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CNGB1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 1258 chr16 + 58000020 - 58010020 0 Transcription Factor Binding Sites   Download all TFBS in the CNGB1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXF2_MA0030.1 JASPAR - 58000443 58000456 9.0E-06 CATTGATAAACATT 14 LHX2_homeodomain_DBD_dimeric_15_1 SELEX + 58000500 58000514 9.0E-06 CAACTAAACTAATCA 15 LHX2_homeodomain_DBD_dimeric_15_1 SELEX - 58000509 58000523 5.0E-06 TAAGTACACTGATTA 15 NFIX_NFI_full_dimeric_15_2 SELEX - 58000382 58000396 9.0E-06 CTGGCACAGATCCAT 15 MAFF_bZIP_DBD_dimeric_15_1 SELEX - 58000418 58000432 5.0E-06 CTGCTTAATCATCAT 15 Pax4_MA0068.1 JASPAR + 58000491 58000520 5.0E-06 AATAAATAGCAACTAAACTAATCAGTGTAC 30 POU6F2_POU_DBD_dimeric_16_1 SELEX - 58000492 58000507 8.0E-06 TTTAGTTGCTATTTAT 16 POU2F3_POU_DBD_dimeric_12_1 SELEX - 58000218 58000229 7.0E-06 ATGAATAGGCAT 12 Mafb_bZIP_DBD_dimeric_17_1 SELEX + 58000417 58000433 3.0E-06 CATGATGATTAAGCAGT 17 Mafb_bZIP_DBD_dimeric_17_1 SELEX - 58000417 58000433 7.0E-06 ACTGCTTAATCATCATG 17 MAFK_bZIP_full_dimeric_15_1 SELEX + 58000418 58000432 2.0E-06 ATGATGATTAAGCAG 15 MAFK_bZIP_full_dimeric_15_1 SELEX - 58000418 58000432 6.0E-06 CTGCTTAATCATCAT 15 MAFK_bZIP_DBD_dimeric_21_1 SELEX + 58000415 58000435 1.0E-06 TCCATGATGATTAAGCAGTTT 21 MAFK_bZIP_DBD_dimeric_21_1 SELEX - 58000415 58000435 3.0E-06 AAACTGCTTAATCATCATGGA 21 MEOX2_homeodomain_DBD_dimeric_17_1 SELEX - 58000508 58000524 6.0E-06 CTAAGTACACTGATTAG 17 MAFG_bZIP_full_dimeric_21_1 SELEX + 58000415 58000435 5.0E-06 TCCATGATGATTAAGCAGTTT 21 MAFG_bZIP_full_dimeric_21_1 SELEX - 58000415 58000435 2.0E-06 AAACTGCTTAATCATCATGGA 21 DUXA_homeodomain_DBD_dimeric_13_1 SELEX + 58000503 58000515 1.0E-06 CTAAACTAATCAG 13 POU5F1P1_POU_DBD_monomeric_12_1 SELEX - 58000218 58000229 1.0E-05 ATGAATAGGCAT 12 NFE2L2_MA0150.1 JASPAR + 58000421 58000431 3.0E-06 ATGATTAAGCA 11 V_DMRT4_01_M01149 TRANSFAC + 58000284 58000296 7.0E-06 AATGTGTCGAATT 13 V_FOXP1_01_M00987 TRANSFAC - 58000492 58000511 3.0E-06 TTAGTTTAGTTGCTATTTAT 20 V_CDP_03_M01342 TRANSFAC - 58000417 58000433 1.0E-06 ACTGCTTAATCATCATG 17 V_IPF1_02_M01234 TRANSFAC + 58000506 58000515 6.0E-06 AACTAATCAG 10 V_MEIS1AHOXA9_01_M00420 TRANSFAC - 58000397 58000410 9.0E-06 TAACAGTTTGCAGA 14 V_HNF4ALPHA_Q6_M00638 TRANSFAC - 58000345 58000357 8.0E-06 CAGAACTTTTCCT 13 V_CUX1_03_M02958 TRANSFAC - 58000417 58000433 1.0E-06 ACTGCTTAATCATCATG 17 V_LHX61_01_M01314 TRANSFAC + 58000503 58000519 1.0E-06 CTAAACTAATCAGTGTA 17 V_LHX61_01_M01314 TRANSFAC - 58000504 58000520 0.0E+00 GTACACTGATTAGTTTA 17 V_TCFAP2C_03_M02821 TRANSFAC + 58000205 58000219 8.0E-06 AGTCCCCGGGGCAAT 15 V_GFI1_01_M00250 TRANSFAC + 58000502 58000525 9.0E-06 ACTAAACTAATCAGTGTACTTAGC 24 V_RXRA_04_M02895 TRANSFAC + 58000069 58000084 5.0E-06 TCCCATAGTTTGGTCT 16 V_HNF1_Q6_01_M01011 TRANSFAC + 58000487 58000507 7.0E-06 ACAAAATAAATAGCAACTAAA 21 V_NKX3A_01_M00451 TRANSFAC - 58000086 58000097 9.0E-06 AAATAAGTGTGT 12 V_FOX_Q2_M00809 TRANSFAC + 58000442 58000454 8.0E-06 GAATGTTTATCAA 13 V_LHX61_02_M01422 TRANSFAC - 58000503 58000519 4.0E-06 TACACTGATTAGTTTAG 17 V_LHX61_02_M01422 TRANSFAC + 58000504 58000520 3.0E-06 TAAACTAATCAGTGTAC 17 V_TCFAP2A_03_M02819 TRANSFAC + 58000205 58000219 9.0E-06 AGTCCCCGGGGCAAT 15 V_NFE2_01_M00037 TRANSFAC + 58000200 58000210 8.0E-06 TGCTGAGTCCC 11 V_PIT1_Q6_M00802 TRANSFAC + 58000223 58000240 8.0E-06 TATTCATCTTTATGCTTT 18 V_NFE2L2_01_M02263 TRANSFAC + 58000421 58000431 3.0E-06 ATGATTAAGCA 11 V_LHX4_01_M01421 TRANSFAC - 58000503 58000519 4.0E-06 TACACTGATTAGTTTAG 17

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.