Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

FAM3D


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
131177 family with sequence similarity 3, member D chr3 -58652061 - 58657561 58652561

Transcription Factor Binding Sites

 
Download all TFBS in the FAM3D promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
HSF2_HSF_DBD_trimeric_13_1 SELEX - 58651312 58651324 1.0E-06 TTCTAGATGATTC 13
HSF1_HSF_full_trimeric_13_1 SELEX - 58651312 58651324 2.0E-06 TTCTAGATGATTC 13
EBF1_EBF_full_dimeric_14_1 SELEX - 58651138 58651151 9.0E-06 TCTCCCAAGAGAAT 14
Foxj3_forkhead_DBD_putatively-multimeric_11_1 SELEX - 58651271 58651281 4.0E-06 AAAGACACAAT 11
SPIB_ETS_DBD_monomeric_14_1 SELEX + 58652605 58652618 6.0E-06 GGAAGGAGGAAGTT 14
ZNF524_C2H2_full_dimeric_12_1 SELEX + 58651329 58651340 9.0E-06 ACTCTTGTACCC 12
HSF4_HSF_DBD_trimeric_13_1 SELEX - 58651312 58651324 1.0E-06 TTCTAGATGATTC 13
SRY_MA0084.1 JASPAR + 58652589 58652597 1.0E-06 TTAAACAAT 9
FEV_MA0156.1 JASPAR + 58652639 58652646 1.0E-05 CAGGAAAT 8
SPI1_ETS_full_monomeric_14_1 SELEX + 58652605 58652618 7.0E-06 GGAAGGAGGAAGTT 14
RORA_2_MA0072.1 JASPAR - 58651287 58651300 1.0E-06 ATTAATTGGGTCAG 14
V_FOXP1_01_M00987 TRANSFAC + 58651265 58651284 8.0E-06 TTAATCATTGTGTCTTTTTT 20
RXR_RAR_DR5_MA0159.1 JASPAR - 58652571 58652587 5.0E-06 AGGGCAGGGAGAGTTGA 17
V_AREB6_01_M00412 TRANSFAC + 58651280 58651292 6.0E-06 TTTTTACCTGACC 13
V_SIX6_02_M01398 TRANSFAC - 58651245 58651261 0.0E+00 GATGAGGTATCATACAT 17
V_ETS_B_M00340 TRANSFAC + 58652637 58652650 1.0E-06 GGCAGGAAATGAGT 14
V_LBX2_01_M01401 TRANSFAC - 58651287 58651303 7.0E-06 AGCATTAATTGGGTCAG 17
V_HFH4_01_M00742 TRANSFAC - 58652590 58652602 6.0E-06 GTGAGATTGTTTA 13
V_NERF_Q2_M00531 TRANSFAC - 58651343 58651360 9.0E-06 TGGCTGGAAGTGGGCTGC 18
V_AFP1_Q6_M00616 TRANSFAC - 58651259 58651269 6.0E-06 ATTAACAAGAT 11
V_PU1_Q4_M01172 TRANSFAC - 58652606 58652624 6.0E-06 AGAATAAACTTCCTCCTTC 19
V_ETS_Q4_M00771 TRANSFAC - 58652639 58652650 4.0E-06 ACTCATTTCCTG 12
V_SPI1_03_M02078 TRANSFAC + 58652556 58652565 6.0E-06 TGAGGAAGTT 10
V_SIX1_01_M01313 TRANSFAC - 58651245 58651261 0.0E+00 GATGAGGTATCATACAT 17
V_HNF1_Q6_M00790 TRANSFAC + 58651262 58651279 9.0E-06 TTGTTAATCATTGTGTCT 18
V_OLF1_01_M00261 TRANSFAC - 58651134 58651155 6.0E-06 GACTTCTCCCAAGAGAATGCCG 22
V_SIX3_01_M01358 TRANSFAC - 58651245 58651261 1.0E-06 GATGAGGTATCATACAT 17
V_AP2BETA_Q3_M01858 TRANSFAC + 58652689 58652704 2.0E-06 GCTGGGGCCTGGGGAG 16
V_HNF1_Q6_01_M01011 TRANSFAC - 58651260 58651280 7.0E-06 AAGACACAATGATTAACAAGA 21
V_PAX5_01_M00143 TRANSFAC + 58651366 58651393 3.0E-06 TCAGAATCCACTGCAGTGTAGAGTCAGT 28
V_RAX_01_M01389 TRANSFAC - 58651287 58651303 7.0E-06 AGCATTAATTGGGTCAG 17
V_SIX2_01_M01433 TRANSFAC - 58651245 58651261 1.0E-06 GATGAGGTATCATACAT 17
V_ELF1_Q6_M00746 TRANSFAC + 58652606 58652617 7.0E-06 GAAGGAGGAAGT 12
V_GABPBETA_Q3_M01876 TRANSFAC - 58652720 58652730 5.0E-06 ACAGGAAGGGA 11
V_ZBTB3_03_M02825 TRANSFAC + 58651369 58651385 7.0E-06 GAATCCACTGCAGTGTA 17
V_NANOG_01_M01123 TRANSFAC - 58652641 58652652 8.0E-06 AGACTCATTTCC 12
V_ZBTB12_04_M02928 TRANSFAC + 58651232 58651246 5.0E-06 TCTGGTTAGAACCAT 15
V_DMRT7_01_M01151 TRANSFAC - 58652591 58652604 7.0E-06 TTGTGAGATTGTTT 14
V_ASCL2_04_M02841 TRANSFAC + 58652575 58652590 8.0E-06 CTCTCCCTGCCCTGTT 16
V_SPIC_02_M02077 TRANSFAC + 58652556 58652565 3.0E-06 TGAGGAAGTT 10
V_SIX4_01_M01374 TRANSFAC + 58651245 58651261 3.0E-06 ATGTATGATACCTCATC 17
V_RXR_RAR_01_M02272 TRANSFAC - 58652571 58652587 5.0E-06 AGGGCAGGGAGAGTTGA 17
V_HSF2_02_M01244 TRANSFAC + 58651312 58651324 4.0E-06 GAATCATCTAGAA 13
V_SIX6_01_M01345 TRANSFAC - 58651245 58651261 1.0E-06 GATGAGGTATCATACAT 17
V_HNF1A_Q5_M02013 TRANSFAC + 58651263 58651273 1.0E-06 TGTTAATCATT 11
V_FEV_01_M02269 TRANSFAC + 58652639 58652646 1.0E-05 CAGGAAAT 8
V_RORA2_01_M00157 TRANSFAC - 58651287 58651299 2.0E-06 TTAATTGGGTCAG 13
V_SPIB_03_M02076 TRANSFAC + 58652556 58652565 2.0E-06 TGAGGAAGTT 10
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL