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LRRC39 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 127495 leucine rich repeat containing 39 chr1 - 100643329 - 100648829 100643829 Transcription Factor Binding Sites   Download all TFBS in the LRRC39 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints PITX3_homeodomain_DBD_monomeric_9_1 SELEX + 100642660 100642668 5.0E-06 CTTAATCCC 9 BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 100643938 100643954 6.0E-06 ACATTATAAAACTATCA 17 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 100643821 100643832 1.0E-06 ACTAAAATTAGA 12 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 100643821 100643832 2.0E-06 ACTAAAATTAGA 12 FOXD2_forkhead_DBD_dimeric_14_1 SELEX - 100643648 100643661 7.0E-06 CAAAAACATTTTTC 14 Pax4_MA0068.1 JASPAR + 100643664 100643693 0.0E+00 AAATACTTACCATTGTCAAATACTTACCAC 30 Pax4_MA0068.1 JASPAR - 100643720 100643749 2.0E-06 AAAAAATTTCCCCCTGCAATCTACTCTTAA 30 PITX1_homeodomain_full_monomeric_8_1 SELEX + 100642661 100642668 1.0E-05 TTAATCCC 8 MEF2B_MADS_full_dimeric_12_1 SELEX - 100643821 100643832 2.0E-06 ACTAAAATTAGA 12 MEF2A_MA0052.1 JASPAR + 100643822 100643831 6.0E-06 CTAATTTTAG 10 NFATC1_NFAT_full_dimeric_20_1 SELEX + 100643644 100643663 5.0E-06 AAAGGAAAAATGTTTTTGAA 20 NFATC1_NFAT_full_dimeric_20_1 SELEX + 100643736 100643755 1.0E-06 GGGGGAAATTTTTTTTTCAG 20 NFATC1_NFAT_full_dimeric_20_1 SELEX - 100643737 100643756 1.0E-06 ACTGAAAAAAAAATTTCCCC 20 NFATC1_NFAT_full_dimeric_20_1 SELEX - 100643738 100643757 7.0E-06 CACTGAAAAAAAAATTTCCC 20 SOX7_HMG_full_dimeric_16_1 SELEX - 100643665 100643680 3.0E-06 GACAATGGTAAGTATT 16 RHOXF1_homeodomain_full_monomeric_8_1 SELEX + 100642661 100642668 1.0E-05 TTAATCCC 8 TFAP4_bHLH_full_dimeric_10_1 SELEX + 100643885 100643894 2.0E-06 ATCAGCTGAT 10 TFAP4_bHLH_full_dimeric_10_1 SELEX - 100643885 100643894 2.0E-06 ATCAGCTGAT 10 TFEC_bHLH_DBD_dimeric_10_1 SELEX + 100643860 100643869 8.0E-06 ATCACATGAG 10 SOX18_HMG_full_dimeric_15_3 SELEX + 100641570 100641584 8.0E-06 AGCAATTCCATTCAA 15 GSC2_homeodomain_DBD_monomeric_10_1 SELEX + 100642660 100642669 2.0E-06 CTTAATCCCC 10 Sox2_MA0143.1 JASPAR - 100643634 100643648 6.0E-06 CCTTTCTTCTTCACA 15 Sox1_HMG_DBD_dimeric_15_2 SELEX + 100641570 100641584 1.0E-05 AGCAATTCCATTCAA 15 FOXO1_forkhead_DBD_dimeric_14_1 SELEX - 100643647 100643660 6.0E-06 AAAAACATTTTTCC 14 V_FOXP1_01_M00987 TRANSFAC - 100643182 100643201 7.0E-06 ATATTTTTATTCGAGTATTT 20 V_ZFP187_03_M02830 TRANSFAC + 100641531 100641544 0.0E+00 TTATGTACTAATAT 14 V_TCF3_01_M01594 TRANSFAC - 100643636 100643648 7.0E-06 CCTTTCTTCTTCA 13 V_OBOX5_05_M03066 TRANSFAC - 100642656 100642672 3.0E-06 GGTGGGGATTAAGTTCC 17 V_OBOX1_01_M01450 TRANSFAC - 100642657 100642673 9.0E-06 AGGTGGGGATTAAGTTC 17 V_FOXD3_01_M00130 TRANSFAC + 100643741 100643752 9.0E-06 AAATTTTTTTTT 12 V_BCL6_01_M01183 TRANSFAC - 100643650 100643665 4.0E-06 TTTTCAAAAACATTTT 16 V_ZFP740_04_M02938 TRANSFAC - 100643729 100643745 5.0E-06 AATTTCCCCCTGCAATC 17 V_ZFP740_04_M02938 TRANSFAC - 100643730 100643746 8.0E-06 AAATTTCCCCCTGCAAT 17 V_MEF2_02_M00231 TRANSFAC - 100643817 100643838 0.0E+00 CCATGAACTAAAATTAGAACTA 22 V_POU1F1_Q6_M00744 TRANSFAC + 100643767 100643776 8.0E-06 ATGATTAAAA 10 V_SOX11_04_M02899 TRANSFAC + 100643004 100643017 1.0E-05 GAAATTGTTGAGAG 14 V_TCFAP2E_04_M02926 TRANSFAC + 100643185 100643198 4.0E-06 TACTCGAATAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 100643744 100643757 0.0E+00 CACTGAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 100643745 100643758 6.0E-06 ACACTGAAAAAAAA 14 V_ELF4_04_M02850 TRANSFAC - 100643740 100643756 1.0E-06 ACTGAAAAAAAAATTTC 17 V_OBOX5_02_M01480 TRANSFAC - 100642656 100642672 3.0E-06 GGTGGGGATTAAGTTCC 17 V_HELIOSA_02_M01004 TRANSFAC + 100643643 100643653 1.0E-05 GAAAGGAAAAA 11 V_ARID5A_03_M02736 TRANSFAC + 100641538 100641551 0.0E+00 CTAATATTGAAGAT 14 V_TEF_Q6_M00672 TRANSFAC - 100643941 100643952 4.0E-06 ATAGTTTTATAA 12 V_IRF3_Q3_M01279 TRANSFAC - 100643644 100643656 5.0E-06 ACATTTTTCCTTT 13 V_RFX4_04_M02893 TRANSFAC - 100643787 100643801 1.0E-05 TCACTTGGTTACAGC 15 V_OBOX2_01_M01364 TRANSFAC - 100642657 100642673 2.0E-06 AGGTGGGGATTAAGTTC 17 V_MEF2_03_M00232 TRANSFAC - 100643817 100643838 1.0E-06 CCATGAACTAAAATTAGAACTA 22 V_HOX13_01_M00023 TRANSFAC - 100641526 100641555 6.0E-06 GCTTATCTTCAATATTAGTACATAAGTATT 30 V_PITX3_01_M01343 TRANSFAC - 100642656 100642671 6.0E-06 GTGGGGATTAAGTTCC 16 V_TCF7_03_M02817 TRANSFAC + 100643636 100643652 7.0E-06 TGAAGAAGAAAGGAAAA 17 V_NKX3A_01_M00451 TRANSFAC - 100641525 100641536 3.0E-06 ACATAAGTATTT 12 V_POU6F1_01_M00465 TRANSFAC - 100643893 100643903 5.0E-06 ACATACATTAT 11 V_HBP1_04_M02866 TRANSFAC + 100643668 100643684 7.0E-06 ACTTACCATTGTCAAAT 17 V_OBOX2_02_M03064 TRANSFAC - 100642657 100642673 2.0E-06 AGGTGGGGATTAAGTTC 17 V_GATA1_01_M00075 TRANSFAC - 100643947 100643956 6.0E-06 CCTGATAGTT 10 V_NKX22_01_M00485 TRANSFAC - 100641525 100641534 4.0E-06 ATAAGTATTT 10 V_DOBOX5_01_M01463 TRANSFAC - 100642656 100642672 4.0E-06 GGTGGGGATTAAGTTCC 17 V_OTX2_01_M01387 TRANSFAC - 100642656 100642672 2.0E-06 GGTGGGGATTAAGTTCC 17 V_TCF4_Q5_M00671 TRANSFAC - 100641580 100641587 1.0E-05 CCTTTGAA 8 V_RSRFC4_01_M00026 TRANSFAC + 100643819 100643834 1.0E-06 GTTCTAATTTTAGTTC 16 V_RSRFC4_01_M00026 TRANSFAC - 100643819 100643834 9.0E-06 GAACTAAAATTAGAAC 16 V_PLZF_02_M01075 TRANSFAC - 100643814 100643842 8.0E-06 TTGTCCATGAACTAAAATTAGAACTAGGC 29 V_SOX2_01_M02246 TRANSFAC - 100643634 100643648 6.0E-06 CCTTTCTTCTTCACA 15 V_SRF_06_M02916 TRANSFAC - 100643740 100643756 2.0E-06 ACTGAAAAAAAAATTTC 17 V_SRF_06_M02916 TRANSFAC - 100643741 100643757 2.0E-06 CACTGAAAAAAAAATTT 17 V_RFX3_05_M02892 TRANSFAC - 100643783 100643805 1.0E-06 CATTTCACTTGGTTACAGCTGAC 23 V_PAX4_02_M00377 TRANSFAC - 100643739 100643749 5.0E-06 AAAAAATTTCC 11 V_PITX2_01_M01447 TRANSFAC - 100642656 100642672 9.0E-06 GGTGGGGATTAAGTTCC 17 V_TFE_Q6_M01029 TRANSFAC - 100643861 100643868 1.0E-05 TCATGTGA 8 V_OBOX3_02_M03065 TRANSFAC - 100642657 100642673 3.0E-06 AGGTGGGGATTAAGTTC 17 V_TCF3_05_M02920 TRANSFAC + 100643186 100643200 1.0E-06 ACTCGAATAAAAATA 15 V_TCF3_05_M02920 TRANSFAC - 100643742 100643756 1.0E-06 ACTGAAAAAAAAATT 15 V_ATATA_B_M00311 TRANSFAC - 100641529 100641538 6.0E-06 GTACATAAGT 10 V_OTX1_01_M01366 TRANSFAC - 100642656 100642672 1.0E-06 GGTGGGGATTAAGTTCC 17 V_OBOX3_01_M01466 TRANSFAC - 100642657 100642673 3.0E-06 AGGTGGGGATTAAGTTC 17 V_SMAD1_01_M01590 TRANSFAC + 100643638 100643649 1.0E-06 AAGAAGAAAGGA 12 V_CEBPA_Q6_M01866 TRANSFAC - 100643175 100643187 6.0E-06 GTATTTAGCAAAA 13 V_NANOG_02_M01247 TRANSFAC + 100643634 100643653 0.0E+00 TGTGAAGAAGAAAGGAAAAA 20

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