Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

C22orf25 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 128989 transport and golgi organization 2 homolog (Drosophila) chr22 + 20003630 - 20009130 20008630 Transcription Factor Binding Sites   Download all TFBS in the C22orf25 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SP8_C2H2_DBD_monomeric_12_1 SELEX + 20004087 20004098 6.0E-06 ACCCCGCCCACT 12 Egr1_MA0162.1 JASPAR + 20004121 20004131 4.0E-06 AGCGTGGGCGG 11 GABPA_MA0062.2 JASPAR + 20008259 20008269 4.0E-06 CCGGAAGTGAG 11 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 20004036 20004046 1.0E-05 GCCCCGCCCCC 11 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 20008461 20008471 1.0E-05 GCCCCGCCCCC 11 FOXA1_MA0148.1 JASPAR + 20009504 20009514 3.0E-06 TGTTTGCACTG 11 ELF4_ETS_full_monomeric_12_1 SELEX + 20008627 20008638 5.0E-06 CACCCGGAAGTC 12 NFYA_MA0060.1 JASPAR - 20004402 20004417 2.0E-06 CTCGACCAATGGGAAA 16 ELF3_ETS_full_monomeric_13_1 SELEX + 20008627 20008639 6.0E-06 CACCCGGAAGTCG 13 ESR1_MA0112.2 JASPAR + 20009062 20009081 3.0E-06 GCGCCCGGTCACTCTGCCCC 20 ESR1_MA0112.2 JASPAR + 20013099 20013118 4.0E-06 AGACCAGGTGGCCCTGCCCT 20 SP1_MA0079.2 JASPAR + 20004037 20004046 7.0E-06 CCCCGCCCCC 10 SP1_MA0079.2 JASPAR - 20008461 20008470 7.0E-06 CCCCGCCCCC 10 NFAT5_NFAT_DBD_dimeric_14_1 SELEX + 20013222 20013235 3.0E-06 ATGGAAAGGCACAG 14 SP4_C2H2_full_monomeric_17_1 SELEX + 20004033 20004049 7.0E-06 GCAGCCCCGCCCCCAGT 17 MAFK_bZIP_full_dimeric_15_1 SELEX - 20013206 20013220 1.0E-05 GTGATGAGGCAGCAG 15 SP1_C2H2_DBD_monomeric_11_1 SELEX + 20004087 20004097 3.0E-06 ACCCCGCCCAC 11 Gata1_MA0035.2 JASPAR - 20013144 20013154 3.0E-06 AGAGATAAGCA 11 ZSCAN4_C2H2_full_monomeric_15_1 SELEX - 20012967 20012981 2.0E-06 TGCACACCCAGTAAG 15 EHF_ETS_full_monomeric_12_1 SELEX + 20008627 20008638 4.0E-06 CACCCGGAAGTC 12 ELF5_ETS_full_monomeric_11_1 SELEX + 20008628 20008638 8.0E-06 ACCCGGAAGTC 11 TBX21_TBX_full_dimeric_19_1 SELEX + 20013458 20013476 8.0E-06 TGACACATTTAAGGCCTCA 19 ELF1_ETS_full_monomeric_12_1 SELEX + 20008256 20008267 9.0E-06 AGTCCGGAAGTG 12 ELF1_ETS_full_monomeric_12_1 SELEX + 20008627 20008638 8.0E-06 CACCCGGAAGTC 12 ELF3_ETS_DBD_monomeric_12_1 SELEX + 20008627 20008638 5.0E-06 CACCCGGAAGTC 12 EGR2_C2H2_DBD_monomeric_11_1 SELEX - 20004121 20004131 5.0E-06 CCGCCCACGCT 11 REST_MA0138.2 JASPAR + 20009040 20009060 1.0E-06 GCCAGCATCAGGGACAGCTCT 21 NFE2L2_MA0150.1 JASPAR - 20009145 20009155 3.0E-06 ATGACCCAGCA 11 V_MINI20_B_M00324 TRANSFAC - 20009159 20009179 3.0E-06 GGAAGGCCGCATCCAGGCGCA 21 V_MTF1_01_M01242 TRANSFAC + 20009658 20009677 1.0E-05 CTGGGCAGCCTTTTGGGGCA 20 V_SPI1_01_M01203 TRANSFAC - 20010617 20010633 7.0E-06 CTAAAAGGGAAGTTGAG 17 V_E2F4_04_M02847 TRANSFAC + 20003749 20003765 4.0E-06 AGCTAGGCGCCAAGCGT 17 V_FLI1_Q6_M01208 TRANSFAC + 20008259 20008269 3.0E-06 CCGGAAGTGAG 11 V_AHR_Q5_M00778 TRANSFAC - 20009636 20009646 7.0E-06 CTAGCGTGAGA 11 V_NRSF_Q4_M01028 TRANSFAC - 20009041 20009059 2.0E-06 GAGCTGTCCCTGATGCTGG 19 V_ESR1_01_M02261 TRANSFAC + 20009062 20009081 3.0E-06 GCGCCCGGTCACTCTGCCCC 20 V_ESR1_01_M02261 TRANSFAC + 20013099 20013118 4.0E-06 AGACCAGGTGGCCCTGCCCT 20 V_MTF1_Q4_M00650 TRANSFAC - 20004336 20004349 2.0E-06 TTTGCGCACGGGCC 14 V_LMAF_Q2_M01139 TRANSFAC - 20009531 20009539 6.0E-06 GGTCAGCAG 9 V_FOXJ1_04_M02854 TRANSFAC + 20013043 20013057 9.0E-06 ATATCACACCACCAC 15 V_SP1_Q6_01_M00931 TRANSFAC + 20008462 20008471 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC - 20008538 20008547 4.0E-06 GGGGCGGGGC 10 V_ZFP740_03_M02834 TRANSFAC + 20009203 20009218 3.0E-06 CCCCCACCCCCAACTC 16 V_HNF4_Q6_M00967 TRANSFAC - 20013256 20013264 7.0E-06 AAAGTCCAT 9 V_MAF_Q6_M00648 TRANSFAC - 20010616 20010631 7.0E-06 AAAAGGGAAGTTGAGA 16 V_SP1_03_M02281 TRANSFAC + 20004037 20004046 7.0E-06 CCCCGCCCCC 10 V_SP1_03_M02281 TRANSFAC - 20008461 20008470 7.0E-06 CCCCGCCCCC 10 V_EGR1_02_M01972 TRANSFAC + 20004121 20004131 6.0E-06 AGCGTGGGCGG 11 V_PU1_Q4_M01172 TRANSFAC + 20010614 20010632 8.0E-06 TCTCTCAACTTCCCTTTTA 19 V_TCFAP2C_04_M02925 TRANSFAC - 20004475 20004488 8.0E-06 AGGCCCAATGGCAA 14 V_BARBIE_01_M00238 TRANSFAC - 20009405 20009419 2.0E-06 CTCTAAAGCTTGTGG 15 V_WT1_Q6_01_M02036 TRANSFAC + 20003874 20003883 4.0E-06 CGCCCCCGCC 10 V_GC_01_M00255 TRANSFAC - 20004085 20004098 8.0E-06 AGTGGGCGGGGTGT 14 V_GC_01_M00255 TRANSFAC - 20004376 20004389 9.0E-06 ATGGGGCGGGGCGG 14 V_GC_01_M00255 TRANSFAC - 20008536 20008549 9.0E-06 GAGGGGCGGGGCGG 14 V_HELIOSA_02_M01004 TRANSFAC + 20009705 20009715 4.0E-06 ACAAGGAAAAC 11 V_TEF_Q6_M00672 TRANSFAC - 20004608 20004619 6.0E-06 ATGTTCTCGTAA 12 V_DOBOX4_01_M01359 TRANSFAC + 20009194 20009210 9.0E-06 TAGTTAGATCCCCCACC 17 V_KROX_Q6_M00982 TRANSFAC + 20003872 20003885 6.0E-06 CCCGCCCCCGCCGG 14 V_SP1_Q6_M00196 TRANSFAC - 20004035 20004047 1.0E-06 TGGGGGCGGGGCT 13 V_SP1_Q6_M00196 TRANSFAC - 20004086 20004098 6.0E-06 AGTGGGCGGGGTG 13 V_SP1_Q6_M00196 TRANSFAC + 20008460 20008472 2.0E-06 CGGGGGCGGGGCG 13 V_SP1_Q6_M00196 TRANSFAC - 20008537 20008549 2.0E-06 GAGGGGCGGGGCG 13 V_EGR1_Q6_M01873 TRANSFAC - 20003873 20003882 4.0E-06 GCGGGGGCGG 10 V_EGR1_Q6_M01873 TRANSFAC + 20004122 20004131 7.0E-06 GCGTGGGCGG 10 V_E2F2_04_M02846 TRANSFAC + 20003749 20003765 9.0E-06 AGCTAGGCGCCAAGCGT 17 V_REST_01_M01256 TRANSFAC - 20009043 20009064 1.0E-06 CGCCAGAGCTGTCCCTGATGCT 22 V_HBP1_03_M02762 TRANSFAC - 20009678 20009693 1.0E-06 TGGATCAATGAATGCT 16 V_SP1SP3_Q4_M01219 TRANSFAC + 20004271 20004281 1.0E-06 CCGCCCCCTCC 11 V_ERR1_Q3_M01841 TRANSFAC - 20013245 20013259 5.0E-06 CCATAACCTGGAAAA 15 V_GR_Q6_M00192 TRANSFAC - 20013006 20013024 4.0E-06 TGGGTTCACTTTGTACAAT 19 V_TEL2_Q6_M00678 TRANSFAC - 20008259 20008268 9.0E-06 TCACTTCCGG 10 V_GATA1_09_M02254 TRANSFAC - 20013144 20013154 3.0E-06 AGAGATAAGCA 11 V_GATA5_04_M02860 TRANSFAC - 20013062 20013078 2.0E-06 GAGGGAGATATCTGGGT 17 V_CTCF_01_M01200 TRANSFAC + 20008469 20008488 2.0E-06 GGCGCCAGGAGGTGGCAGCC 20 V_TAL1BETAITF2_01_M00070 TRANSFAC + 20008310 20008325 1.0E-06 GGTGACAGATGGTGTC 16 V_SP4_Q5_M01273 TRANSFAC + 20004036 20004046 1.0E-06 GCCCCGCCCCC 11 V_SP4_Q5_M01273 TRANSFAC - 20008461 20008471 1.0E-06 GCCCCGCCCCC 11 V_SP4_Q5_M01273 TRANSFAC + 20008538 20008548 8.0E-06 GCCCCGCCCCT 11 V_MINI19_B_M00323 TRANSFAC - 20009159 20009179 5.0E-06 GGAAGGCCGCATCCAGGCGCA 21 V_NFYC_Q5_M02107 TRANSFAC - 20004442 20004455 7.0E-06 CGCCCAATCGGCGC 14 V_TAL1_01_M01591 TRANSFAC + 20013142 20013154 2.0E-06 GTTGCTTATCTCT 13 V_TAL1ALPHAE47_01_M00066 TRANSFAC + 20008310 20008325 1.0E-06 GGTGACAGATGGTGTC 16 V_PLAG1_01_M01778 TRANSFAC - 20013200 20013215 7.0E-06 GAGGCAGCAGGGAGGT 16 V_TEF1_Q6_03_M01817 TRANSFAC + 20009471 20009479 9.0E-06 CAGGAATGT 9 V_NFY_01_M00287 TRANSFAC - 20004402 20004417 3.0E-06 CTCGACCAATGGGAAA 16 V_RBPJK_01_M01112 TRANSFAC - 20009634 20009644 6.0E-06 AGCGTGAGAAA 11 V_NRSF_01_M00256 TRANSFAC + 20009040 20009060 1.0E-06 GCCAGCATCAGGGACAGCTCT 21 V_ASCL2_04_M02841 TRANSFAC - 20008218 20008233 1.0E-06 GTCTCCCCATCCTGTT 16 V_REST_02_M02256 TRANSFAC + 20009040 20009060 1.0E-06 GCCAGCATCAGGGACAGCTCT 21 V_ZFP281_01_M01597 TRANSFAC - 20004037 20004047 6.0E-06 TGGGGGCGGGG 11 V_ZFP281_01_M01597 TRANSFAC - 20009204 20009214 1.0E-06 TGGGGGTGGGG 11 V_ZFP281_04_M02831 TRANSFAC + 20009202 20009216 2.0E-06 TCCCCCACCCCCAAC 15 V_SREBP1_02_M00221 TRANSFAC + 20013044 20013054 7.0E-06 TATCACACCAC 11 V_EFC_Q6_M00626 TRANSFAC + 20013215 20013228 4.0E-06 CATCACCATGGAAA 14 V_SP1_Q2_01_M00933 TRANSFAC + 20004037 20004046 4.0E-06 CCCCGCCCCC 10 V_SP1_Q2_01_M00933 TRANSFAC - 20008461 20008470 4.0E-06 CCCCGCCCCC 10 V_SP1_Q2_01_M00933 TRANSFAC + 20008539 20008548 7.0E-06 CCCCGCCCCT 10 V_NFE2L2_01_M02263 TRANSFAC - 20009145 20009155 3.0E-06 ATGACCCAGCA 11 V_UF1H3BETA_Q6_M01068 TRANSFAC - 20009203 20009216 5.0E-06 GTTGGGGGTGGGGG 14 V_SP1_Q4_01_M00932 TRANSFAC - 20004035 20004047 2.0E-06 TGGGGGCGGGGCT 13 V_SP1_Q4_01_M00932 TRANSFAC - 20004086 20004098 4.0E-06 AGTGGGCGGGGTG 13 V_SP1_Q4_01_M00932 TRANSFAC + 20008460 20008472 3.0E-06 CGGGGGCGGGGCG 13 V_SP1_Q4_01_M00932 TRANSFAC - 20008537 20008549 4.0E-06 GAGGGGCGGGGCG 13 V_TCF11MAFG_01_M00284 TRANSFAC - 20013261 20013282 0.0E+00 ACAAAGTGACACAGTAAGAAAG 22 V_MTF1_05_M02778 TRANSFAC + 20004336 20004351 3.0E-06 GGCCCGTGCGCAAAGC 16 V_EGR3_01_M00245 TRANSFAC + 20004120 20004131 4.0E-06 CAGCGTGGGCGG 12

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.