAGT 11 V_XVENT1_01_M00445 TRANSFAC - 194089210 194089222 4.0E-06 GCCCAATTTGCCT 13 V_TCFE2A_04_M02927 TRANSFAC + 194089239 194089255 7.0E-06 TACTCCAGATGTTCAGT 17 V_BACH2_01_M00490 TRANSFAC - 194086063 194086073 7.0E-06 CGTGAGTCACG 11 V_SOX40_04_M02908 TRANSFAC - 194086193 194086208 7.0E-06 TGTCATTAAAATAAGG 16 V_MAFK_03_M02776 TRANSFAC + 194085466 194085480 8.0E-06 AGAATTTGCAGATTT 9 TAL1_TCF3_MA0091.1 JASPAR - 194089242 194089253 9.0E-06 TGAACATCTGGA 12 V_NKX29_01_M01352 TRANSFAC - 194089282 194089298 9.0E-06 TTAGAAGTGCTCTAACG 17 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC + 194089235 194089246 6.0E-06 AATTTACTCCAG 12 V_RELBP52_01_M01239 TRANSFAC - 194089882 194089891 3.0E-06 GGGGGTTTCC 10 V_MAFB_03_M02879 TRANSFAC + 194085458 194085472 7.0E-06 ATATTGCAAGAATTT 1 V_NFAT3_Q3_M01734 TRANSFAC + 194085475 194085484 3.0E-06 AGATTTTCCT 10 V_RP58_01_M00532 TRANSFAC - 194089242 194089253 0.0E+00 TGAACATCTGGA 12 V_POU3F2_02_M00464 TRANSFAC + 194086195 194086204 2.0E-06 TTATTTTAAT 10 V_ATF3_Q6_01_M01863 TRANSFAC + 194085931 194085941 6.0E-06 ATGAAGTCAGC 11 V_AIRE_02_M01000 TRANSFAC - 194085802 194085826 1.0E-06 AGTTATAATTAGGGCAGCTTTGTGG 25 V_ZFP281_05_M02935 TRANSFAC + 194089881 194089897 2.0E-06 GGGAAACCCCCATGAAG 17 V_AP1_Q6_M00174 TRANSFAC + 194085864 194085874 3.0E-06 AGTGACTCAGT 11 V_BACH1_01_M00495 TRANSFAC - 194086061 194086075 7.0E-06 CTCGTGAGTCACGGT 15 V_ZNF219_01_M01122 TRANSFAC + 194088995 194089006 1.0E-05 CTCCCCCACCCC 12 V_GC_01_M00255 TRANSFAC - 194088989 194089002 4.0E-06 TGGGGGAGGAGCTG 14 V_IPF1_Q4_M00436 TRANSFAC + 194086197 194086208 1.0E-06 ATTTTAATGACA 12 V_NFAT_Q6_M00302 TRANSFAC - 194085476 194085487 2.0E-06 CAGAGGAAAATC 12 V_E2F1_01_M01250 TRANSFAC + 194090852 194090859 1.0E-05 CGTTTCTT 8 V_ZBP89_Q4_M01816 TRANSFAC + 194088993 194089002 2.0E-06 TCCTCCCCCA 10 V_AP1_Q4_M00188 TRANSFAC + 194085864 194085874 0.0E+00 AGTGACTCAGT 11 V_CDX2_01_M01449 TRANSFAC + 194088883 194088898 5.0E-06 ACAGGCCATAAATCTG 16 V_MAZ_Q6_01_M02023 TRANSFAC + 194085632 194085645 3.0E-06 AGGGGAGGGAGGGG 14 V_OCT1_05_M00161 TRANSFAC + 194085466 194085479 1.0E-05 AGAATTTGCAGATT 8 V_NFE4_Q5_M02105 TRANSFAC - 194085631 194085642 9.0E-06 CTCCCTCCCCTG 12 V_REST_01_M01256 TRANSFAC + 194085969 194085990 4.0E-06 CCTGACAGCTCTCCTGGGCGCT 22 V_OCAB_Q6_M02113 TRANSFAC + 194085501 194085511 7.0E-06 ATCTGCAAAGC 11 V_MEF2_Q6_01_M00941 TRANSFAC - 194085815 194085826 9.0E-06 AGTTATAATTAG 12 V_MAFK_Q3_M02022 TRANSFAC - 194089192 194089202 9.0E-06 TGAGTCAGCTG 11 V_STAT4_Q5_M02117 TRANSFAC - 194086173 194086182 7.0E-06 TTCCAGGAAA 10 V_LMO2COM_01_M00277 TRANSFAC - 194085730 194085741 2.0E-06 CTCCAGGTGCTG 12 V_STAT3_03_M01595 TRANSFAC - 194086169 194086184 8.0E-06 CCTTCCAGGAAACCTC 16 V_STAT3_03_M01595 TRANSFAC + 194086172 194086187 6.0E-06 GTTTCCTGGAAGGAGA 16 V_ZFP691_04_M02937 TRANSFAC + 194086181 194086197 4.0E-06 AAGGAGACTCCTCCTTA 17 V_BCL6B_04_M02844 TRANSFAC + 194088996 194089011 8.0E-06 TCCCCCACCCCTTATT 16 V_ELF1_Q6_M00746 TRANSFAC - 194085535 194085546 9.0E-06 AAAACAGGAAAC 12 V_ZIC2_05_M02940 TRANSFAC + 194085679 194085693 3.0E-06 ATTCTCAGCATGTGA 15 V_MYOD_Q6_02_M02100 TRANSFAC - 194085661 194085669 4.0E-06 CAGCTGTCA 9 V_T3R_01_M00239 TRANSFAC - 194089101 194089116 5.0E-06 CAGTCAGGTCATGGAA 16 V_AP3_Q6_M00690 TRANSFAC + 194089294 194089301 5.0E-06 TCTAAATT 8 V_IPF1_05_M01255 TRANSFAC - 194086197 194086208 3.0E-06 TGTCATTAAAAT 12 V_AP1FJ_Q2_M00172 TRANSFAC + 194085864 194085874 0.0E+00 AGTGACTCAGT 11 V_ZBTB3_03_M02825 TRANSFAC - 194090563 194090579 6.0E-06 GCAGGCACTGCACTGTG 17 V_E2F6_01_M01252 TRANSFAC + 194090852 194090859 1.0E-05 CGTTTCTT 8 V_GFI1B_01_M01058 TRANSFAC + 194085853 194085864 5.0E-06 TCAATCACTTCA 12 V_RSRFC4_01_M00026 TRANSFAC + 194085812 194085827 6.0E-06 GCCCTAATTATAACTT 16 V_ZFP281_01_M01597 TRANSFAC - 194088992 194089002 9.0E-06 TGGGGGAGGAG 11 V_MEF3_B_M00319 TRANSFAC + 194088919 194088931 5.0E-06 TGGTCAGGATTCA 13 V_HSF_Q6_M00641 TRANSFAC + 194085545 194085557 6.0E-06 TTCCAGCACTTTC 13 V_RXR_RAR_01_M02272 TRANSFAC - 194089095 194089111 5.0E-06 AGGTCATGGAAGGTTCT 17 V_HSF2_02_M01244 TRANSFAC - 194085545 194085557 1.0E-05 GAAAGTGCTGGAA 13 V_IPF1_Q4_01_M01013 TRANSFAC - 194086196 194086210 1.0E-06 TGTGTCATTAAAATA 15 V_NFE2_01_M00037 TRANSFAC + 194089193 194089203 9.0E-06 AGCTGACTCAA 11 V_ARP1_01_M00155 TRANSFAC - 194090447 194090462 3.0E-06 TGCAGCCTTGAGCCGT 16 V_MEF2A_05_M01301 TRANSFAC - 194085815 194085826 2.0E-06 AGTTATAATTAG 12 V_UF1H3BETA_Q6_M01068 TRANSFAC - 194088991 194089004 1.0E-06 GGTGGGGGAGGAGC 14 V_CP2_01_M00072 TRANSFAC + 194086021 194086031 9.0E-06 GCACGAACCAG 11 V_HOXA10_01_M01464 TRANSFAC - 194086195 194086210 2.0E-06 TGTGTCATTAAAATAA 16 V_VMYB_02_M00227 TRANSFAC - 194089280 194089288 1.0E-05 TCTAACGGC 9 V_IPF1_03_M01235 TRANSFAC - 194086083 194086092 7.0E-06 GGCTAATTAC 10 V_STAT1_Q6_M01823 TRANSFAC - 194086173 194086182 2.0E-06 TTCCAGGAAA 10 V_OTX1_01_M01366 TRANSFAC - 194085485 194085501 7.0E-06 TGTGAGGATTTATACAG 17 V_STAT1_05_M01260 TRANSFAC + 194086171 194086192 4.0E-06 GGTTTCCTGGAAGGAGACTCCT 22 V_GBX1_01_M01371 TRANSFAC - 194085811 194085827 7.0E-06 AAGTTATAATTAGGGCA 17 V_HOXA4_Q2_M00640 TRANSFAC - 194085815 194085822 5.0E-06 ATAATTAG 8 V_PAX4_04_M00380 TRANSFAC + 194087111 194087140 2.0E-06 AAAAATCAGAATCTCTGGAGACTCCACCCG 30 V_HOXC9_01_M01416 TRANSFAC - 194086196 194086211 5.0E-06 CTGTGTCATTAAAATA 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.