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KLHDC9 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 126823 kelch domain containing 9 chr1 + 161063180 - 161068680 161068180 Transcription Factor Binding Sites   Download all TFBS in the KLHDC9 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR - 161067587 161067605 0.0E+00 TGGCCACTAGAGGGTAGCA 19 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX - 161068015 161068024 8.0E-06 TCAATAAAAA 10 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX - 161066638 161066649 3.0E-06 TCTTTTCCCTCA 12 ESRRG_nuclearreceptor_full_dimeric_17_1 SELEX + 161066660 161066676 1.0E-06 AATTTCAGCCAAGGACA 17 ESRRG_nuclearreceptor_full_dimeric_17_1 SELEX + 161066670 161066686 5.0E-06 AAGGACAGTAAAAGTTA 17 EWSR1-FLI1_MA0149.1 JASPAR - 161066109 161066126 8.0E-06 GGAAGAAAGCAAACCAGC 18 EWSR1-FLI1_MA0149.1 JASPAR - 161066113 161066130 7.0E-06 GAGAGGAAGAAAGCAAAC 18 SOX7_HMG_full_dimeric_17_2 SELEX + 161066656 161066672 8.0E-06 TTTAAATTTCAGCCAAG 17 STAT1_MA0137.2 JASPAR + 161070575 161070589 0.0E+00 CTTTTCCCGGAATTC 15 EBF1_MA0154.1 JASPAR - 161067834 161067843 5.0E-06 ACCCCAGGGA 10 RUNX3_RUNX_DBD_dimeric_16_1 SELEX + 161068287 161068302 9.0E-06 AAGCCGCAGACCCCAC 16 Sox1_HMG_DBD_dimeric_13_1 SELEX - 161067711 161067723 6.0E-06 TCAAAGGCATTGT 13 Pax4_MA0068.1 JASPAR - 161067255 161067284 7.0E-06 GAAATACAGACAGAATTTTCCTCCCAACAC 30 Pax4_MA0068.1 JASPAR - 161067393 161067422 8.0E-06 GAAAATGAGAAAAACAGACTCCTACCCTTC 30 Pax4_MA0068.1 JASPAR - 161067395 161067424 4.0E-06 GAGAAAATGAGAAAAACAGACTCCTACCCT 30 ZNF238_C2H2_full_monomeric_13_1 SELEX + 161066599 161066611 3.0E-06 AATCCAGCTGTTG 13 RFX2_RFX_DBD_dimeric_15_1 SELEX + 161068156 161068170 8.0E-06 GGTTGCTGGGCGACC 15 Sox17_HMG_DBD_dimeric_15_2 SELEX + 161067180 161067194 8.0E-06 ACAAGTAGCAGTCAT 15 Esrra_nuclearreceptor_DBD_dimeric_17_1 SELEX + 161066660 161066676 8.0E-06 AATTTCAGCCAAGGACA 17 Esrra_nuclearreceptor_DBD_dimeric_17_1 SELEX + 161066670 161066686 1.0E-06 AAGGACAGTAAAAGTTA 17 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 161068015 161068025 9.0E-06 GTCAATAAAAA 11 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX - 161068015 161068024 9.0E-06 TCAATAAAAA 10 NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX + 161066651 161066666 0.0E+00 TGACTTTTAAATTTCA 16 NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX - 161066651 161066666 0.0E+00 TGAAATTTAAAAGTCA 16 NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX + 161067907 161067922 8.0E-06 TGCACCTCAAATGTCA 16 SRY_MA0084.1 JASPAR + 161067997 161068005 7.0E-06 GTTAACAAT 9 RFX3_RFX_DBD_dimeric_15_1 SELEX + 161068156 161068170 8.0E-06 GGTTGCTGGGCGACC 15 ESRRG_nuclearreceptor_full_monomeric_10_1 SELEX + 161066039 161066048 5.0E-06 ACAAGGTCAT 10 ZSCAN4_C2H2_full_monomeric_15_1 SELEX - 161066018 161066032 2.0E-06 TACACAAACTGAAAG 15 RFX4_RFX_DBD_dimeric_15_1 SELEX + 161068156 161068170 2.0E-06 GGTTGCTGGGCGACC 15 RFX4_RFX_DBD_dimeric_15_1 SELEX - 161068156 161068170 5.0E-06 GGTCGCCCAGCAACC 15 Stat3_MA0144.1 JASPAR - 161070577 161070586 5.0E-06 TTCCGGGAAA 10 Esrra_nuclearreceptor_DBD_monomeric_11_1 SELEX + 161066038 161066048 5.0E-06 GACAAGGTCAT 11 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 161065995 161066009 4.0E-06 GATAAGTGAAAGGGG 15 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 161067785 161067799 1.0E-06 GGGAAGTGAAAGTGG 15 Tp53_p53l_DBD_dimeric_17_1 SELEX + 161066084 161066100 2.0E-06 GCATGTGTCATACAAGT 17 ESRRB_nuclearreceptor_DBD_monomeric_11_1 SELEX + 161066039 161066049 4.0E-06 ACAAGGTCATT 11 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX - 161068015 161068024 6.0E-06 TCAATAAAAA 10 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX + 161067794 161067804 8.0E-06 CTTCCCCACCC 11 CPEB1_RRM_full_monomeric_8_1 SELEX - 161068015 161068022 4.0E-06 AATAAAAA 8 THRB_nuclearreceptor_DBD_dimeric_19_1 SELEX + 161066030 161066048 6.0E-06 GTATCATTGACAAGGTCAT 19 THRB_nuclearreceptor_DBD_dimeric_19_1 SELEX - 161066030 161066048 6.0E-06 ATGACCTTGTCAATGATAC 19 Sox1_HMG_DBD_dimeric_15_1 SELEX - 161067710 161067724 8.0E-06 CTCAAAGGCATTGTT 15 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX - 161068015 161068025 6.0E-06 GTCAATAAAAA 11 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 161068015 161068027 5.0E-06 AGGTCAATAAAAA 13 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX - 161068015 161068025 9.0E-06 GTCAATAAAAA 11 ONECUT3_CUT_DBD_monomeric_14_1 SELEX - 161066683 161066696 4.0E-06 AAAAAATCACTAAC 14 IRF2_MA0051.1 JASPAR - 161067782 161067799 6.0E-06 GGGAAGTGAAAGTGGACT 18 V_NFAT_Q4_01_M00935 TRANSFAC + 161067262 161067271 3.0E-06 GAGGAAAATT 10 V_AP2ALPHA_Q6_M01857 TRANSFAC - 161068352 161068362 9.0E-06 AGCCTGCGGCC 11 V_SPI1_01_M01203 TRANSFAC - 161065986 161066002 5.0E-06 GAAAGGGGGAACTGAGA 17 V_STAT3_01_M00225 TRANSFAC + 161070572 161070592 2.0E-06 GTGCTTTTCCCGGAATTCATT 21 V_STAT3_01_M00225 TRANSFAC - 161070572 161070592 1.0E-06 AATGAATTCCGGGAAAAGCAC 21 V_NFKB_Q6_01_M00774 TRANSFAC - 161066429 161066444 6.0E-06 GAAATGGGAACTCCCC 16 V_CDX2_Q5_01_M01659 TRANSFAC - 161068014 161068024 1.0E-05 TCAATAAAAAT 11 V_DUXL_01_M01390 TRANSFAC + 161067623 161067639 2.0E-06 CCACCCAATCAATCGGG 17 V_ALX4_01_M00619 TRANSFAC - 161067958 161067970 4.0E-06 CCTTAGAATAAAC 13 V_SMAD3_Q6_01_M01888 TRANSFAC - 161067269 161067281 0.0E+00 ATACAGACAGAAT 13 V_RORA1_01_M00156 TRANSFAC + 161066036 161066048 8.0E-06 TTGACAAGGTCAT 13 V_HOXA13_02_M01297 TRANSFAC + 161067376 161067384 9.0E-06 AAATAAAAG 9 V_IK_Q5_M01169 TRANSFAC + 161066608 161066617 8.0E-06 GTTGGGAGGT 10 V_AR_Q6_01_M01996 TRANSFAC + 161070586 161070600 4.0E-06 ATTCATTTAGTTCTT 15 V_IRF_Q6_01_M00972 TRANSFAC - 161065998 161066008 5.0E-06 ATAAGTGAAAG 11 V_IRF_Q6_01_M00972 TRANSFAC - 161067788 161067798 4.0E-06 GGAAGTGAAAG 11 V_IRF2_Q6_M01882 TRANSFAC - 161067785 161067800 1.0E-06 GGGGAAGTGAAAGTGG 16 V_GCNF_Q3_M02009 TRANSFAC + 161066040 161066049 9.0E-06 CAAGGTCATT 10 V_AP4_Q6_M00176 TRANSFAC - 161067248 161067257 2.0E-06 CACAGCTGGT 10 V_POU3F2_02_M00464 TRANSFAC + 161066005 161066014 2.0E-06 TTATCTTAAT 10 V_SOX11_04_M02899 TRANSFAC - 161065971 161065984 7.0E-06 AAAATTGTGAGAGA 14 V_GLI1_01_M01702 TRANSFAC - 161068451 161068461 7.0E-06 GACCACCTACG 11 V_AP2_Q6_01_M00915 TRANSFAC + 161068350 161068362 9.0E-06 CGGGCCGCAGGCT 13 V_STAT5B_01_M00459 TRANSFAC + 161070575 161070589 1.0E-06 CTTTTCCCGGAATTC 15 V_STAT5B_01_M00459 TRANSFAC - 161070575 161070589 2.0E-06 GAATTCCGGGAAAAG 15 V_P50RELAP65_Q5_01_M01224 TRANSFAC + 161066430 161066441 9.0E-06 GGGAGTTCCCAT 12 V_SP1_02_M01303 TRANSFAC + 161066424 161066434 5.0E-06 GGGGTGGGGAG 11 V_AP4_Q6_02_M01860 TRANSFAC - 161067600 161067612 8.0E-06 TCAGCTCTGGCCA 13 V_PU1_Q4_M01172 TRANSFAC + 161065983 161066001 1.0E-06 TTCTCTCAGTTCCCCCTTT 19 V_PU1_Q4_M01172 TRANSFAC + 161066114 161066132 5.0E-06 TTTGCTTTCTTCCTCTCTC 19 V_PU1_Q4_M01172 TRANSFAC + 161067273 161067291 3.0E-06 TGTCTGTATTTCCTCCTTC 19 V_PU1_Q4_M01172 TRANSFAC + 161067786 161067804 4.0E-06 CACTTTCACTTCCCCACCC 19 V_PU1_Q4_M01172 TRANSFAC + 161067808 161067826 7.0E-06 GACTTTTGCTTCTCCTTCC 19 V_HOXD13_01_M01404 TRANSFAC - 161068012 161068027 1.0E-06 AGGTCAATAAAAATCC 16 V_STAT4_Q4_M01666 TRANSFAC - 161066000 161066013 7.0E-06 TTAAGATAAGTGAA 14 V_STAT4_Q4_M01666 TRANSFAC - 161070573 161070586 9.0E-06 TTCCGGGAAAAGCA 14 V_PPARGRXRA_01_M02262 TRANSFAC - 161065957 161065971 9.0E-06 ACAGGGAAAAGGGCA 15 V_SRF_C_M00215 TRANSFAC + 161066505 161066519 3.0E-06 GCCTAAAATGGACAT 15 V_ELF4_04_M02850 TRANSFAC - 161066685 161066701 7.0E-06 TCTCTAAAAAATCACTA 17 V_ELF4_04_M02850 TRANSFAC + 161067372 161067388 1.0E-06 GCTTAAATAAAAGATAT 17 V_TAL1_Q6_M00993 TRANSFAC + 161066601 161066610 7.0E-06 TCCAGCTGTT 10 V_GLI3_02_M01704 TRANSFAC - 161068451 161068461 5.0E-06 GACCACCTACG 11 V_TGIF_02_M01346 TRANSFAC + 161066583 161066599 7.0E-06 GAGTATGACAGATCTGA 17 V_HOXB13_01_M01467 TRANSFAC - 161068012 161068027 1.0E-06 AGGTCAATAAAAATCC 16 V_STAF_01_M00262 TRANSFAC + 161070576 161070597 1.0E-06 TTTTCCCGGAATTCATTTAGTT 22 V_SOX8_04_M02912 TRANSFAC - 161067672 161067685 6.0E-06 TCATTCATCAAATA 14 V_RFX1_01_M00280 TRANSFAC - 161068155 161068171 1.0E-06 TGGTCGCCCAGCAACCA 17 V_IRF2_01_M00063 TRANSFAC - 161065997 161066009 0.0E+00 GATAAGTGAAAGG 13 V_STAT1_01_M00224 TRANSFAC + 161070572 161070592 5.0E-06 GTGCTTTTCCCGGAATTCATT 21 V_STAT1_01_M00224 TRANSFAC - 161070572 161070592 1.0E-06 AATGAATTCCGGGAAAAGCAC 21 V_HOXB9_01_M01426 TRANSFAC - 161068012 161068027 1.0E-06 AGGTCAATAAAAATCC 16 V_IRF3_Q3_M01279 TRANSFAC + 161067807 161067819 9.0E-06 TGACTTTTGCTTC 13 V_IRF_Q6_M00772 TRANSFAC + 161067784 161067798 0.0E+00 TCCACTTTCACTTCC 15 V_HNF1_Q6_01_M01011 TRANSFAC - 161066679 161066699 1.0E-05 TCTAAAAAATCACTAACTTTT 21 V_SZF11_01_M01109 TRANSFAC + 161068095 161068109 3.0E-06 CCACGGTAACTGCTG 15 V_ISRE_01_M00258 TRANSFAC + 161067786 161067800 6.0E-06 CACTTTCACTTCCCC 15 V_DUXBL_01_M02968 TRANSFAC + 161067623 161067639 2.0E-06 CCACCCAATCAATCGGG 17 V_IK2_01_M00087 TRANSFAC + 161067650 161067661 1.0E-06 CTTTGGGAATAA 12 V_AP4_Q5_M00175 TRANSFAC - 161067248 161067257 6.0E-06 CACAGCTGGT 10 V_PNR_01_M01650 TRANSFAC - 161066651 161066664 3.0E-06 AAATTTAAAAGTCA 14 V_EBF1_01_M02267 TRANSFAC - 161067834 161067843 5.0E-06 ACCCCAGGGA 10 V_SRF_Q5_02_M01007 TRANSFAC - 161066502 161066520 7.0E-06 TATGTCCATTTTAGGCTCT 19 V_GATA5_04_M02860 TRANSFAC + 161067378 161067394 3.0E-06 ATAAAAGATATCAGGGA 17 V_ARID3A_04_M02735 TRANSFAC + 161067370 161067386 4.0E-06 TGGCTTAAATAAAAGAT 17 V_TGIF1_01_M03111 TRANSFAC + 161066583 161066599 7.0E-06 GAGTATGACAGATCTGA 17 V_CTCF_02_M01259 TRANSFAC - 161067589 161067608 1.0E-06 CTCTGGCCACTAGAGGGTAG 20 V_STAT3_03_M01595 TRANSFAC - 161070573 161070588 2.0E-06 AATTCCGGGAAAAGCA 16 V_CTCF_01_M01200 TRANSFAC - 161067587 161067606 0.0E+00 CTGGCCACTAGAGGGTAGCA 20 V_BLIMP1_Q6_M01066 TRANSFAC - 161067785 161067800 0.0E+00 GGGGAAGTGAAAGTGG 16 V_ICSBP_Q6_M00699 TRANSFAC - 161067786 161067797 1.0E-06 GAAGTGAAAGTG 12 V_FOXO1_Q5_M01216 TRANSFAC - 161067405 161067413 1.0E-05 AAAAACAGA 9 V_SOX17_04_M02904 TRANSFAC - 161067673 161067689 6.0E-06 TTTGTCATTCATCAAAT 17 V_IRF7_01_M00453 TRANSFAC - 161067784 161067801 4.0E-06 TGGGGAAGTGAAAGTGGA 18 V_GATA4_Q3_M00632 TRANSFAC + 161067383 161067394 0.0E+00 AGATATCAGGGA 12 V_PTF1BETA_Q6_M00657 TRANSFAC - 161070569 161070582 1.0E-06 GGGAAAAGCACAAC 14 V_ELF1_Q6_M00746 TRANSFAC - 161067280 161067291 5.0E-06 GAAGGAGGAAAT 12 V_MTF1_06_M02882 TRANSFAC - 161067407 161067420 6.0E-06 AAATGAGAAAAACA 14 V_GLI2_01_M01703 TRANSFAC - 161068451 161068461 4.0E-06 GACCACCTACG 11 V_MAZR_01_M00491 TRANSFAC - 161066545 161066557 1.0E-05 AGGGGTGGGGCAA 13 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC - 161067798 161067806 8.0E-06 GAGGGTGGG 9 V_T3R_Q6_M00963 TRANSFAC - 161066670 161066678 3.0E-06 ACTGTCCTT 9 V_GFI1B_01_M01058 TRANSFAC + 161067929 161067940 3.0E-06 CAAATCAGTTCA 12 V_ERR1_Q2_M00511 TRANSFAC + 161066036 161066049 3.0E-06 TTGACAAGGTCATT 14 V_STAT_01_M00223 TRANSFAC + 161070578 161070586 7.0E-06 TTCCCGGAA 9 V_ESRRA_03_M02748 TRANSFAC + 161066036 161066052 2.0E-06 TTGACAAGGTCATTATA 17 V_SRF_Q5_01_M00922 TRANSFAC + 161066506 161066520 6.0E-06 CCTAAAATGGACATA 15 V_SRF_Q4_M00810 TRANSFAC + 161066505 161066522 5.0E-06 GCCTAAAATGGACATATA 18 V_IRF1_Q6_01_M01881 TRANSFAC + 161065996 161066009 8.0E-06 CCCTTTCACTTATC 14 V_IRF1_Q6_01_M01881 TRANSFAC + 161066016 161066029 7.0E-06 CCCTTTCAGTTTGT 14 V_IRF1_Q6_01_M01881 TRANSFAC + 161067786 161067799 1.0E-06 CACTTTCACTTCCC 14 V_SRF_02_M01257 TRANSFAC + 161066504 161066521 5.0E-06 AGCCTAAAATGGACATAT 18 V_TBX22_01_M01195 TRANSFAC - 161067915 161067933 8.0E-06 ATTTGCGATTTTGACATTT 19 V_TCFAP2A_03_M02819 TRANSFAC + 161066632 161066646 9.0E-06 GAAGCCTGAGGGAAA 15 V_STAT5A_01_M00457 TRANSFAC + 161070575 161070589 8.0E-06 CTTTTCCCGGAATTC 15 V_STAT5A_01_M00457 TRANSFAC - 161070575 161070589 6.0E-06 GAATTCCGGGAAAAG 15 V_SOX14_04_M02901 TRANSFAC + 161067255 161067271 1.0E-06 GTGTTGGGAGGAAAATT 17 V_EWSR1FLI1_01_M02252 TRANSFAC - 161066109 161066126 8.0E-06 GGAAGAAAGCAAACCAGC 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 161066113 161066130 7.0E-06 GAGAGGAAGAAAGCAAAC 18 V_SOX15_04_M02903 TRANSFAC - 161066657 161066671 3.0E-06 TTGGCTGAAATTTAA 15 V_SOX5_07_M02909 TRANSFAC - 161065971 161065987 6.0E-06 GAGAAAATTGTGAGAGA 17 V_TCFAP2E_03_M02822 TRANSFAC + 161066632 161066646 4.0E-06 GAAGCCTGAGGGAAA 15 V_HOXD10_01_M01375 TRANSFAC - 161068011 161068027 3.0E-06 AGGTCAATAAAAATCCT 17 V_PBX1_04_M01357 TRANSFAC - 161067669 161067685 3.0E-06 TCATTCATCAAATAGGC 17 V_BRF1_01_M01747 TRANSFAC - 161067741 161067753 5.0E-06 GGGTTCTAGTCCC 13 V_STAT1_Q6_M01823 TRANSFAC - 161070577 161070586 1.0E-06 TTCCGGGAAA 10 V_ATATA_B_M00311 TRANSFAC - 161067372 161067381 3.0E-06 TTATTTAAGC 10 V_STAT1_05_M01260 TRANSFAC - 161070568 161070589 3.0E-06 GAATTCCGGGAAAAGCACAACA 22 V_PAX2_02_M00486 TRANSFAC - 161067956 161067964 8.0E-06 AATAAACCC 9 PPARG_RXRA_MA0065.2 JASPAR - 161065957 161065971 9.0E-06 ACAGGGAAAAGGGCA 15 V_PPARA_01_M00242 TRANSFAC - 161065957 161065976 2.0E-06 GAGAGACAGGGAAAAGGGCA 20 V_NF1_Q6_M00193 TRANSFAC - 161066656 161066673 8.0E-06 CCTTGGCTGAAATTTAAA 18

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.