Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

CPNE4


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
131034 copine IV chr3 -131753344 - 131758844 131753844

Transcription Factor Binding Sites

 
Download all TFBS in the CPNE4 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
TBX20_TBX_full_monomeric_11_1 SELEX + 131757048 131757058 3.0E-06 GAGGTGTGATG 11
CTCF_MA0139.1 JASPAR - 131753912 131753930 6.0E-06 CAACCCCCAGGGGGCGCTC 19
CTCF_MA0139.1 JASPAR + 131757270 131757288 4.0E-06 CTACCAATAGGTGGCATCA 19
TBX1_TBX_DBD_dimeric_20_2 SELEX - 131756612 131756631 1.0E-06 GTCACACTGATGGGTGAGAT 20
HOXC13_homeodomain_DBD_monomeric_11_1 SELEX - 131757186 131757196 2.0E-06 TCTCATAAAAA 11
SPIC_ETS_full_monomeric_14_1 SELEX + 131750971 131750984 1.0E-06 ATAAACAGGAAGTC 14
SPIC_ETS_full_monomeric_14_1 SELEX + 131756660 131756673 8.0E-06 ACAAAAGGGAAGAA 14
MEF2D_MADS_DBD_dimeric_12_1 SELEX + 131756952 131756963 3.0E-06 GCTATTTATAGC 12
MEF2D_MADS_DBD_dimeric_12_1 SELEX - 131756952 131756963 0.0E+00 GCTATAAATAGC 12
HOXD13_homeodomain_DBD_monomeric_11_1 SELEX - 131757186 131757196 2.0E-06 TCTCATAAAAA 11
TBP_MA0108.2 JASPAR - 131756948 131756962 1.0E-06 CTATAAATAGCCCTG 15
SOX8_HMG_full_dimeric_17_1 SELEX - 131756685 131756701 2.0E-06 TATCAACTGCATTGGTA 17
GATA5_GATA_DBD_monomeric_8_1 SELEX + 131756565 131756572 7.0E-06 AGATAAGA 8
MEF2A_MADS_DBD_dimeric_12_1 SELEX + 131756952 131756963 5.0E-06 GCTATTTATAGC 12
MEF2A_MADS_DBD_dimeric_12_1 SELEX - 131756952 131756963 0.0E+00 GCTATAAATAGC 12
GATA4_GATA_DBD_monomeric_8_1 SELEX + 131756565 131756572 7.0E-06 AGATAAGA 8
ZIC4_C2H2_DBD_monomeric_15_1 SELEX + 131757203 131757217 6.0E-06 TACCACCTGTGGTGC 15
SPIB_ETS_DBD_monomeric_14_1 SELEX + 131750971 131750984 3.0E-06 ATAAACAGGAAGTC 14
MEF2B_MADS_full_dimeric_12_1 SELEX + 131756952 131756963 2.0E-06 GCTATTTATAGC 12
MEF2B_MADS_full_dimeric_12_1 SELEX - 131756952 131756963 0.0E+00 GCTATAAATAGC 12
EOMES_TBX_DBD_monomeric_13_1 SELEX + 131757048 131757060 9.0E-06 GAGGTGTGATGTA 13
Hoxc10_homeodomain_DBD_monomeric_10_1 SELEX - 131757186 131757195 5.0E-06 CTCATAAAAA 10
Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 131756101 131756111 7.0E-06 AGAAACAAACA 11
MEF2A_MA0052.1 JASPAR + 131756953 131756962 0.0E+00 CTATTTATAG 10
MEF2A_MA0052.1 JASPAR - 131756953 131756962 6.0E-06 CTATAAATAG 10
HOXD13_homeodomain_DBD_monomeric_10_1 SELEX - 131757186 131757195 3.0E-06 CTCATAAAAA 10
FOXI1_MA0042.1 JASPAR - 131756032 131756043 8.0E-06 TTGTGTTTAGTT 12
NFIX_NFI_full_monomeric_9_2 SELEX + 131756594 131756602 8.0E-06 TATGCCAAT 9
BCL6B_C2H2_DBD_monomeric_17_1 SELEX - 131756635 131756651 5.0E-06 TTCATTCCAGGATTTCA 17
BCL6B_C2H2_DBD_monomeric_17_1 SELEX - 131757057 131757073 1.0E-06 TGCTTTCCAGTAATACA 17
CTCF_C2H2_full_monomeric_17_1 SELEX - 131757271 131757287 2.0E-06 GATGCCACCTATTGGTA 17
GATA3_GATA_full_monomeric_8_1 SELEX + 131756565 131756572 7.0E-06 AGATAAGA 8
HOXA13_homeodomain_full_monomeric_10_1 SELEX - 131757186 131757195 5.0E-06 CTCATAAAAA 10
TBX21_TBX_full_monomeric_10_1 SELEX + 131757048 131757057 6.0E-06 GAGGTGTGAT 10
Evi1_MA0029.1 JASPAR + 131756559 131756572 0.0E+00 TTGATAAGATAAGA 14
HOXB13_homeodomain_DBD_monomeric_11_1 SELEX - 131757186 131757196 2.0E-06 TCTCATAAAAA 11
SPDEF_ETS_full_putative-multimer_16_1 SELEX - 131757258 131757273 9.0E-06 GTAGACAGAAGTATAA 16
HOXA13_homeodomain_full_monomeric_11_1 SELEX - 131757186 131757196 1.0E-06 TCTCATAAAAA 11
HOXC10_homeodomain_DBD_monomeric_10_3 SELEX - 131757186 131757195 8.0E-06 CTCATAAAAA 10
HOXC13_homeodomain_DBD_monomeric_10_1 SELEX - 131757186 131757195 8.0E-06 CTCATAAAAA 10
Hoxd9_homeodomain_DBD_monomeric_9_2 SELEX - 131757187 131757195 1.0E-05 CTCATAAAA 9
SPI1_ETS_full_monomeric_14_1 SELEX + 131750971 131750984 4.0E-06 ATAAACAGGAAGTC 14
FOXB1_forkhead_full_monomeric_9_1 SELEX + 131756888 131756896 4.0E-06 TGTAAATAA 9
REST_MA0138.2 JASPAR - 131753992 131754012 0.0E+00 GGCAGGACCACGGAGAGCGCC 21
Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 131755975 131755987 5.0E-06 AAAAAGAAAAACA 13
Irx3_homeodomain_DBD_dimeric_12_1 SELEX + 131756006 131756017 7.0E-06 CTACATGTTAAA 12
HOXB13_homeodomain_DBD_monomeric_10_1 SELEX - 131757186 131757195 9.0E-06 CTCATAAAAA 10
ZIC1_C2H2_full_monomeric_14_1 SELEX + 131757203 131757216 7.0E-06 TACCACCTGTGGTG 14
V_FOXP1_01_M00987 TRANSFAC - 131755978 131755997 1.0E-06 ATAACTATGTTGTTTTTCTT 20
V_FOXP1_01_M00987 TRANSFAC + 131756972 131756991 8.0E-06 TTGTTCTTTTTTTCTATTTC 20
V_SPI1_01_M01203 TRANSFAC + 131750971 131750987 6.0E-06 ATAAACAGGAAGTCTTT 17
V_MAFK_03_M02776 TRANSFAC - 131757088 131757102 9.0E-06 AAAAAGTGCTTTCTT 15
V_NRSF_Q4_M01028 TRANSFAC + 131753993 131754011 1.0E-06 GCGCTCTCCGTGGTCCTGC 19
V_BCL6B_03_M02740 TRANSFAC - 131757057 131757072 7.0E-06 GCTTTCCAGTAATACA 16
V_ZFX_01_M01593 TRANSFAC + 131753975 131753990 1.0E-06 GCCCAGGCCTTGGCGG 16
V_HMGIY_Q3_M01010 TRANSFAC + 131750984 131750998 3.0E-06 CTTTTAATTTCTTTT 15
V_HMGIY_Q3_M01010 TRANSFAC + 131756160 131756174 7.0E-06 CTTGGAATTTTTTTC 15
V_FOXD3_01_M00130 TRANSFAC - 131756103 131756114 9.0E-06 AACTGTTTGTTT 12
V_BCL6_01_M01183 TRANSFAC - 131755977 131755992 0.0E+00 TATGTTGTTTTTCTTT 16
V_BCL6_01_M01183 TRANSFAC + 131756157 131756172 5.0E-06 AAACTTGGAATTTTTT 16
V_BCL6_01_M01183 TRANSFAC + 131756894 131756909 4.0E-06 TAACAGGATATATTTT 16
V_BCL6_01_M01183 TRANSFAC - 131757091 131757106 7.0E-06 TTAGAAAAAGTGCTTT 16
V_BCL6_01_M01183 TRANSFAC + 131757292 131757307 8.0E-06 TCTCTAGCTTTTCTTT 16
V_ETS_B_M00340 TRANSFAC + 131750974 131750987 0.0E+00 AACAGGAAGTCTTT 14
V_ETS_B_M00340 TRANSFAC + 131756895 131756908 2.0E-06 AACAGGATATATTT 14
V_FOXO4_02_M00476 TRANSFAC - 131755978 131755991 2.0E-06 ATGTTGTTTTTCTT 14
V_STAT_Q6_M00777 TRANSFAC + 131754184 131754196 1.0E-05 AAAACTTCTTAGA 13
V_PROP1_01_M01294 TRANSFAC + 131750988 131750998 1.0E-05 TAATTTCTTTT 11
V_MEF2_02_M00231 TRANSFAC + 131756946 131756967 5.0E-06 CCCAGGGCTATTTATAGCTCAA 22
V_MEF2_02_M00231 TRANSFAC - 131756948 131756969 0.0E+00 TTTTGAGCTATAAATAGCCCTG 22
V_ZTA_Q2_M00711 TRANSFAC - 131756789 131756801 1.0E-06 TCACCCTGACTCA 13
V_TBR2_01_M01774 TRANSFAC + 131757049 131757057 6.0E-06 AGGTGTGAT 9
V_IRF_Q6_01_M00972 TRANSFAC + 131755974 131755984 7.0E-06 GAAAAAGAAAA 11
V_IRF2_Q6_M01882 TRANSFAC - 131750987 131751002 7.0E-06 TGTAAAAAGAAATTAA 16
V_IRF2_Q6_M01882 TRANSFAC + 131755972 131755987 7.0E-06 GGGAAAAAGAAAAACA 16
V_IRF2_Q6_M01882 TRANSFAC - 131756978 131756993 9.0E-06 TTGAAATAGAAAAAAA 16
V_HNF4ALPHA_Q6_M00638 TRANSFAC + 131756928 131756940 0.0E+00 AAGAACTTTGAAT 13
V_NKX25_Q6_M02108 TRANSFAC - 131756988 131756998 2.0E-06 ATCACTTGAAA 11
V_FOXO3A_Q1_M01137 TRANSFAC + 131756888 131756899 7.0E-06 TGTAAATAACAG 12
V_EAR2_Q2_M01728 TRANSFAC + 131755994 131756007 7.0E-06 TTATCTTTGGCCCT 14
V_NKX24_01_M01350 TRANSFAC - 131756986 131757001 2.0E-06 AAAATCACTTGAAATA 16
V_AFP1_Q6_M00616 TRANSFAC + 131755981 131755991 9.0E-06 AAAAACAACAT 11
V_AFP1_Q6_M00616 TRANSFAC + 131756892 131756902 1.0E-05 AATAACAGGAT 11
V_PU1_Q4_M01172 TRANSFAC + 131757297 131757315 9.0E-06 AGCTTTTCTTTCCTGTATT 19
V_TCFAP2E_04_M02926 TRANSFAC - 131756165 131756178 2.0E-06 TTCAGAAAAAAATT 14
V_TCFAP2E_04_M02926 TRANSFAC - 131756977 131756990 1.0E-06 AAATAGAAAAAAAG 14
V_TCFAP2E_04_M02926 TRANSFAC - 131757300 131757313 2.0E-06 TACAGGAAAGAAAA 14
V_HOXA13_03_M01430 TRANSFAC - 131757184 131757199 5.0E-06 GGTTCTCATAAAAAGG 16
V_HOXC13_01_M01317 TRANSFAC - 131757184 131757199 6.0E-06 GGTTCTCATAAAAAGG 16
V_HELIOSA_01_M01003 TRANSFAC + 131755968 131755978 3.0E-06 CATAGGGAAAA 11
V_MEF2A_Q6_M02024 TRANSFAC + 131756954 131756963 2.0E-06 TATTTATAGC 10
V_MEF2A_Q6_M02024 TRANSFAC + 131757312 131757321 2.0E-06 TATTTTAAAA 10
V_NRSE_B_M00325 TRANSFAC - 131753992 131754012 1.0E-06 GGCAGGACCACGGAGAGCGCC 21
V_BCL6_02_M01185 TRANSFAC - 131757060 131757073 4.0E-06 TGCTTTCCAGTAAT 14
V_BCL6_02_M01185 TRANSFAC - 131757083 131757096 9.0E-06 TGCTTTCTTAGAGT 14
V_PDEF_02_M02075 TRANSFAC + 131756896 131756905 6.0E-06 ACAGGATATA 10
V_ELF4_04_M02850 TRANSFAC - 131756164 131756180 7.0E-06 CCTTCAGAAAAAAATTC 17
V_SOX13_03_M02797 TRANSFAC - 131756966 131756981 2.0E-06 AAAAGAACAAATTTTT 16
V_FOXA2_02_M02853 TRANSFAC - 131756968 131756982 5.0E-06 AAAAAGAACAAATTT 15
V_POU3F2_01_M00463 TRANSFAC + 131757355 131757368 1.0E-06 TTACATTTTATCAT 14
V_PR_01_M00954 TRANSFAC + 131756958 131756984 3.0E-06 TATAGCTCAAAAATTTGTTCTTTTTTT 27
V_HNF3G_Q4_M02015 TRANSFAC - 131756104 131756111 7.0E-06 TGTTTGTT 8
V_NKX31_02_M02782 TRANSFAC + 131750995 131751011 7.0E-06 TTTTTACACTTAAGAAA 17
V_TATA_01_M00252 TRANSFAC - 131756948 131756962 1.0E-06 CTATAAATAGCCCTG 15
V_NKX61_01_M00424 TRANSFAC + 131750984 131750996 1.0E-06 CTTTTAATTTCTT 13
V_SPDEF_03_M02811 TRANSFAC - 131756891 131756906 4.0E-06 ATATATCCTGTTATTT 16
V_RSRFC4_Q2_M00407 TRANSFAC - 131756949 131756965 0.0E+00 GAGCTATAAATAGCCCT 17
V_RSRFC4_Q2_M00407 TRANSFAC + 131756950 131756966 1.0E-06 GGGCTATTTATAGCTCA 17
V_IRX4_01_M01410 TRANSFAC + 131756003 131756019 7.0E-06 GCCCTACATGTTAAAAG 17
V_TBX5_02_M01020 TRANSFAC + 131757047 131757056 8.0E-06 TGAGGTGTGA 10
V_HOXB6_01_M01460 TRANSFAC - 131756092 131756107 1.0E-05 TGTTTCTAATTACGGA 16
V_EVI1_01_M00078 TRANSFAC + 131756560 131756575 0.0E+00 TGATAAGATAAGAGGA 16
V_RFX4_04_M02893 TRANSFAC + 131756017 131756031 4.0E-06 AAGCATAGATACACA 15
V_IRF_Q6_M00772 TRANSFAC - 131755974 131755988 5.0E-06 TTGTTTTTCTTTTTC 15
V_PAX2_01_M00098 TRANSFAC + 131757360 131757378 6.0E-06 TTTTATCATGAGTGATGTT 19
V_MEF2_03_M00232 TRANSFAC + 131756946 131756967 7.0E-06 CCCAGGGCTATTTATAGCTCAA 22
V_MEF2_03_M00232 TRANSFAC - 131756948 131756969 0.0E+00 TTTTGAGCTATAAATAGCCCTG 22
V_SREBP_Q6_M01168 TRANSFAC + 131756938 131756952 9.0E-06 AATCTCACCCCAGGG 15
V_NKX52_01_M01315 TRANSFAC - 131750982 131750998 1.0E-05 AAAAGAAATTAAAAGAC 17
V_REST_01_M01256 TRANSFAC + 131753988 131754009 0.0E+00 CGGCGGCGCTCTCCGTGGTCCT 22
V_OCT1_04_M00138 TRANSFAC - 131757346 131757368 2.0E-06 ATGATAAAATGTAAAATCTCAGA 23
V_ZBRK1_01_M01105 TRANSFAC + 131756713 131756727 7.0E-06 GGGGAGCAGATGATG 15
V_MEF2_04_M00233 TRANSFAC - 131756948 131756969 1.0E-05 TTTTGAGCTATAAATAGCCCTG 22
V_MEF2_04_M00233 TRANSFAC - 131756980 131757001 3.0E-06 AAAATCACTTGAAATAGAAAAA 22
V_SPIB_01_M01204 TRANSFAC + 131750971 131750987 1.0E-06 ATAAACAGGAAGTCTTT 17
V_AP1_C_M00199 TRANSFAC + 131756788 131756796 3.0E-06 ATGAGTCAG 9
V_MEF2_Q6_01_M00941 TRANSFAC + 131756951 131756962 1.0E-06 GGCTATTTATAG 12
V_CETS1P54_01_M00032 TRANSFAC + 131750975 131750984 9.0E-06 ACAGGAAGTC 10
V_AP1_01_M00517 TRANSFAC + 131756786 131756798 9.0E-06 GAATGAGTCAGGG 13
V_CTCF_02_M01259 TRANSFAC + 131757267 131757286 6.0E-06 TGTCTACCAATAGGTGGCAT 20
V_CTCF_01_M01200 TRANSFAC - 131753912 131753931 4.0E-06 GCAACCCCCAGGGGGCGCTC 20
V_PAX8_B_M00328 TRANSFAC - 131756611 131756628 2.0E-06 ACACTGATGGGTGAGATG 18
V_FOXO1_Q5_M01216 TRANSFAC + 131755981 131755989 5.0E-06 AAAAACAAC 9
V_GR_Q6_02_M01836 TRANSFAC + 131756968 131756980 1.0E-06 AAATTTGTTCTTT 13
V_GFI1_Q6_M01067 TRANSFAC - 131756990 131757002 3.0E-06 AAAAATCACTTGA 13
V_MTF1_06_M02882 TRANSFAC + 131751002 131751015 3.0E-06 ACTTAAGAAACAAC 14
V_MTF1_06_M02882 TRANSFAC + 131756096 131756109 3.0E-06 TAATTAGAAACAAA 14
V_MTF1_06_M02882 TRANSFAC - 131756977 131756990 1.0E-06 AAATAGAAAAAAAG 14
V_TBP_01_M00471 TRANSFAC - 131756954 131756961 4.0E-06 TATAAATA 8
V_IPF1_05_M01255 TRANSFAC - 131750984 131750995 6.0E-06 AGAAATTAAAAG 12
V_GATA1_04_M00128 TRANSFAC + 131756562 131756574 1.0E-06 ATAAGATAAGAGG 13
V_FOXL1_02_M02857 TRANSFAC + 131755977 131755992 3.0E-06 AAAGAAAAACAACATA 16
V_SIRT6_01_M01797 TRANSFAC + 131756565 131756572 7.0E-06 AGATAAGA 8
V_MYOGNF1_01_M00056 TRANSFAC - 131754165 131754193 2.0E-06 AAGAAGTTTTCTTTGGTGAGTGCCAAAAA 29
V_PARP_Q3_M01211 TRANSFAC - 131757097 131757106 3.0E-06 TTAGAAAAAG 10
V_TCF7_04_M02921 TRANSFAC + 131756094 131756108 2.0E-06 CGTAATTAGAAACAA 15
V_TCF7_04_M02921 TRANSFAC + 131757309 131757323 5.0E-06 CTGTATTTTAAAAAC 15
V_GATA6_01_M00462 TRANSFAC - 131755992 131756001 9.0E-06 AAAGATAACT 10
V_DMRT7_01_M01151 TRANSFAC + 131756696 131756709 3.0E-06 TTGATACCATTTTT 14
V_NRSF_01_M00256 TRANSFAC - 131753992 131754012 0.0E+00 GGCAGGACCACGGAGAGCGCC 21
V_REST_02_M02256 TRANSFAC - 131753992 131754012 0.0E+00 GGCAGGACCACGGAGAGCGCC 21
V_RSRFC4_01_M00026 TRANSFAC + 131756950 131756965 0.0E+00 GGGCTATTTATAGCTC 16
V_RSRFC4_01_M00026 TRANSFAC - 131756950 131756965 2.0E-06 GAGCTATAAATAGCCC 16
V_PLZF_02_M01075 TRANSFAC - 131750973 131751001 2.0E-06 GTAAAAAGAAATTAAAAGACTTCCTGTTT 29
V_ETS1_B_M00339 TRANSFAC + 131750975 131750989 7.0E-06 ACAGGAAGTCTTTTA 15
V_TITF1_Q3_M00432 TRANSFAC - 131754068 131754077 5.0E-06 AATCAAGTGT 10
V_IRF1_Q6_01_M01881 TRANSFAC + 131750988 131751001 9.0E-06 TAATTTCTTTTTAC 14
V_DMRT2_01_M01147 TRANSFAC - 131757073 131757088 9.0E-06 TAGAGTGTTCCTTTCT 16
V_MYF6_03_M02781 TRANSFAC + 131756104 131756119 3.0E-06 AACAAACAGTTGCCTG 16
V_SRF_06_M02916 TRANSFAC + 131755972 131755988 9.0E-06 GGGAAAAAGAAAAACAA 17
V_SRF_06_M02916 TRANSFAC + 131755973 131755989 3.0E-06 GGAAAAAGAAAAACAAC 17
V_FOXJ2_01_M00422 TRANSFAC + 131756099 131756116 8.0E-06 TTAGAAACAAACAGTTGC 18
V_SIX6_01_M01345 TRANSFAC - 131756692 131756708 8.0E-06 AAAATGGTATCAACTGC 17
V_YY1_01_M00059 TRANSFAC + 131756697 131756713 0.0E+00 TGATACCATTTTTTAAG 17
V_PIT1_Q6_M00802 TRANSFAC - 131750966 131750983 4.0E-06 ACTTCCTGTTTATCTCCA 18
V_SOX15_04_M02903 TRANSFAC - 131750986 131751000 9.0E-06 TAAAAAGAAATTAAA 15
V_MEF2A_05_M01301 TRANSFAC + 131756951 131756962 1.0E-06 GGCTATTTATAG 12
V_MEF2A_05_M01301 TRANSFAC - 131756953 131756964 5.0E-06 AGCTATAAATAG 12
V_GATA5_03_M02756 TRANSFAC + 131756555 131756571 9.0E-06 CTGTTTGATAAGATAAG 17
V_HMEF2_Q6_M00406 TRANSFAC - 131756949 131756964 1.0E-06 AGCTATAAATAGCCCT 16
V_HMX3_02_M01413 TRANSFAC - 131750982 131750998 6.0E-06 AAAAGAAATTAAAAGAC 17
V_MAFK_04_M02880 TRANSFAC - 131756159 131756173 5.0E-06 AAAAAAATTCCAAGT 15
V_GATA6_04_M02757 TRANSFAC + 131756560 131756576 1.0E-05 TGATAAGATAAGAGGAG 17
V_GFI1_Q6_01_M02010 TRANSFAC + 131757347 131757356 7.0E-06 CTGAGATTTT 10
V_TCF3_05_M02920 TRANSFAC + 131755971 131755985 6.0E-06 AGGGAAAAAGAAAAA 15
V_STAT1_05_M01260 TRANSFAC + 131757058 131757079 6.0E-06 GTATTACTGGAAAGCAGAAAGG 22
V_SMAD1_01_M01590 TRANSFAC + 131755975 131755986 8.0E-06 AAAAAGAAAAAC 12
V_NANOG_02_M01247 TRANSFAC + 131755971 131755990 7.0E-06 AGGGAAAAAGAAAAACAACA 20
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL