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CNTFR Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 1271 ciliary neurotrophic factor receptor chr9 - 34589235 - 34595138 34589735 Transcription Factor Binding Sites   Download all TFBS in the CNTFR promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SP8_C2H2_DBD_monomeric_12_1 SELEX + 34589990 34590001 9.0E-06 CCCACTCCCACT 12 GMEB2_SAND_DBD_dimeric_8_2 SELEX + 34593106 34593113 7.0E-06 TTACGTAA 8 GMEB2_SAND_DBD_dimeric_8_2 SELEX - 34593106 34593113 7.0E-06 TTACGTAA 8 Rxrb_nuclearreceptor_DBD_dimeric_14_1 SELEX + 34592117 34592130 6.0E-06 GGGGGCAAAGTTGA 14 ESRRA_nuclearreceptor_DBD_dimeric_19_1 SELEX - 34591545 34591563 3.0E-06 CCAGGGCATCTGGAGGTCA 19 SOX8_HMG_full_dimeric_17_1 SELEX - 34585414 34585430 9.0E-06 AAACTATGGTAGTGACT 17 EWSR1-FLI1_MA0149.1 JASPAR - 34591001 34591018 8.0E-06 GGAAGGATGTGAGGAAAC 18 NFIL3_MA0025.1 JASPAR - 34593103 34593113 1.0E-05 TTACGTAACTG 11 ESRRG_nuclearreceptor_full_dimeric_18_1 SELEX - 34591545 34591562 1.0E-06 CAGGGCATCTGGAGGTCA 18 Rarb_nuclearreceptor_DBD_dimeric_17_1 SELEX - 34591545 34591561 2.0E-06 AGGGCATCTGGAGGTCA 17 SP1_MA0079.2 JASPAR + 34589845 34589854 3.0E-06 CCCCTCCCCC 10 RARA_nuclearreceptor_full_dimeric_17_1 SELEX - 34591545 34591561 1.0E-06 AGGGCATCTGGAGGTCA 17 CTCF_C2H2_full_monomeric_17_1 SELEX + 34591855 34591871 2.0E-06 AGCGACACCTGGCGGAC 17 NR2C2_nuclearreceptor_DBD_dimeric_14_1 SELEX + 34592117 34592130 1.0E-05 GGGGGCAAAGTTGA 14 ZSCAN4_C2H2_full_monomeric_15_1 SELEX + 34593048 34593062 6.0E-06 CACACACGCTCTCAA 15 INSM1_MA0155.1 JASPAR + 34591159 34591170 1.0E-05 TGGCAGGGGTCG 12 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 34590250 34590264 9.0E-06 CGAGAGGGAGAGTGA 15 HNF4A_MA0114.1 JASPAR + 34592118 34592130 8.0E-06 GGGGCAAAGTTGA 13 TFAP2A_MA0003.1 JASPAR - 34590201 34590209 8.0E-06 GCCCTAGGG 9 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX + 34593156 34593166 1.0E-05 CTTCCTCACAC 11 RORA_nuclearreceptor_DBD_dimeric_20_1 SELEX - 34591545 34591564 1.0E-06 ACCAGGGCATCTGGAGGTCA 20 HNF4A_nuclearreceptor_full_dimeric_14_1 SELEX + 34592117 34592130 5.0E-06 GGGGGCAAAGTTGA 14 TBX1_TBX_DBD_dimeric_20_1 SELEX - 34586478 34586497 4.0E-06 GGGTGTGAAGATTGGAGGGA 20 RREB1_MA0073.1 JASPAR - 34593069 34593088 5.0E-06 CCCCAACCCGCCAAACCCCA 20 SOX9_HMG_full_dimeric_17_1 SELEX - 34585414 34585430 8.0E-06 AAACTATGGTAGTGACT 17 Zfx_MA0146.1 JASPAR - 34591919 34591932 3.0E-06 GTGGCCGAGGCCTC 14 V_AP2ALPHA_01_M00469 TRANSFAC - 34590201 34590209 8.0E-06 GCCCTAGGG 9 V_NFAT_Q4_01_M00935 TRANSFAC - 34591989 34591998 3.0E-06 GAGGAAAATT 10 V_MEQ_01_M02049 TRANSFAC + 34589094 34589102 9.0E-06 GACACACAT 9 V_OSR1_03_M02784 TRANSFAC - 34585440 34585455 3.0E-06 AGCTACAGTAGCAGGA 16 V_TAXCREB_01_M00114 TRANSFAC - 34593105 34593119 7.0E-06 GGGCGTTTACGTAAC 15 RXR_RAR_DR5_MA0159.1 JASPAR - 34591545 34591561 2.0E-06 AGGGCATCTGGAGGTCA 17 V_ZFX_01_M01593 TRANSFAC - 34591914 34591929 2.0E-06 GCCGAGGCCTCAGCGC 16 V_LMAF_Q2_M01139 TRANSFAC + 34591797 34591805 6.0E-06 GGTCAGCAG 9 V_EOMES_03_M02747 TRANSFAC - 34586485 34586501 2.0E-06 GGAGGGGTGTGAAGATT 17 V_ZFP740_03_M02834 TRANSFAC + 34590402 34590417 1.0E-05 CCCCAACCCCCACTTT 16 V_IRF2_Q6_M01882 TRANSFAC - 34585429 34585444 7.0E-06 CAGGAACTGAAATTAA 16 V_SP1_03_M02281 TRANSFAC + 34589845 34589854 3.0E-06 CCCCTCCCCC 10 V_HNF4A_03_M02220 TRANSFAC + 34592118 34592130 8.0E-06 GGGGCAAAGTTGA 13 V_PPAR_DR1_Q2_M00763 TRANSFAC - 34592118 34592130 4.0E-06 TCAACTTTGCCCC 13 V_GM497_04_M02864 TRANSFAC + 34589051 34589066 9.0E-06 ACATGCACACACACAC 16 V_WT1_Q6_01_M02036 TRANSFAC + 34589921 34589930 4.0E-06 CGCCCCCGCC 10 V_GCM1_04_M02862 TRANSFAC - 34590443 34590459 1.0E-05 TAGCAATAGGGGAGAGG 17 V_TCFAP2C_03_M02821 TRANSFAC + 34591058 34591072 9.0E-06 AATGCCTCAGGGACT 15 V_TCFAP2C_03_M02821 TRANSFAC - 34591058 34591072 5.0E-06 AGTCCCTGAGGCATT 15 V_ZBP89_Q4_M01816 TRANSFAC + 34591994 34592003 6.0E-06 TCCTCCCCCC 10 V_RXRA_04_M02895 TRANSFAC + 34585420 34585435 9.0E-06 TACCATAGTTTAATTT 16 V_EVI1_01_M00078 TRANSFAC - 34585452 34585467 5.0E-06 AGCTAAGACTAGAGCT 16 V_MAZ_Q6_01_M02023 TRANSFAC - 34589782 34589795 1.0E-05 GAAGGAGGGAGGGA 14 V_MAZ_Q6_01_M02023 TRANSFAC - 34589841 34589854 1.0E-06 GGGGGAGGGGAGCG 14 V_MAZ_Q6_01_M02023 TRANSFAC - 34592101 34592114 1.0E-06 GGCGGTGGGGAGGG 14 V_IRF_Q6_M00772 TRANSFAC + 34585428 34585442 3.0E-06 TTTAATTTCAGTTCC 15 V_ZBRK1_01_M01105 TRANSFAC + 34585728 34585742 1.0E-06 GGGCCACAGGAGTTT 15 V_AHRARNT_02_M00237 TRANSFAC - 34590008 34590026 5.0E-06 GCAGAGCGCGTGCCAGTGC 19 V_RREB1_01_M00257 TRANSFAC + 34590402 34590415 6.0E-06 CCCCAACCCCCACT 14 V_HNF4_DR1_Q3_M00764 TRANSFAC - 34592118 34592130 6.0E-06 TCAACTTTGCCCC 13 V_MZF1_02_M00084 TRANSFAC - 34593137 34593149 9.0E-06 GGGTGAGGGGGAG 13 V_INSM1_01_M02268 TRANSFAC + 34591159 34591170 1.0E-05 TGGCAGGGGTCG 12 V_VBP_01_M00228 TRANSFAC + 34593105 34593114 7.0E-06 GTTACGTAAA 10 V_GCNF_01_M00526 TRANSFAC - 34591537 34591554 8.0E-06 CTGGAGGTCAAGTCCGTT 18 V_TAL1_01_M01591 TRANSFAC + 34589788 34589800 9.0E-06 CCTCCTTCTCTCG 13 V_EOMES_04_M02851 TRANSFAC - 34591853 34591868 7.0E-06 CGCCAGGTGTCGCTTC 16 V_DR1_Q3_M00762 TRANSFAC + 34592118 34592130 9.0E-06 GGGGCAAAGTTGA 13 V_CAAT_C_M00200 TRANSFAC + 34586482 34586506 2.0E-06 TCCAATCTTCACACCCCTCCCATCC 25 V_FPM315_01_M01587 TRANSFAC - 34589760 34589771 0.0E+00 GAGGGAGGAGGA 12 V_OSR2_03_M02785 TRANSFAC - 34585440 34585455 5.0E-06 AGCTACAGTAGCAGGA 16 V_ZFP281_01_M01597 TRANSFAC - 34590403 34590413 9.0E-06 TGGGGGTTGGG 11 V_RXR_RAR_01_M02272 TRANSFAC - 34591545 34591561 2.0E-06 AGGGCATCTGGAGGTCA 17 V_IRF1_Q6_01_M01881 TRANSFAC + 34585430 34585443 3.0E-06 TAATTTCAGTTCCT 14 V_CREBP1_01_M00040 TRANSFAC + 34593106 34593113 7.0E-06 TTACGTAA 8 V_CREBP1_01_M00040 TRANSFAC - 34593106 34593113 7.0E-06 TTACGTAA 8 V_TCFAP2A_03_M02819 TRANSFAC + 34591058 34591072 9.0E-06 AATGCCTCAGGGACT 15 V_TCFAP2A_03_M02819 TRANSFAC - 34591058 34591072 6.0E-06 AGTCCCTGAGGCATT 15 V_EWSR1FLI1_01_M02252 TRANSFAC - 34591001 34591018 8.0E-06 GGAAGGATGTGAGGAAAC 18 V_HLF_01_M00260 TRANSFAC + 34593105 34593114 7.0E-06 GTTACGTAAA 10 V_SOX15_04_M02903 TRANSFAC - 34585428 34585442 4.0E-06 GGAACTGAAATTAAA 15 V_AP2ALPHA_02_M01045 TRANSFAC + 34591058 34591072 3.0E-06 AATGCCTCAGGGACT 15 V_TCFAP2E_03_M02822 TRANSFAC + 34591058 34591072 1.0E-05 AATGCCTCAGGGACT 15 V_TCFAP2E_03_M02822 TRANSFAC - 34591058 34591072 1.0E-05 AGTCCCTGAGGCATT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.