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NTN5


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
126147 netrin 5 chr19 -49175764 - 49181264 49176264

Transcription Factor Binding Sites

 
Download all TFBS in the NTN5 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
CTCF_MA0139.1 JASPAR + 49178813 49178831 5.0E-06 CAGCCACAAGAGGGAGCAC 19
Tp53_p53l_DBD_dimeric_18_1 SELEX - 49180270 49180287 7.0E-06 ACAGGTAGGACTACAGGT 18
TBX1_TBX_DBD_dimeric_23_1 SELEX + 49180223 49180245 2.0E-06 TTTCAGTCTTGAAAGGAGTGAGG 23
GATA5_GATA_DBD_monomeric_8_1 SELEX - 49178419 49178426 7.0E-06 AGATAAGA 8
GATA4_GATA_DBD_monomeric_8_1 SELEX - 49178419 49178426 7.0E-06 AGATAAGA 8
SREBF2_bHLH_DBD_dimeric_10_1 SELEX + 49180177 49180186 5.0E-06 ATCACCTGAT 10
Srebf1_bHLH_DBD_dimeric_10_1 SELEX + 49180177 49180186 4.0E-06 ATCACCTGAT 10
NFATC1_NFAT_full_dimeric_20_1 SELEX - 49177827 49177846 5.0E-06 CAAGGAACAAAAGCTTCCCT 20
CTCF_C2H2_full_monomeric_17_1 SELEX - 49178814 49178830 1.0E-05 TGCTCCCTCTTGTGGCT 17
Gata1_MA0035.2 JASPAR - 49178418 49178428 1.0E-06 TCAGATAAGAA 11
GATA3_GATA_full_monomeric_8_1 SELEX - 49178419 49178426 7.0E-06 AGATAAGA 8
Sox11_HMG_DBD_dimeric_15_1 SELEX + 49180161 49180175 7.0E-06 AACAACTCCAGTGCC 15
IRF3_IRF_full_trimeric_21_1 SELEX + 49180408 49180428 9.0E-06 CAAAAAAAGAAAAAGAAAAGA 21
SOX9_HMG_full_dimeric_17_1 SELEX + 49180160 49180176 7.0E-06 AAACAACTCCAGTGCCT 17
V_FOXP1_01_M00987 TRANSFAC - 49180410 49180429 2.0E-06 TTCTTTTCTTTTTCTTTTTT 20
V_TCF3_01_M01594 TRANSFAC - 49180409 49180421 3.0E-06 TTTTTCTTTTTTT 13
V_TCF3_01_M01594 TRANSFAC - 49180415 49180427 4.0E-06 CTTTTCTTTTTCT 13
V_CDX2_Q5_01_M01659 TRANSFAC - 49178924 49178934 8.0E-06 TTCATAAATTC 11
V_GATA1_Q6_M02004 TRANSFAC - 49178417 49178431 2.0E-06 AGCTCAGATAAGAAC 15
V_EVI1_04_M00081 TRANSFAC + 49180411 49180425 6.0E-06 AAAAAGAAAAAGAAA 15
V_EVI1_04_M00081 TRANSFAC + 49180416 49180430 2.0E-06 GAAAAAGAAAAGAAA 15
V_IRF_Q6_01_M00972 TRANSFAC + 49180410 49180420 6.0E-06 AAAAAAGAAAA 11
V_IRF_Q6_01_M00972 TRANSFAC + 49180416 49180426 7.0E-06 GAAAAAGAAAA 11
V_IRF2_Q6_M01882 TRANSFAC + 49180414 49180429 3.0E-06 AAGAAAAAGAAAAGAA 16
V_GATA_C_M00203 TRANSFAC - 49178416 49178426 7.0E-06 AGATAAGAACC 11
V_DLX2_01_M01468 TRANSFAC - 49180240 49180255 3.0E-06 CAGATAATTGCCTCAC 16
V_PU1_Q4_M01172 TRANSFAC - 49180409 49180427 5.0E-06 CTTTTCTTTTTCTTTTTTT 19
V_CDX_Q5_M00991 TRANSFAC + 49178580 49178597 1.0E-06 CACAGTAAGAGAAGTAAA 18
V_REX1_01_M01695 TRANSFAC - 49178688 49178697 7.0E-06 TCAGCCATTT 10
V_ELF4_04_M02850 TRANSFAC + 49180405 49180421 7.0E-06 TCTCAAAAAAAGAAAAA 17
V_HOXA6_01_M01392 TRANSFAC - 49180240 49180255 7.0E-06 CAGATAATTGCCTCAC 16
V_ZFP105_03_M02827 TRANSFAC + 49180410 49180424 7.0E-06 AAAAAAGAAAAAGAA 15
V_SREBP1_01_M00220 TRANSFAC + 49180176 49180186 4.0E-06 TATCACCTGAT 11
V_CEBPD_Q6_M00621 TRANSFAC - 49180239 49180250 3.0E-06 AATTGCCTCACT 12
V_CEBPB_02_M00117 TRANSFAC + 49180359 49180372 6.0E-06 AGATTGCGCCATTG 14
V_IRF_Q6_M00772 TRANSFAC - 49180410 49180424 1.0E-06 TTCTTTTTCTTTTTT 15
V_IRF_Q6_M00772 TRANSFAC - 49180416 49180430 4.0E-06 TTTCTTTTCTTTTTC 15
V_YY1_Q6_02_M01035 TRANSFAC - 49178687 49178697 5.0E-06 TCAGCCATTTT 11
V_REX1_03_M01744 TRANSFAC + 49178687 49178698 1.0E-06 AAAATGGCTGAC 12
V_SOX12_04_M02900 TRANSFAC + 49180411 49180426 4.0E-06 AAAAAGAAAAAGAAAA 16
V_GATA1_09_M02254 TRANSFAC - 49178418 49178428 1.0E-06 TCAGATAAGAA 11
V_CTCF_02_M01259 TRANSFAC + 49178810 49178829 0.0E+00 GAACAGCCACAAGAGGGAGC 20
V_CTCF_01_M01200 TRANSFAC + 49178812 49178831 1.0E-06 ACAGCCACAAGAGGGAGCAC 20
V_HBP1_04_M02866 TRANSFAC - 49180208 49180224 0.0E+00 AAGTCCCATTGTCCAGG 17
V_MTF1_06_M02882 TRANSFAC + 49180410 49180423 1.0E-06 AAAAAAGAAAAAGA 14
V_SIRT6_01_M01797 TRANSFAC - 49178419 49178426 7.0E-06 AGATAAGA 8
V_FOXO3_01_M00477 TRANSFAC + 49178914 49178927 9.0E-06 CCCTTGTTTAGAAT 14
V_IRF1_Q6_01_M01881 TRANSFAC - 49180409 49180422 7.0E-06 CTTTTTCTTTTTTT 14
V_GATA2_03_M00349 TRANSFAC - 49178419 49178428 7.0E-06 TCAGATAAGA 10
V_SRF_06_M02916 TRANSFAC + 49180408 49180424 6.0E-06 CAAAAAAAGAAAAAGAA 17
V_SRF_06_M02916 TRANSFAC + 49180409 49180425 1.0E-05 AAAAAAAGAAAAAGAAA 17
V_VMAF_01_M00035 TRANSFAC + 49178897 49178915 4.0E-06 AAATGCAGACACAGGACCC 19
V_BSX_01_M01442 TRANSFAC - 49180240 49180255 1.0E-06 CAGATAATTGCCTCAC 16
V_BSX_01_M01442 TRANSFAC + 49180242 49180257 1.0E-05 GAGGCAATTATCTGGG 16
V_CMAF_01_M01070 TRANSFAC - 49178591 49178609 6.0E-06 CTATTTGCAGACTTTACTT 19
V_SMAD1_01_M01590 TRANSFAC + 49180417 49180428 1.0E-06 AAAAAGAAAAGA 12
V_NANOG_02_M01247 TRANSFAC + 49180407 49180426 0.0E+00 TCAAAAAAAGAAAAAGAAAA 20
V_NANOG_02_M01247 TRANSFAC + 49180413 49180432 0.0E+00 AAAGAAAAAGAAAAGAAAGG 20
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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