Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

SIRPD Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 128646 signal-regulatory protein delta chr20 - 1537843 - 1543343 1538343 Transcription Factor Binding Sites   Download all TFBS in the SIRPD promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HSFY2_HSF_DBD_dimer-of-dimers_15_1 SELEX + 1536816 1536830 7.0E-06 TTCTATCAGATAGAA 15 FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 1541812 1541823 2.0E-06 AATATCAACAAA 12 TBX1_TBX_DBD_dimeric_23_1 SELEX + 1541780 1541802 7.0E-06 CCTCAGGCTTTTGAAGTGAGATA 23 ZNF282_C2H2_DBD_monomeric_17_1 SELEX + 1543207 1543223 3.0E-06 CAGTCCCACAACACAAG 17 HLF_MA0043.1 JASPAR - 1543119 1543130 6.0E-06 TGTTACGCAAAT 12 V_HNF1_02_M01379 TRANSFAC - 1543189 1543205 0.0E+00 TGTTACTTAACTAAACT 17 V_HNF1_02_M01379 TRANSFAC + 1543190 1543206 6.0E-06 GTTTAGTTAAGTAACAT 17 V_GATA3_03_M00351 TRANSFAC + 1536758 1536767 2.0E-06 ATAGATCTTA 10 V_HOXA13_02_M01297 TRANSFAC + 1541875 1541883 1.0E-06 AAATAAAAC 9 V_MAFB_03_M02879 TRANSFAC + 1536734 1536748 0.0E+00 AAGTTGCAAAAAAAC 15 V_NKX25_Q6_M02108 TRANSFAC - 1541789 1541799 3.0E-06 CTCACTTCAAA 11 V_CEBP_Q2_M00190 TRANSFAC + 1536734 1536747 5.0E-06 AAGTTGCAAAAAAA 14 V_FOXJ1_03_M02750 TRANSFAC + 1541812 1541827 4.0E-06 AATATCAACAAAGTCT 16 V_GATA_C_M00203 TRANSFAC + 1543132 1543142 8.0E-06 AGATAAATACA 11 V_CEBPB_01_M00109 TRANSFAC - 1536762 1536775 7.0E-06 AGGTTGTGTAAGAT 14 V_TAL1_GATA1_01_M02243 TRANSFAC + 1541787 1541804 3.0E-06 CTTTTGAAGTGAGATAAA 18 V_CEBPB_02_M00117 TRANSFAC - 1543193 1543206 9.0E-06 ATGTTACTTAACTA 14 V_HNF3_Q6_M00791 TRANSFAC + 1543130 1543142 8.0E-06 ATAGATAAATACA 13 V_NKX25_Q5_M01043 TRANSFAC - 1541791 1541800 6.0E-06 TCTCACTTCA 10 Tal1_Gata1_MA0140.1 JASPAR + 1541787 1541804 3.0E-06 CTTTTGAAGTGAGATAAA 18 V_CEBPA_01_M00116 TRANSFAC + 1536734 1536747 6.0E-06 AAGTTGCAAAAAAA 14 V_FOXL1_04_M02753 TRANSFAC + 1541810 1541826 6.0E-06 GGAATATCAACAAAGTC 17 V_TCF1_06_M02815 TRANSFAC - 1543189 1543205 2.0E-06 TGTTACTTAACTAAACT 17 V_PLZF_02_M01075 TRANSFAC + 1541789 1541817 3.0E-06 TTTGAAGTGAGATAAAACTTTGGAATATC 29 V_PLZF_02_M01075 TRANSFAC - 1541794 1541822 8.0E-06 TTGTTGATATTCCAAAGTTTTATCTCACT 29 V_LEF1TCF1_Q4_M00978 TRANSFAC - 1541815 1541825 7.0E-06 ACTTTGTTGAT 11 V_FOXK1_03_M02752 TRANSFAC + 1541810 1541826 2.0E-06 GGAATATCAACAAAGTC 17

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.