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HMGB4 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 127540 high mobility group box 4 chr1 + 34321075 - 34326575 34326075 Transcription Factor Binding Sites   Download all TFBS in the HMGB4 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 34326512 34326524 9.0E-06 TTAAATAACAACA 13 HOXA10_homeodomain_DBD_monomeric_12_1 SELEX - 34326862 34326873 8.0E-06 GGTCGTAAATCT 12 RARB_nuclearreceptor_full_dimeric_16_1 SELEX + 34326480 34326495 1.0E-06 GTGGGTCATGAGGTCA 16 GATA5_GATA_DBD_monomeric_8_1 SELEX - 34325121 34325128 7.0E-06 AGATAAGA 8 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 34326893 34326904 1.0E-05 TTTAAAAATAAG 12 HOXC11_homeodomain_full_monomeric_11_1 SELEX - 34326863 34326873 4.0E-06 GGTCGTAAATC 11 RARA_nuclearreceptor_DBD_dimeric_18_2 SELEX + 34326481 34326498 2.0E-06 TGGGTCATGAGGTCAGTC 18 GATA4_GATA_DBD_monomeric_8_1 SELEX - 34325121 34325128 7.0E-06 AGATAAGA 8 RORA_nuclearreceptor_DBD_dimeric_19_1 SELEX + 34326477 34326495 0.0E+00 TCAGTGGGTCATGAGGTCA 19 Meis3_MEIS_DBD_dimeric_12_1 SELEX + 34325161 34325172 8.0E-06 TCACAGGTTTCA 12 MEF2A_MA0052.1 JASPAR - 34326894 34326903 7.0E-06 TTATTTTTAA 10 NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX + 34326481 34326496 0.0E+00 TGGGTCATGAGGTCAG 16 GATA3_GATA_full_monomeric_8_1 SELEX - 34325121 34325128 7.0E-06 AGATAAGA 8 Hoxa11_homeodomain_DBD_monomeric_12_1 SELEX - 34326862 34326873 2.0E-06 GGTCGTAAATCT 12 Evi1_MA0029.1 JASPAR - 34325116 34325129 1.0E-06 TAGATAAGATTACT 14 HOXD12_homeodomain_DBD_monomeric_11_1 SELEX - 34326863 34326873 4.0E-06 GGTCGTAAATC 11 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX + 34326481 34326495 4.0E-06 TGGGTCATGAGGTCA 15 HOXC12_homeodomain_DBD_monomeric_11_1 SELEX - 34326863 34326873 6.0E-06 GGTCGTAAATC 11 RARG_nuclearreceptor_full_dimeric_16_1 SELEX + 34326481 34326496 5.0E-06 TGGGTCATGAGGTCAG 16 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 34326512 34326524 6.0E-06 TTAAATAACAACA 13 RARA_nuclearreceptor_full_dimeric_15_1 SELEX + 34326481 34326495 2.0E-06 TGGGTCATGAGGTCA 15 RORA_2_MA0072.1 JASPAR + 34326475 34326488 8.0E-06 CATCAGTGGGTCAT 14 V_FOXP1_01_M00987 TRANSFAC - 34326512 34326531 1.0E-06 TACTTTATGTTGTTATTTAA 20 V_DBX1_01_M01483 TRANSFAC + 34326887 34326903 1.0E-06 CTATTTTTTAAAAATAA 17 V_DBX1_01_M01483 TRANSFAC - 34326887 34326903 1.0E-05 TTATTTTTAAAAAATAG 17 V_EVI1_05_M00082 TRANSFAC - 34325118 34325128 2.0E-06 AGATAAGATTA 11 V_ALX4_01_M00619 TRANSFAC + 34325110 34325122 4.0E-06 CCTTAGAGTAATC 13 V_GATA2_02_M00348 TRANSFAC - 34325121 34325130 8.0E-06 GTAGATAAGA 10 V_SATB1_Q3_M01723 TRANSFAC + 34326512 34326527 1.0E-05 TTAAATAACAACATAA 16 V_MEF2_02_M00231 TRANSFAC + 34326887 34326908 6.0E-06 CTATTTTTTAAAAATAAGGTTT 22 V_MEIS1AHOXA9_01_M00420 TRANSFAC + 34326858 34326871 1.0E-06 TGGCAGATTTACGA 14 V_MEIS1AHOXA9_01_M00420 TRANSFAC - 34327847 34327860 8.0E-06 TAGCAGATTTAAGA 14 V_RP58_01_M00532 TRANSFAC + 34326836 34326847 7.0E-06 CTCACATCTGTA 12 V_NKX25_Q6_M02108 TRANSFAC + 34325212 34325222 1.0E-05 GCCACTTGCAG 11 V_GABPA_04_M02858 TRANSFAC - 34328159 34328174 1.0E-06 CCTTTTTCCCCCTGGC 16 V_MEF2A_Q6_M02024 TRANSFAC - 34326509 34326518 9.0E-06 TATTTAAAAT 10 V_MEF2A_Q6_M02024 TRANSFAC - 34326893 34326902 1.0E-06 TATTTTTAAA 10 V_ZFP105_03_M02827 TRANSFAC + 34326511 34326525 1.0E-06 TTTAAATAACAACAT 15 V_GATA3_05_M02859 TRANSFAC + 34325112 34325133 3.0E-06 TTAGAGTAATCTTATCTACAAA 22 V_HOXC12_01_M01437 TRANSFAC - 34326860 34326876 3.0E-06 GGGGGTCGTAAATCTGC 17 V_MEF2_Q6_01_M00941 TRANSFAC - 34326510 34326521 6.0E-06 TGTTATTTAAAA 12 V_NCX_02_M01420 TRANSFAC + 34326887 34326903 3.0E-06 CTATTTTTTAAAAATAA 17 V_ARID3A_04_M02735 TRANSFAC - 34326507 34326523 4.0E-06 GTTGTTATTTAAAATGC 17 V_TBP_06_M02814 TRANSFAC + 34326507 34326522 3.0E-06 GCATTTTAAATAACAA 16 V_TBP_06_M02814 TRANSFAC + 34326887 34326902 1.0E-06 CTATTTTTTAAAAATA 16 V_TBP_06_M02814 TRANSFAC - 34326888 34326903 2.0E-06 TTATTTTTAAAAAATA 16 V_TBP_06_M02814 TRANSFAC + 34326889 34326904 6.0E-06 ATTTTTTAAAAATAAG 16 V_TBP_06_M02814 TRANSFAC - 34326889 34326904 3.0E-06 CTTATTTTTAAAAAAT 16 V_SRF_03_M01304 TRANSFAC + 34325142 34325154 6.0E-06 TACCAAGTAAGGA 13 V_MTF1_06_M02882 TRANSFAC - 34326888 34326901 7.0E-06 ATTTTTAAAAAATA 14 V_MTF1_06_M02882 TRANSFAC + 34326889 34326902 6.0E-06 ATTTTTTAAAAATA 14 V_SIRT6_01_M01797 TRANSFAC - 34325121 34325128 7.0E-06 AGATAAGA 8 V_TAL1_01_M01591 TRANSFAC + 34327836 34327848 8.0E-06 CTGCCTTTTCTTC 13 V_CPHX_01_M01478 TRANSFAC - 34325056 34325069 2.0E-06 CTGATAGAATCACA 14 V_TCF7_04_M02921 TRANSFAC + 34326889 34326903 1.0E-06 ATTTTTTAAAAATAA 15 V_MTATA_B_M00320 TRANSFAC - 34326503 34326519 4.0E-06 TTATTTAAAATGCCACC 17 V_RSRFC4_01_M00026 TRANSFAC - 34326891 34326906 6.0E-06 ACCTTATTTTTAAAAA 16 V_SATB1_01_M01232 TRANSFAC + 34326892 34326903 6.0E-06 TTTTAAAAATAA 12 V_MEF2_01_M00006 TRANSFAC + 34326892 34326907 1.0E-06 TTTTAAAAATAAGGTT 16 V_MEF2A_05_M01301 TRANSFAC - 34326510 34326521 4.0E-06 TGTTATTTAAAA 12 V_GATA5_03_M02756 TRANSFAC - 34325117 34325133 7.0E-06 TTTGTAGATAAGATTAC 17 V_HMEF2_Q6_M00406 TRANSFAC + 34326892 34326907 9.0E-06 TTTTAAAAATAAGGTT 16 V_GATA6_04_M02757 TRANSFAC - 34325117 34325133 1.0E-06 TTTGTAGATAAGATTAC 17 V_GLIS2_04_M02863 TRANSFAC - 34326888 34326901 5.0E-06 ATTTTTAAAAAATA 14 V_GLIS2_04_M02863 TRANSFAC - 34326891 34326904 2.0E-06 CTTATTTTTAAAAA 14 V_EVI1_03_M00080 TRANSFAC - 34325118 34325128 1.0E-06 AGATAAGATTA 11 V_SMAD1_01_M01590 TRANSFAC - 34327839 34327850 1.0E-05 AAGAAGAAAAGG 12 V_T3RALPHA_Q6_M01724 TRANSFAC + 34326486 34326496 8.0E-06 CATGAGGTCAG 11 V_OCT4_01_M01125 TRANSFAC - 34326510 34326524 7.0E-06 TGTTGTTATTTAAAA 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.