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CNTF Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 1270 ciliary neurotrophic factor chr11 + 58385145 - 58390645 58390145 Transcription Factor Binding Sites   Download all TFBS in the CNTF promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXO4_forkhead_DBD_dimeric_14_1 SELEX + 58389238 58389251 8.0E-06 GAAAGCATGTTGTC 14 FOXO4_forkhead_DBD_dimeric_14_1 SELEX - 58389238 58389251 7.0E-06 GACAACATGCTTTC 14 TBX1_TBX_DBD_dimeric_20_2 SELEX - 58393490 58393509 5.0E-06 TACACACACCCATGTGAGAA 20 MYF6_bHLH_full_dimeric_10_1 SELEX - 58392764 58392773 9.0E-06 AGCAGCTGTT 10 SOX10_HMG_full_dimeric_14_1 SELEX + 58394734 58394747 4.0E-06 TGAATGTGTAGACA 14 IRF7_IRF_DBD_dimeric_14_1 SELEX - 58392670 58392683 5.0E-06 TCTAAAGTGAAAGG 14 SRY_HMG_DBD_dimeric_15_1 SELEX - 58389928 58389942 3.0E-06 TTCTATGTCATTGTT 15 FOXL1_forkhead_full_dimeric_13_1 SELEX + 58393811 58393823 7.0E-06 TGTAAACACACAA 13 FOXL1_forkhead_full_dimeric_13_1 SELEX - 58394755 58394767 4.0E-06 TTCAAATAAACAT 13 SOX8_HMG_DBD_dimeric_16_1 SELEX - 58392697 58392712 7.0E-06 AAAGAGGTGCAGTGAT 16 SOX8_HMG_DBD_dimeric_16_1 SELEX - 58394744 58394759 6.0E-06 AACATGATGCAATGTC 16 FOXO3_MA0157.1 JASPAR + 58393811 58393818 7.0E-06 TGTAAACA 8 ZNF435_C2H2_full_dimeric_18_1 SELEX - 58393803 58393820 3.0E-06 TGTGTTTACAGAATCTCT 18 SOX8_HMG_full_dimeric_17_1 SELEX + 58395107 58395123 7.0E-06 AAGGAATTGCATGGATG 17 POU1F1_POU_DBD_monomeric_14_1 SELEX - 58393590 58393603 8.0E-06 CAAATGCATATTAG 14 SOX8_HMG_DBD_dimeric_14_1 SELEX + 58394734 58394747 4.0E-06 TGAATGTGTAGACA 14 LEF1_HMG_DBD_monomeric_15_1 SELEX + 58394676 58394690 6.0E-06 AAAGATAAAGGGGAA 15 ETV2_ETS_DBD_monomeric_11_1 SELEX - 58389297 58389307 8.0E-06 AACAGGAAACA 11 Foxq1_MA0040.1 JASPAR + 58394753 58394763 7.0E-06 TCATGTTTATT 11 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 58394756 58394766 8.0E-06 TCAAATAAACA 11 NR2E1_nuclearreceptor_full_dimeric_14_1 SELEX + 58393710 58393723 0.0E+00 AAGTTAAAAAGTCA 14 Ascl2_bHLH_DBD_dimeric_10_1 SELEX + 58392764 58392773 1.0E-06 AACAGCTGCT 10 Ascl2_bHLH_DBD_dimeric_10_1 SELEX - 58392764 58392773 3.0E-06 AGCAGCTGTT 10 FOXI1_MA0042.1 JASPAR + 58394753 58394764 0.0E+00 TCATGTTTATTT 12 NFAT5_NFAT_DBD_dimeric_14_1 SELEX + 58393696 58393709 8.0E-06 GTGGAATACTACTC 14 Tcf21_bHLH_DBD_dimeric_14_1 SELEX + 58392762 58392775 2.0E-06 AAAACAGCTGCTGT 14 ATF4_bZIP_DBD_dimeric_13_1 SELEX - 58394746 58394758 2.0E-06 ACATGATGCAATG 13 Atf4_bZIP_DBD_dimeric_14_1 SELEX - 58394746 58394759 0.0E+00 AACATGATGCAATG 14 SOX9_HMG_full_dimeric_16_3 SELEX + 58394733 58394748 7.0E-06 CTGAATGTGTAGACAT 16 NFATC1_NFAT_full_dimeric_15_1 SELEX + 58392870 58392884 0.0E+00 ATTCCATTTTGGAAA 15 NFATC1_NFAT_full_dimeric_15_1 SELEX - 58392870 58392884 0.0E+00 TTTCCAAAATGGAAT 15 SP1_C2H2_DBD_monomeric_11_1 SELEX - 58390091 58390101 7.0E-06 ACCCCACCCCC 11 MYBL1_MYB_DBD_dimeric_17_1 SELEX - 58392297 58392313 1.0E-05 GTGGGTTAGAAAGGTTA 17 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 58394756 58394766 3.0E-06 TCAAATAAACA 11 SOX7_HMG_full_dimeric_17_1 SELEX + 58389927 58389943 8.0E-06 AAACAATGACATAGAAA 17 ZSCAN4_C2H2_full_monomeric_15_1 SELEX + 58393630 58393644 8.0E-06 CACACACACGTACAT 15 POU3F1_POU_DBD_monomeric_12_1 SELEX - 58393591 58393602 9.0E-06 AAATGCATATTA 12 Myf_MA0055.1 JASPAR + 58392763 58392774 1.0E-06 AAACAGCTGCTG 12 Sox3_HMG_DBD_dimeric_17_1 SELEX + 58389927 58389943 2.0E-06 AAACAATGACATAGAAA 17 FOXO6_forkhead_DBD_dimeric_14_1 SELEX + 58389238 58389251 5.0E-06 GAAAGCATGTTGTC 14 MSC_bHLH_full_dimeric_10_1 SELEX + 58392764 58392773 4.0E-06 AACAGCTGCT 10 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 58394772 58394784 6.0E-06 ATAAATAGAAAAA 13 RREB1_MA0073.1 JASPAR + 58393817 58393836 9.0E-06 CACACAAACACACACACACA 20 IRF2_MA0051.1 JASPAR - 58392665 58392682 8.0E-06 CTAAAGTGAAAGGCACAT 18 V_DMRT4_01_M01149 TRANSFAC + 58393555 58393567 6.0E-06 ATTGTAACAGTTC 13 V_MEQ_01_M02049 TRANSFAC + 58393823 58393831 7.0E-06 AACACACAC 9 V_FOXP1_01_M00987 TRANSFAC - 58393814 58393833 0.0E+00 GTGTGTGTGTTTGTGTGTTT 20 V_FOXP1_01_M00987 TRANSFAC - 58393822 58393841 5.0E-06 GTGTGTGTGTGTGTGTGTTT 20 V_FOXP1_01_M00987 TRANSFAC - 58393834 58393853 5.0E-06 ATGTGTGTGTGTGTGTGTGT 20 V_FOXP1_01_M00987 TRANSFAC - 58393836 58393855 4.0E-06 CTATGTGTGTGTGTGTGTGT 20 V_CEBPG_Q6_M00622 TRANSFAC - 58394760 58394772 4.0E-06 TCCATTTCAAATA 13 V_FREAC7_01_M00293 TRANSFAC - 58394752 58394767 0.0E+00 TTCAAATAAACATGAT 16 V_FREAC7_01_M00293 TRANSFAC + 58394767 58394782 9.0E-06 AATGGATAAATAGAAA 16 V_POU3F3_01_M03090 TRANSFAC - 58393589 58393605 1.0E-06 CACAAATGCATATTAGA 17 V_FOXO3_02_M02270 TRANSFAC + 58393811 58393818 7.0E-06 TGTAAACA 8 V_XFD1_01_M00267 TRANSFAC - 58394752 58394765 3.0E-06 CAAATAAACATGAT 14 V_FOXA2_04_M02749 TRANSFAC + 58393807 58393823 8.0E-06 ATTCTGTAAACACACAA 17 V_DMRT3_01_M01148 TRANSFAC - 58393553 58393567 7.0E-06 GAACTGTTACAATGC 15 V_SOX30_03_M02804 TRANSFAC - 58392820 58392835 3.0E-06 TATGAACAATAAATCC 16 V_FOXD3_01_M00130 TRANSFAC + 58394753 58394764 9.0E-06 TCATGTTTATTT 12 V_NKX29_01_M01352 TRANSFAC - 58392947 58392963 1.0E-06 TAGTGAGTACTTAAAAA 17 V_NKX29_01_M01352 TRANSFAC + 58392948 58392964 6.0E-06 TTTTAAGTACTCACTAA 17 V_FOXO4_02_M00476 TRANSFAC + 58395089 58395102 5.0E-06 ATCTTGTTTTCCTG 14 V_OCT1_Q5_01_M00930 TRANSFAC + 58393591 58393601 9.0E-06 TAATATGCATT 11 V_MEF2_02_M00231 TRANSFAC - 58389188 58389209 7.0E-06 CATGCTTCTTAAAATAAGAGAA 22 V_MEF2_02_M00231 TRANSFAC - 58394659 58394680 8.0E-06 TCTTTTTCTAAGATTAGCTTTC 22 V_OCTAMER_01_M01324 TRANSFAC - 58393589 58393605 1.0E-06 CACAAATGCATATTAGA 17 V_IRF2_Q6_M01882 TRANSFAC - 58392668 58392683 3.0E-06 TCTAAAGTGAAAGGCA 16 V_POU2F3_01_M01476 TRANSFAC - 58393589 58393604 9.0E-06 ACAAATGCATATTAGA 16 V_POU1F1_Q6_M00744 TRANSFAC + 58394768 58394777 4.0E-06 ATGGATAAAT 10 V_CEBP_Q2_M00190 TRANSFAC + 58394745 58394758 4.0E-06 ACATTGCATCATGT 14 V_HNF3_Q6_01_M01012 TRANSFAC - 58394766 58394783 1.0E-06 TTTTCTATTTATCCATTT 18 V_FOXJ1_03_M02750 TRANSFAC + 58393809 58393824 3.0E-06 TCTGTAAACACACAAA 16 V_SP1_02_M01303 TRANSFAC + 58390092 58390102 5.0E-06 GGGGTGGGGTG 11 V_PU1_Q4_M01172 TRANSFAC - 58394681 58394699 2.0E-06 ACTGCTCATTTCCCCTTTA 19 V_AP4_Q6_01_M00927 TRANSFAC + 58392764 58392772 1.0E-05 AACAGCTGC 9 V_LDSPOLYA_B_M00317 TRANSFAC - 58392569 58392584 0.0E+00 AGCCTGTTTTCTCATC 16 V_CEBPB_01_M00109 TRANSFAC - 58394745 58394758 4.0E-06 ACATGATGCAATGT 14 V_MEF2A_Q6_M02024 TRANSFAC + 58389194 58389203 1.0E-06 TATTTTAAGA 10 V_AR_03_M00956 TRANSFAC + 58389289 58389315 5.0E-06 GCGTTGGGTGTTTCCTGTTCTTTGGAA 27 V_STAT4_Q4_M01666 TRANSFAC - 58389188 58389201 4.0E-06 TTAAAATAAGAGAA 14 V_TAL1_GATA1_01_M02243 TRANSFAC - 58385629 58385646 0.0E+00 ATGGTATTTGAAGATAAG 18 V_BACH1_01_M00495 TRANSFAC + 58393424 58393438 4.0E-06 ACCATGAGTCAGGGC 15 V_SOX13_03_M02797 TRANSFAC - 58392821 58392836 1.0E-06 GTATGAACAATAAATC 16 V_SOX7_03_M02807 TRANSFAC + 58389921 58389942 3.0E-06 AAAGCAAAACAATGACATAGAA 22 V_SOX7_03_M02807 TRANSFAC - 58392817 58392838 0.0E+00 AAGTATGAACAATAAATCCTGA 22 V_HELIOSA_02_M01004 TRANSFAC + 58392876 58392886 4.0E-06 TTTTGGAAAAT 11 V_MYF_01_M01302 TRANSFAC + 58392763 58392774 1.0E-06 AAACAGCTGCTG 12 V_FREAC3_01_M00291 TRANSFAC + 58393807 58393822 2.0E-06 ATTCTGTAAACACACA 16 V_SOX8_04_M02912 TRANSFAC + 58395136 58395149 2.0E-06 GCATTCATGTAAGA 10 V_SOX7_04_M02911 TRANSFAC - 58394621 58394642 5.0E-06 GTGCATATTGTATGCTTCCTGA 22 V_RFX1_01_M00280 TRANSFAC - 58389275 58389291 4.0E-06 CGCTAACTTGGTAACAT 17 V_IRX4_01_M01410 TRANSFAC + 58394715 58394731 1.0E-06 AATCAACATGTATGAGA 17 V_IRF3_Q3_M01279 TRANSFAC - 58389921 58389933 9.0E-06 ATTGTTTTGCTTT 13 V_IRF3_Q3_M01279 TRANSFAC + 58392668 58392680 3.0E-06 TGCCTTTCACTTT 13 V_HNF3_Q6_M00791 TRANSFAC + 58394768 58394780 9.0E-06 ATGGATAAATAGA 13 V_HNF1_Q6_01_M01011 TRANSFAC - 58393708 58393728 8.0E-06 TTCTGTGACTTTTTAACTTGA 21 V_TTF1_Q6_M00794 TRANSFAC - 58389249 58389260 4.0E-06 CACTCAAGTGAC 12 V_NKX25_Q5_M01043 TRANSFAC + 58389248 58389257 3.0E-06 TGTCACTTGA 10 V_MEF2_03_M00232 TRANSFAC - 58389188 58389209 9.0E-06 CATGCTTCTTAAAATAAGAGAA 22 V_SOX18_03_M02801 TRANSFAC + 58392822 58392837 5.0E-06 ATTTATTGTTCATACT 16 V_RFXDC2_03_M02790 TRANSFAC - 58389905 58389919 5.0E-06 GCACTTAGCAACAAG 15 V_NFE4_Q5_M02105 TRANSFAC - 58393762 58393773 5.0E-06 CACCCTCTCCTC 12 V_GR_01_M00955 TRANSFAC + 58389289 58389315 5.0E-06 GCGTTGGGTGTTTCCTGTTCTTTGGAA 27 Tal1_Gata1_MA0140.1 JASPAR - 58385629 58385646 0.0E+00 ATGGTATTTGAAGATAAG 18 V_ERR1_Q3_M01841 TRANSFAC + 58389930 58389944 9.0E-06 CAATGACATAGAAAC 15 V_MEF2_04_M00233 TRANSFAC - 58389188 58389209 9.0E-06 CATGCTTCTTAAAATAAGAGAA 22 V_DAX1_01_M01248 TRANSFAC - 58389895 58389914 3.0E-06 TAGCAACAAGGTCACTATCA 20 V_RREB1_01_M00257 TRANSFAC + 58393818 58393831 6.0E-06 ACACAAACACACAC 14 V_AP1_C_M00199 TRANSFAC + 58393427 58393435 3.0E-06 ATGAGTCAG 9 V_XFD2_01_M00268 TRANSFAC - 58394752 58394765 5.0E-06 CAAATAAACATGAT 14 V_HFH1_01_M00129 TRANSFAC + 58394753 58394764 1.0E-06 TCATGTTTATTT 12 V_HNF4A_Q6_01_M02016 TRANSFAC - 58392904 58392918 8.0E-06 TTCCAAAGTTCAGAA 15 V_IRX3_01_M01318 TRANSFAC - 58394714 58394730 7.0E-06 CTCATACATGTTGATTT 17 V_IRX3_01_M01318 TRANSFAC + 58394715 58394731 3.0E-06 AATCAACATGTATGAGA 17 V_SOX11_03_M02795 TRANSFAC + 58389923 58389939 4.0E-06 AGCAAAACAATGACATA 17 V_NR1B1_Q6_M02110 TRANSFAC - 58392905 58392914 6.0E-06 AAAGTTCAGA 10 V_SOX9_B1_M00410 TRANSFAC - 58392822 58392835 3.0E-06 TATGAACAATAAAT 14 V_AP1_Q2_01_M00924 TRANSFAC - 58393423 58393434 0.0E+00 TGACTCATGGTT 12 V_OCT_Q6_M00795 TRANSFAC + 58393591 58393601 8.0E-06 TAATATGCATT 11 V_NKX23_01_M01457 TRANSFAC + 58392948 58392963 0.0E+00 TTTTAAGTACTCACTA 16 V_NKX23_01_M01457 TRANSFAC - 58392948 58392963 4.0E-06 TAGTGAGTACTTAAAA 16 V_IRX5_01_M01472 TRANSFAC - 58394714 58394730 3.0E-06 CTCATACATGTTGATTT 17 V_IRX5_01_M01472 TRANSFAC + 58394715 58394731 1.0E-06 AATCAACATGTATGAGA 17 V_SOX17_04_M02904 TRANSFAC + 58395132 58395148 9.0E-06 TCTTGCATTCATGTAAG 14 V_NKX32_02_M01482 TRANSFAC - 58389908 58389924 7.0E-06 CTTTTGCACTTAGCAAC 17 V_MAF_Q6_01_M00983 TRANSFAC + 58395098 58395108 4.0E-06 TCCTGAGTCAA 11 V_GATA4_Q3_M00632 TRANSFAC + 58394678 58394689 1.0E-06 AGATAAAGGGGA 12 V_HFH8_01_M00294 TRANSFAC + 58394753 58394765 3.0E-06 TCATGTTTATTTG 13 V_IRX3_02_M01485 TRANSFAC - 58394714 58394730 1.0E-05 CTCATACATGTTGATTT 17 V_IRX3_02_M01485 TRANSFAC + 58394715 58394731 4.0E-06 AATCAACATGTATGAGA 17 V_SOX15_03_M02799 TRANSFAC - 58392820 58392836 5.0E-06 GTATGAACAATAAATCC 17 V_POU5F1_01_M01307 TRANSFAC - 58395131 58395140 9.0E-06 AATGCAAGAA 10 V_OSR2_04_M02889 TRANSFAC - 58389195 58389210 9.0E-06 ACATGCTTCTTAAAAT 16 V_OSR2_04_M02889 TRANSFAC + 58390059 58390074 7.0E-06 ATTTGCTACCTCCTCT 16 V_SMAD4_04_M02898 TRANSFAC + 58392889 58392905 6.0E-06 TTAGGCCCGCCAAACTT 17 V_OCT2_01_M01368 TRANSFAC - 58393589 58393604 6.0E-06 ACAAATGCATATTAGA 16 V_FOXL1_02_M02857 TRANSFAC + 58389921 58389936 2.0E-06 AAAGCAAAACAATGAC 16 V_FOXL1_04_M02753 TRANSFAC + 58393807 58393823 1.0E-05 ATTCTGTAAACACACAA 17 V_LUN1_01_M00480 TRANSFAC + 58393869 58393885 2.0E-06 TCCCAGGTTTGTTAGGA 17 V_FOXJ3_06_M02855 TRANSFAC + 58389920 58389936 1.0E-06 AAAAGCAAAACAATGAC 17 V_ZSCAN4_04_M02942 TRANSFAC + 58390033 58390048 6.0E-06 ACAGGCACAAAAATCC 16 V_NKX3A_02_M01383 TRANSFAC - 58392947 58392963 0.0E+00 TAGTGAGTACTTAAAAA 17 V_NKX3A_02_M01383 TRANSFAC + 58392948 58392964 3.0E-06 TTTTAAGTACTCACTAA 17 V_PARP_Q3_M01211 TRANSFAC + 58394670 58394679 3.0E-06 TTAGAAAAAG 10 V_AIRE_01_M00999 TRANSFAC - 58392294 58392319 2.0E-06 TACTTAGTGGGTTAGAAAGGTTAGAA 26 V_TCF7_04_M02921 TRANSFAC - 58392927 58392941 2.0E-06 CTGTATTACTAAACA 15 V_DMRT7_01_M01151 TRANSFAC + 58393556 58393569 7.0E-06 TTGTAACAGTTCAG 14 V_DOBOX5_01_M01463 TRANSFAC + 58392815 58392831 6.0E-06 AGTCAGGATTTATTGTT 17 V_OTX2_01_M01387 TRANSFAC + 58392815 58392831 9.0E-06 AGTCAGGATTTATTGTT 17 V_STAT1STAT1_Q3_M01212 TRANSFAC - 58394757 58394769 8.0E-06 ATTTCAAATAAAC 13 V_FOX_Q2_M00809 TRANSFAC - 58393813 58393825 2.0E-06 GTTTGTGTGTTTA 13 V_E47_01_M00002 TRANSFAC - 58392761 58392775 9.0E-06 ACAGCAGCTGTTTTC 15 V_ZFP281_01_M01597 TRANSFAC + 58390090 58390100 1.0E-06 TGGGGGTGGGG 11 V_E2F_Q4_01_M00919 TRANSFAC + 58392893 58392903 1.0E-05 GCCCGCCAAAC 11 V_OSR1_04_M02888 TRANSFAC - 58389195 58389210 2.0E-06 ACATGCTTCTTAAAAT 16 V_SOX21_04_M02907 TRANSFAC + 58392821 58392837 2.0E-06 GATTTATTGTTCATACT 17 V_IRX2_01_M01405 TRANSFAC - 58394714 58394730 4.0E-06 CTCATACATGTTGATTT 17 V_IRX2_01_M01405 TRANSFAC + 58394715 58394731 1.0E-06 AATCAACATGTATGAGA 17 V_SOX8_03_M02808 TRANSFAC + 58392820 58392836 0.0E+00 GGATTTATTGTTCATAC 17 V_HFH3_01_M00289 TRANSFAC + 58394753 58394765 2.0E-06 TCATGTTTATTTG 13 V_FOXJ2_01_M00422 TRANSFAC - 58394751 58394768 5.0E-06 TTTCAAATAAACATGATG 18 V_FOXJ2_01_M00422 TRANSFAC + 58394766 58394783 5.0E-06 AAATGGATAAATAGAAAA 18 V_SIX6_08_M02897 TRANSFAC - 58394766 58394782 7.0E-06 TTTCTATTTATCCATTT 17 V_YY1_01_M00059 TRANSFAC + 58392868 58392884 4.0E-06 AGATTCCATTTTGGAAA 17 V_SOX2_Q6_M01272 TRANSFAC - 58389924 58389939 0.0E+00 TATGTCATTGTTTTGC 16 V_IRF1_01_M00062 TRANSFAC + 58389919 58389931 2.0E-06 CAAAAGCAAAACA 13 V_RFX3_04_M02788 TRANSFAC - 58389901 58389923 1.0E-06 TTTTGCACTTAGCAACAAGGTCA 23 V_PITX2_01_M01447 TRANSFAC + 58392815 58392831 8.0E-06 AGTCAGGATTTATTGTT 17 V_SOX12_03_M02796 TRANSFAC + 58392824 58392837 3.0E-06 TTATTGTTCATACT 14 V_SRY_05_M02917 TRANSFAC - 58392821 58392837 1.0E-06 AGTATGAACAATAAATC 17 V_MAFK_04_M02880 TRANSFAC - 58392794 58392808 7.0E-06 CTAAAATTTGCAACT 15 V_GATA6_04_M02757 TRANSFAC - 58385648 58385664 5.0E-06 TCCAGAGATTAGAATTC 17 V_IRXB3_01_M01377 TRANSFAC - 58394714 58394730 3.0E-06 CTCATACATGTTGATTT 17 V_IRXB3_01_M01377 TRANSFAC + 58394715 58394731 4.0E-06 AATCAACATGTATGAGA 17 V_STAT1_Q6_M01823 TRANSFAC + 58393565 58393574 8.0E-06 TTCAGGGAAA 10 V_GLIS2_04_M02863 TRANSFAC - 58392927 58392940 1.0E-06 TGTATTACTAAACA 14 V_ARID5A_04_M02840 TRANSFAC + 58385634 58385650 3.0E-06 CTTCAAATACCATAGAA 17 V_DMRT5_01_M01150 TRANSFAC - 58389934 58389948 1.0E-05 ACTTGTTTCTATGTC 15 V_NANOG_02_M01247 TRANSFAC + 58389921 58389940 3.0E-06 AAAGCAAAACAATGACATAG 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.