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COL9A3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 1299 collagen, type IX, alpha 3 chr20 + 61443413 - 61448913 61448413 Transcription Factor Binding Sites   Download all TFBS in the COL9A3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints THRB_nuclearreceptor_DBD_dimeric_20_1 SELEX + 61449910 61449929 8.0E-06 GTGTCCCTGGCTGGGGAGAC 20 IRF7_IRF_DBD_dimeric_14_1 SELEX - 61448223 61448236 7.0E-06 GCGAAAACAAAAAA 14 STAT1_MA0137.2 JASPAR - 61447632 61447646 0.0E+00 CATTTCCCAGAAGCT 15 ZIC4_C2H2_DBD_monomeric_15_1 SELEX + 61446818 61446832 8.0E-06 GGCCCCCTGCTGTCT 15 TFAP2B_TFAP_DBD_dimeric_12_1 SELEX + 61447568 61447579 3.0E-06 TCCCCTAGGGCA 12 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 61448224 61448234 9.0E-06 GAAAACAAAAA 11 SP1_MA0079.2 JASPAR - 61447510 61447519 3.0E-06 CCCCTCCCCC 10 znf143_MA0088.1 JASPAR - 61446647 61446666 6.0E-06 CTATCCCCATGATGCCCAGC 20 HEY1_bHLH_DBD_dimeric_10_1 SELEX + 61450402 61450411 8.0E-06 CACACGTGCC 10 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 61448224 61448234 9.0E-06 GAAAACAAAAA 11 TFAP2C_TFAP_full_dimeric_12_1 SELEX + 61447470 61447481 7.0E-06 ACCCCCAGGGCA 12 TFAP2C_TFAP_full_dimeric_12_1 SELEX + 61447568 61447579 2.0E-06 TCCCCTAGGGCA 12 TFAP2A_MA0003.1 JASPAR - 61447570 61447578 8.0E-06 GCCCTAGGG 9 TFAP2A_TFAP_DBD_dimeric_12_1 SELEX + 61447568 61447579 3.0E-06 TCCCCTAGGGCA 12 TFAP2A_TFAP_DBD_dimeric_12_1 SELEX - 61450014 61450025 2.0E-06 TCCCCTCAGGCA 12 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 61448222 61448234 8.0E-06 GAAAACAAAAAAG 13 Tcfap2a_TFAP_DBD_dimeric_12_1 SELEX - 61450014 61450025 9.0E-06 TCCCCTCAGGCA 12 ZIC1_C2H2_full_monomeric_14_1 SELEX + 61446818 61446831 7.0E-06 GGCCCCCTGCTGTC 14 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 61448221 61448234 4.0E-06 GAAAACAAAAAAGA 14 V_AP2ALPHA_01_M00469 TRANSFAC - 61447570 61447578 8.0E-06 GCCCTAGGG 9 V_AP1_Q2_M00173 TRANSFAC - 61450933 61450943 4.0E-06 GATGACTAAGT 11 V_STAT5A_Q6_M01890 TRANSFAC - 61447635 61447647 5.0E-06 CCATTTCCCAGAA 13 V_NF1A_Q6_M02103 TRANSFAC + 61450294 61450309 4.0E-06 CTGGCCCTTAGCCAGG 16 V_FOXJ2_02_M00423 TRANSFAC - 61447054 61447067 4.0E-06 AAAATAATAGTGTC 14 V_EGR_Q6_M00807 TRANSFAC - 61448083 61448093 7.0E-06 GTGGGGGCGGA 11 V_SRY_02_M00160 TRANSFAC - 61448223 61448234 1.0E-06 GAAAACAAAAAA 12 V_STAT5B_01_M00459 TRANSFAC - 61447632 61447646 7.0E-06 CATTTCCCAGAAGCT 15 V_SP1_03_M02281 TRANSFAC - 61447510 61447519 3.0E-06 CCCCTCCCCC 10 V_PU1_Q4_M01172 TRANSFAC - 61449952 61449970 7.0E-06 TGTTCTGAGTTCCCCCTTT 19 V_STAT4_Q4_M01666 TRANSFAC - 61447630 61447643 2.0E-06 TTCCCAGAAGCTCA 14 V_NRSE_B_M00325 TRANSFAC + 61446931 61446951 2.0E-06 TTCAGCTCCTCCCACCTCGCC 21 V_AP1_Q6_M00174 TRANSFAC - 61450933 61450943 3.0E-06 GATGACTAAGT 11 V_PAX5_02_M00144 TRANSFAC - 61446832 61446859 4.0E-06 GGAGAGGTGGGTGGAGCAGGTCAGCCCA 28 V_GC_01_M00255 TRANSFAC + 61447509 61447522 2.0E-06 TGGGGGAGGGGCTG 14 V_FOXO1_02_M00474 TRANSFAC + 61448224 61448237 1.0E-05 TTTTTGTTTTCGCC 14 V_TCFAP2C_03_M02821 TRANSFAC + 61450012 61450026 5.0E-06 GTTGCCTGAGGGGAG 15 V_ZBP89_Q4_M01816 TRANSFAC - 61447509 61447518 4.0E-06 CCCTCCCCCA 10 V_AP1_Q4_M00188 TRANSFAC - 61450933 61450943 3.0E-06 GATGACTAAGT 11 V_SP1_Q6_M00196 TRANSFAC + 61447509 61447521 8.0E-06 TGGGGGAGGGGCT 13 V_LHX2_01_M01325 TRANSFAC - 61448891 61448907 9.0E-06 AAAACTCATTAAGGAGC 17 V_ZBRK1_01_M01105 TRANSFAC + 61449923 61449937 3.0E-06 GGGAGACAGCCTTTT 15 V_STAT4_Q5_M02117 TRANSFAC + 61447635 61447644 7.0E-06 TTCTGGGAAA 10 V_STAT3_03_M01595 TRANSFAC + 61447633 61447648 0.0E+00 GCTTCTGGGAAATGGA 16 V_FOXO1_Q5_M01216 TRANSFAC - 61448226 61448234 5.0E-06 GAAAACAAA 9 V_SP4_Q5_M01273 TRANSFAC - 61447510 61447520 5.0E-06 GCCCCTCCCCC 11 V_SP4_Q5_M01273 TRANSFAC + 61450658 61450668 7.0E-06 GCCCCTCCCCG 11 V_HBP1_04_M02866 TRANSFAC + 61450894 61450910 3.0E-06 AGTGCCCATTGTCAGGA 17 V_ZIC2_05_M02940 TRANSFAC - 61451017 61451031 4.0E-06 CAACCCAGCAGGACT 15 V_POU6F1_02_M01462 TRANSFAC + 61448892 61448908 2.0E-06 CTCCTTAATGAGTTTTC 17 V_AP4_01_M00005 TRANSFAC + 61450131 61450148 5.0E-06 TGGACCAGCGCCAGGCAG 18 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC + 61446918 61446926 8.0E-06 GAGGGTGGG 9 V_DMRT7_01_M01151 TRANSFAC + 61450501 61450514 6.0E-06 TTGCTTCATTGCTG 14 V_TCFAP2B_03_M02820 TRANSFAC + 61447567 61447580 7.0E-06 GTCCCCTAGGGCAG 14 V_TCFAP2B_03_M02820 TRANSFAC + 61450013 61450026 7.0E-06 TTGCCTGAGGGGAG 14 V_STAT1STAT1_Q3_M01212 TRANSFAC - 61447633 61447645 3.0E-06 ATTTCCCAGAAGC 13 V_ZFP281_01_M01597 TRANSFAC + 61447509 61447519 1.0E-06 TGGGGGAGGGG 11 V_TCFAP2A_03_M02819 TRANSFAC + 61450012 61450026 4.0E-06 GTTGCCTGAGGGGAG 15 V_STAT5A_01_M00457 TRANSFAC + 61447632 61447646 7.0E-06 AGCTTCTGGGAAATG 15 V_SRF_06_M02916 TRANSFAC - 61448220 61448236 5.0E-06 GCGAAAACAAAAAAGAC 17 V_POU6F1_03_M01479 TRANSFAC + 61448892 61448908 1.0E-06 CTCCTTAATGAGTTTTC 17 V_SMAD3_Q6_M00701 TRANSFAC - 61451120 61451128 1.0E-05 TGTCTGCCT 9 V_SOX4_01_M01308 TRANSFAC - 61448724 61448731 1.0E-05 AACAAAGG 8 V_CTF1_01_M01196 TRANSFAC + 61450295 61450308 9.0E-06 TGGCCCTTAGCCAG 14 V_P300_01_M00033 TRANSFAC + 61450068 61450081 3.0E-06 GAGGGGAGTGTGTG 14 V_TCFAP2E_03_M02822 TRANSFAC + 61450012 61450026 6.0E-06 GTTGCCTGAGGGGAG 15 V_TCF3_05_M02920 TRANSFAC - 61448224 61448238 1.0E-06 GGGCGAAAACAAAAA 15 TLX1_NFIC_MA0119.1 JASPAR + 61450295 61450308 9.0E-06 TGGCCCTTAGCCAG 14 V_STAT1_Q6_M01823 TRANSFAC + 61447635 61447644 2.0E-06 TTCTGGGAAA 10 V_STAT1_05_M01260 TRANSFAC + 61447632 61447653 0.0E+00 AGCTTCTGGGAAATGGACATGG 22 V_SMAD1_01_M01590 TRANSFAC - 61448223 61448234 5.0E-06 GAAAACAAAAAA 12 V_SOX9_Q4_M01284 TRANSFAC - 61448722 61448732 6.0E-06 GAACAAAGGCC 11 V_ZIC1_05_M02939 TRANSFAC - 61451017 61451031 2.0E-06 CAACCCAGCAGGACT 15

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