Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

COX6B2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 125965 cytochrome c oxidase subunit VIb polypeptide 2 (testis) chr19 - 55865682 - 55871182 55866182 Transcription Factor Binding Sites   Download all TFBS in the COX6B2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SP8_C2H2_DBD_monomeric_12_1 SELEX + 55865362 55865373 2.0E-06 GCCACGCCCATT 12 Foxa2_MA0047.2 JASPAR + 55867033 55867044 2.0E-06 TGTTTACACTGA 12 SP3_C2H2_DBD_monomeric_11_1 SELEX + 55865362 55865372 6.0E-06 GCCACGCCCAT 11 SOX10_HMG_full_dimeric_15_3 SELEX - 55867312 55867326 6.0E-06 CTGAAGTGCAGTGAT 15 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 55865643 55865653 1.0E-05 GCCCCGCCCCC 11 FOXA1_MA0148.1 JASPAR + 55867033 55867043 1.0E-06 TGTTTACACTG 11 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 55867031 55867042 2.0E-06 AGTGTAAACAAT 12 KLF14_C2H2_DBD_monomeric_14_1 SELEX + 55865361 55865374 2.0E-06 AGCCACGCCCATTC 14 FOXO3_MA0157.1 JASPAR - 55867033 55867040 7.0E-06 TGTAAACA 8 FOXC1_forkhead_DBD_monomeric_11_1 SELEX - 55867032 55867042 9.0E-06 AGTGTAAACAA 11 SOX8_HMG_full_dimeric_17_1 SELEX - 55867311 55867327 4.0E-06 ACTGAAGTGCAGTGATG 17 STAT1_MA0137.2 JASPAR + 55870513 55870527 2.0E-06 CTCTTCCAGGAATTC 15 FOXO1_forkhead_DBD_monomeric_8_1 SELEX - 55867032 55867039 7.0E-06 GTAAACAA 8 KLF13_C2H2_full_monomeric_18_1 SELEX + 55865360 55865377 1.0E-06 AAGCCACGCCCATTCCAG 18 Klf4_MA0039.2 JASPAR - 55865362 55865371 1.0E-05 TGGGCGTGGC 10 SP1_MA0079.2 JASPAR + 55865644 55865653 7.0E-06 CCCCGCCCCC 10 SRY_MA0084.1 JASPAR - 55867031 55867039 3.0E-06 GTAAACAAT 9 SP4_C2H2_full_monomeric_17_1 SELEX + 55865359 55865375 0.0E+00 CAAGCCACGCCCATTCC 17 SP4_C2H2_full_monomeric_17_1 SELEX + 55865640 55865656 1.0E-06 CAGGCCCCGCCCCCACC 17 Klf12_C2H2_DBD_monomeric_15_1 SELEX + 55865361 55865375 4.0E-06 AGCCACGCCCATTCC 15 Stat3_MA0144.1 JASPAR - 55870515 55870524 2.0E-06 TTCCTGGAAG 10 SPDEF_ETS_full_putative-multimer_16_1 SELEX + 55864944 55864959 8.0E-06 GCATTAAGAAGAAACA 16 FOXB1_forkhead_full_monomeric_9_1 SELEX - 55867032 55867040 2.0E-06 TGTAAACAA 9 FOXO3_forkhead_full_monomeric_8_1 SELEX - 55867032 55867039 7.0E-06 GTAAACAA 8 FOXB1_forkhead_DBD_monomeric_11_1 SELEX - 55867032 55867042 1.0E-05 AGTGTAAACAA 11 ZNF784_C2H2_full_monomeric_10_1 SELEX + 55865529 55865538 4.0E-06 CTACCTACCT 10 Zfx_MA0146.1 JASPAR - 55865640 55865653 8.0E-06 GGGGGCGGGGCCTG 14 V_ZFP187_03_M02830 TRANSFAC + 55867050 55867063 1.0E-06 AAATGTACGAATTA 14 V_FOXO3_02_M02270 TRANSFAC - 55867033 55867040 7.0E-06 TGTAAACA 8 V_FOXA2_04_M02749 TRANSFAC - 55867028 55867044 2.0E-06 TCAGTGTAAACAATCCT 17 V_NF1_Q6_01_M00806 TRANSFAC - 55870529 55870545 5.0E-06 TTGACGTGTTGCCAACA 17 V_ZFX_01_M01593 TRANSFAC + 55865637 55865652 3.0E-06 GACCAGGCCCCGCCCC 16 V_HMGIY_Q3_M01010 TRANSFAC - 55867189 55867203 3.0E-06 TTTGGTATTTTTTGT 15 V_BCL6_01_M01183 TRANSFAC - 55867191 55867206 3.0E-06 AATTTTGGTATTTTTT 16 V_SP1_Q6_01_M00931 TRANSFAC - 55865602 55865611 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC - 55865643 55865652 4.0E-06 GGGGCGGGGC 10 V_EGR_Q6_M00807 TRANSFAC - 55865645 55865655 6.0E-06 GTGGGGGCGGG 11 V_STAT5B_01_M00459 TRANSFAC - 55870513 55870527 3.0E-06 GAATTCCTGGAAGAG 15 V_FOXJ1_03_M02750 TRANSFAC - 55867027 55867042 3.0E-06 AGTGTAAACAATCCTG 16 V_SP1_03_M02281 TRANSFAC + 55865644 55865653 7.0E-06 CCCCGCCCCC 10 V_GKLF_02_M01588 TRANSFAC + 55865362 55865373 8.0E-06 GCCACGCCCATT 12 V_ELF4_04_M02850 TRANSFAC + 55867186 55867202 5.0E-06 TCTACAAAAAATACCAA 17 V_GC_01_M00255 TRANSFAC - 55865360 55865373 3.0E-06 AATGGGCGTGGCTT 14 V_GC_01_M00255 TRANSFAC - 55865620 55865633 3.0E-06 AAAAGGCGGGGCTG 14 V_GC_01_M00255 TRANSFAC - 55865641 55865654 0.0E+00 TGGGGGCGGGGCCT 14 V_MTERF_01_M01245 TRANSFAC - 55867198 55867211 5.0E-06 TGGCTAATTTTGGT 14 V_FREAC3_01_M00291 TRANSFAC - 55867029 55867044 4.0E-06 TCAGTGTAAACAATCC 16 V_FOXO1_02_M00474 TRANSFAC + 55867029 55867042 1.0E-06 GGATTGTTTACACT 14 V_XFD3_01_M00269 TRANSFAC - 55867029 55867042 9.0E-06 AGTGTAAACAATCC 14 V_KROX_Q6_M00982 TRANSFAC + 55865645 55865658 7.0E-06 CCCGCCCCCACCAA 14 V_SP1_Q6_M00196 TRANSFAC - 55865601 55865613 2.0E-06 GAGGGGCGGGGCG 13 V_SP1_Q6_M00196 TRANSFAC - 55865642 55865654 1.0E-06 TGGGGGCGGGGCC 13 V_HNF3A_01_M01261 TRANSFAC - 55867032 55867041 5.0E-06 GTGTAAACAA 10 V_SP1_01_M00008 TRANSFAC - 55865520 55865529 7.0E-06 GGGGCAGGGT 10 V_MAF_Q6_01_M00983 TRANSFAC - 55867021 55867031 4.0E-06 TCCTGAGTCAG 11 V_TFIII_Q6_M00706 TRANSFAC - 55865435 55865443 6.0E-06 AGAGGGAGG 9 V_SP4_Q5_M01273 TRANSFAC + 55865602 55865612 8.0E-06 GCCCCGCCCCT 11 V_SP4_Q5_M01273 TRANSFAC + 55865643 55865653 1.0E-06 GCCCCGCCCCC 11 V_FREAC2_01_M00290 TRANSFAC - 55867029 55867044 0.0E+00 TCAGTGTAAACAATCC 16 V_CIZ_01_M00734 TRANSFAC + 55867190 55867198 6.0E-06 CAAAAAATA 9 V_SP4_04_M02914 TRANSFAC - 55865359 55865373 5.0E-06 AATGGGCGTGGCTTG 15 V_FOXL1_04_M02753 TRANSFAC - 55867028 55867044 3.0E-06 TCAGTGTAAACAATCCT 17 V_CPHX_01_M01478 TRANSFAC - 55867303 55867316 2.0E-06 GTGATGCCATCACA 14 V_CPHX_01_M01478 TRANSFAC + 55867304 55867317 2.0E-06 GTGATGGCATCACT 14 V_NRF2_Q4_M00821 TRANSFAC - 55867020 55867032 2.0E-06 ATCCTGAGTCAGG 13 V_FOXA2_03_M02260 TRANSFAC + 55867033 55867044 2.0E-06 TGTTTACACTGA 12 V_ZFP281_01_M01597 TRANSFAC - 55865644 55865654 6.0E-06 TGGGGGCGGGG 11 V_SP1_Q2_01_M00933 TRANSFAC + 55865603 55865612 7.0E-06 CCCCGCCCCT 10 V_SP1_Q2_01_M00933 TRANSFAC + 55865644 55865653 4.0E-06 CCCCGCCCCC 10 V_FOXO4_01_M00472 TRANSFAC - 55867029 55867039 4.0E-06 GTAAACAATCC 11 V_UF1H3BETA_Q6_M01068 TRANSFAC - 55865643 55865656 1.0E-06 GGTGGGGGCGGGGC 14 V_SP1_Q4_01_M00932 TRANSFAC - 55865642 55865654 1.0E-06 TGGGGGCGGGGCC 13 V_STAT1_05_M01260 TRANSFAC - 55870506 55870527 3.0E-06 GAATTCCTGGAAGAGCCGTGCT 22 V_FOXK1_03_M02752 TRANSFAC - 55867028 55867044 3.0E-06 TCAGTGTAAACAATCCT 17 V_RFX1_02_M00281 TRANSFAC - 55863442 55863459 1.0E-06 AGGTCACCCAGGTAACAT 18

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.