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COL9A1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 1297 chr6 + 71007786 - 71017786 0 Transcription Factor Binding Sites   Download all TFBS in the COL9A1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NKX2-8_homeodomain_full_monomeric_9_1 SELEX + 71009353 71009361 8.0E-06 ACACTTGAA 9 FOXF2_MA0030.1 JASPAR + 71007913 71007926 5.0E-06 TAATAATAAACACT 14 FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 71007908 71007924 2.0E-06 ACCACTAATAATAAACA 17 MEF2D_MADS_DBD_dimeric_12_1 SELEX + 71007911 71007922 1.0E-06 ACTAATAATAAA 12 FOXL1_forkhead_full_dimeric_13_1 SELEX + 71007913 71007925 9.0E-06 TAATAATAAACAC 13 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 71007911 71007922 2.0E-06 ACTAATAATAAA 12 MEF2B_MADS_full_dimeric_12_1 SELEX + 71007911 71007922 2.0E-06 ACTAATAATAAA 12 MEF2A_MA0052.1 JASPAR - 71007912 71007921 9.0E-06 TTATTATTAG 10 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX + 71007911 71007924 3.0E-06 ACTAATAATAAACA 14 SOX14_HMG_DBD_dimeric_13_1 SELEX + 71007930 71007942 7.0E-06 CCAATACCAGTGT 13 LHX9_homeodomain_DBD_dimeric_13_1 SELEX + 71007916 71007928 6.0E-06 TAATAAACACTTA 13 LHX9_homeodomain_DBD_dimeric_13_1 SELEX - 71007916 71007928 4.0E-06 TAAGTGTTTATTA 13 SRY_HMG_DBD_dimeric_13_1 SELEX + 71007930 71007942 1.0E-05 CCAATACCAGTGT 13 Sox1_HMG_DBD_dimeric_15_1 SELEX + 71007929 71007943 4.0E-06 CCCAATACCAGTGTG 15 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 71007911 71007924 5.0E-06 ACTAATAATAAACA 14 V_FREAC7_01_M00293 TRANSFAC + 71007913 71007928 7.0E-06 TAATAATAAACACTTA 16 V_MEF2_02_M00231 TRANSFAC + 71007905 71007926 9.0E-06 TTCACCACTAATAATAAACACT 22 V_RFX4_03_M02789 TRANSFAC + 71007985 71007999 4.0E-06 CTACATAGCAACCTC 15 V_HFH4_01_M00742 TRANSFAC - 71007915 71007927 7.0E-06 AAGTGTTTATTAT 13 V_CDP_04_M01344 TRANSFAC + 71007913 71007927 4.0E-06 TAATAATAAACACTT 15 V_FOXA2_02_M02853 TRANSFAC + 71007911 71007925 3.0E-06 ACTAATAATAAACAC 15 V_RSRFC4_Q2_M00407 TRANSFAC + 71007909 71007925 3.0E-06 CCACTAATAATAAACAC 17 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 71007914 71007924 8.0E-06 TGTTTATTATT 11 V_HNF1_Q6_01_M01011 TRANSFAC + 71007907 71007927 2.0E-06 CACCACTAATAATAAACACTT 21 V_RFXDC2_03_M02790 TRANSFAC + 71007985 71007999 4.0E-06 CTACATAGCAACCTC 15 V_CUX1_04_M02959 TRANSFAC + 71007913 71007927 4.0E-06 TAATAATAAACACTT 15 V_FOXL1_04_M02753 TRANSFAC + 71007913 71007929 7.0E-06 TAATAATAAACACTTAC 17 V_NKX3A_02_M01383 TRANSFAC - 71008051 71008067 6.0E-06 GGGAAAGTACTTAGACT 17 V_RSRFC4_01_M00026 TRANSFAC - 71007909 71007924 7.0E-06 TGTTTATTATTAGTGG 16 V_FOXO1_01_M00473 TRANSFAC + 71007917 71007926 9.0E-06 AATAAACACT 10 V_RFX3_04_M02788 TRANSFAC + 71007981 71008003 2.0E-06 TACTCTACATAGCAACCTCATGA 23 V_GATA1_02_M00126 TRANSFAC + 71008043 71008056 1.0E-05 GTAAAGATAGTCTA 14 V_GLIS2_04_M02863 TRANSFAC + 71007911 71007924 2.0E-06 ACTAATAATAAACA 14

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