Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

SLC5A10 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 125206 solute carrier family 5 (sodium/glucose cotransporter), member 10 chr17 + 18850477 - 18855977 18855477 Transcription Factor Binding Sites   Download all TFBS in the SLC5A10 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints EOMES_TBX_DBD_dimeric_20_1 SELEX + 18854428 18854447 9.0E-06 TAACACTTCTGGAAGTGCTG 20 EOMES_TBX_DBD_dimeric_20_1 SELEX - 18854428 18854447 1.0E-05 CAGCACTTCCAGAAGTGTTA 20 PITX3_homeodomain_DBD_monomeric_9_1 SELEX - 18854335 18854343 2.0E-06 ATTAATCCC 9 MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 18853175 18853192 7.0E-06 ACAATTCTGAAGCACTTA 18 RARA_nuclearreceptor_full_dimeric_18_1 SELEX - 18855460 18855477 8.0E-06 GAGGGGCAAACCAGGTCA 18 YY1_C2H2_full_monomeric_11_1 SELEX - 18854664 18854674 2.0E-06 TCCGCCATTAC 11 ESRRG_nuclearreceptor_full_dimeric_17_1 SELEX - 18855460 18855476 5.0E-06 AGGGGCAAACCAGGTCA 17 CEBPA_MA0102.2 JASPAR - 18852990 18852998 4.0E-06 TTTTGCAAT 9 RARG_nuclearreceptor_full_dimeric_17_1 SELEX - 18855460 18855476 8.0E-06 AGGGGCAAACCAGGTCA 17 EWSR1-FLI1_MA0149.1 JASPAR - 18855261 18855278 4.0E-06 GGAGGAAAGGAAGGAGCC 18 EWSR1-FLI1_MA0149.1 JASPAR - 18855265 18855282 0.0E+00 GGGAGGAGGAAAGGAAGG 18 SOX7_HMG_full_dimeric_17_2 SELEX - 18853191 18853207 7.0E-06 TATGAGTTTCTTTCTTA 17 ISL2_homeodomain_DBD_monomeric_8_1 SELEX + 18853186 18853193 1.0E-05 GCACTTAA 8 NKX3-2_homeodomain_DBD_monomeric_9_1 SELEX + 18853185 18853193 7.0E-06 AGCACTTAA 9 Pax4_MA0068.1 JASPAR - 18852850 18852879 3.0E-06 AAAAAGTTTAGAAATTTCCTACATAACCAC 30 ZNF238_C2H2_full_monomeric_13_1 SELEX - 18854622 18854634 9.0E-06 AGTGCAGATGTGG 13 PITX1_homeodomain_full_monomeric_8_1 SELEX - 18854335 18854342 1.0E-05 TTAATCCC 8 RARG_nuclearreceptor_DBD_dimeric_17_2 SELEX - 18855460 18855476 7.0E-06 AGGGGCAAACCAGGTCA 17 HOXA5_MA0158.1 JASPAR - 18854546 18854553 7.0E-06 CACTAATT 8 HNF1A_homeodomain_full_dimeric_15_1 SELEX + 18854337 18854351 8.0E-06 GATTAATTTTTACCC 15 HNF1A_homeodomain_full_dimeric_15_1 SELEX + 18854361 18854375 7.0E-06 GGTTATTGAGTAACA 15 HNF1A_homeodomain_full_dimeric_15_1 SELEX - 18854361 18854375 8.0E-06 TGTTACTCAATAACC 15 SREBF2_bHLH_DBD_dimeric_10_1 SELEX - 18859152 18859161 7.0E-06 CTCACGTGAT 10 BARHL2_homeodomain_full_monomeric_10_1 SELEX + 18852967 18852976 9.0E-06 AATAAATGAT 10 Srebf1_bHLH_DBD_dimeric_10_1 SELEX + 18859152 18859161 9.0E-06 ATCACGTGAG 10 Srebf1_bHLH_DBD_dimeric_10_1 SELEX - 18859152 18859161 7.0E-06 CTCACGTGAT 10 SOX9_HMG_full_dimeric_16_3 SELEX + 18852968 18852983 2.0E-06 ATAAATGATCAGTCTT 16 Lhx3_MA0135.1 JASPAR + 18854336 18854348 7.0E-06 GGATTAATTTTTA 13 RARG_nuclearreceptor_DBD_dimeric_17_1 SELEX - 18855460 18855476 1.0E-05 AGGGGCAAACCAGGTCA 17 TBX20_TBX_full_dimeric_16_1 SELEX - 18854420 18854435 4.0E-06 AAGTGTTAATGAGTGA 16 Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 18853175 18853192 8.0E-06 ACAATTCTGAAGCACTTA 18 HNF1B_homeodomain_full_dimeric_13_1 SELEX - 18854338 18854350 4.0E-06 GGTAAAAATTAAT 13 HNF1B_homeodomain_full_dimeric_13_1 SELEX + 18854362 18854374 9.0E-06 GTTATTGAGTAAC 13 HNF1B_homeodomain_full_dimeric_13_1 SELEX - 18854362 18854374 7.0E-06 GTTACTCAATAAC 13 RHOXF1_homeodomain_full_monomeric_8_1 SELEX - 18854335 18854342 1.0E-05 TTAATCCC 8 MAX_MA0058.1 JASPAR - 18859113 18859122 7.0E-06 AACCACGTGG 10 MAX_MA0058.1 JASPAR + 18859151 18859160 8.0E-06 GATCACGTGA 10 TFEC_bHLH_DBD_dimeric_10_1 SELEX + 18859152 18859161 4.0E-06 ATCACGTGAG 10 GSC2_homeodomain_DBD_monomeric_10_1 SELEX - 18854334 18854343 7.0E-06 ATTAATCCCC 10 HNF1B_homeodomain_full_dimeric_15_1 SELEX + 18854337 18854351 1.0E-05 GATTAATTTTTACCC 15 HNF1B_homeodomain_full_dimeric_15_1 SELEX + 18854361 18854375 8.0E-06 GGTTATTGAGTAACA 15 HNF1B_homeodomain_full_dimeric_15_1 SELEX - 18854361 18854375 6.0E-06 TGTTACTCAATAACC 15 ELF5_MA0136.1 JASPAR + 18853713 18853721 2.0E-06 TATTTCCTT 9 HNF1A_MA0046.1 JASPAR + 18854337 18854350 1.0E-06 GATTAATTTTTACC 14 V_OBOX5_05_M03066 TRANSFAC + 18854331 18854347 0.0E+00 CGAGGGGATTAATTTTT 17 V_OBOX1_01_M01450 TRANSFAC + 18854330 18854346 5.0E-06 CCGAGGGGATTAATTTT 17 V_NKX29_01_M01352 TRANSFAC - 18853179 18853195 5.0E-06 TCTTAAGTGCTTCAGAA 17 V_NKX29_01_M01352 TRANSFAC + 18853180 18853196 3.0E-06 TCTGAAGCACTTAAGAA 17 V_HOXA13_02_M01297 TRANSFAC - 18853709 18853717 3.0E-06 AAATAAACC 9 V_IK_Q5_M01169 TRANSFAC - 18854282 18854291 3.0E-06 TTTGGGAGGC 10 V_ISL2_01_M01328 TRANSFAC - 18853700 18853715 1.0E-05 ATAAACCACTTAGTGA 16 V_OTX_Q1_M01117 TRANSFAC + 18854337 18854344 5.0E-06 GATTAATT 8 V_VAX2_01_M01327 TRANSFAC + 18854418 18854433 9.0E-06 GCTCACTCATTAACAC 16 V_LYF1_01_M00141 TRANSFAC - 18854283 18854291 9.0E-06 TTTGGGAGG 9 V_CEBPB_01_M00109 TRANSFAC - 18852863 18852876 2.0E-06 AAGTTTAGAAATTT 14 V_REX1_01_M01695 TRANSFAC - 18854654 18854663 3.0E-06 GCAGCCATTG 10 V_RPC155_01_M01798 TRANSFAC + 18859163 18859178 0.0E+00 CCAGGAGTTCAAGACC 16 V_CRX_Q4_M00623 TRANSFAC - 18854542 18854554 1.0E-05 TCACTAATTCTAT 13 V_OBOX5_02_M01480 TRANSFAC + 18854331 18854347 0.0E+00 CGAGGGGATTAATTTTT 17 V_MYCMAX_01_M00118 TRANSFAC + 18859110 18859123 8.0E-06 TGTCCACGTGGTTC 14 V_MYCMAX_01_M00118 TRANSFAC - 18859110 18859123 8.0E-06 GAACCACGTGGACA 14 V_SREBP1_01_M00220 TRANSFAC + 18859151 18859161 2.0E-06 GATCACGTGAG 11 V_CMYC_01_M01145 TRANSFAC - 18859111 18859122 5.0E-06 AACCACGTGGAC 12 V_NKX31_02_M02782 TRANSFAC + 18853181 18853197 1.0E-06 CTGAAGCACTTAAGAAA 17 V_NKX31_02_M02782 TRANSFAC - 18853699 18853715 1.0E-06 ATAAACCACTTAGTGAT 17 V_NKX26_01_M01322 TRANSFAC + 18853182 18853197 7.0E-06 TGAAGCACTTAAGAAA 16 V_MRF2_01_M00454 TRANSFAC - 18852976 18852989 8.0E-06 AAGCACAAGACTGA 14 MYC_MAX_MA0059.1 JASPAR - 18859112 18859122 4.0E-06 AACCACGTGGA 11 V_MAZ_Q6_01_M02023 TRANSFAC - 18855268 18855281 2.0E-06 GGAGGAGGAAAGGA 14 V_AP2BETA_Q3_M01858 TRANSFAC + 18854322 18854337 6.0E-06 GCTCCTGGCCGAGGGG 16 V_HNF1_Q6_01_M01011 TRANSFAC - 18854334 18854354 6.0E-06 TGCGGGTAAAAATTAATCCCC 21 V_OBOX2_01_M01364 TRANSFAC + 18854330 18854346 3.0E-06 CCGAGGGGATTAATTTT 17 V_NKX22_02_M01372 TRANSFAC + 18853182 18853198 1.0E-05 TGAAGCACTTAAGAAAG 17 V_ELF5_01_M01197 TRANSFAC - 18853713 18853723 7.0E-06 AGAAGGAAATA 11 V_USF_01_M00121 TRANSFAC + 18859150 18859163 7.0E-06 AGATCACGTGAGCC 14 V_USF_01_M00121 TRANSFAC - 18859150 18859163 7.0E-06 GGCTCACGTGATCT 14 V_HMX1_02_M01481 TRANSFAC + 18853182 18853198 9.0E-06 TGAAGCACTTAAGAAAG 17 V_ZIC3_05_M02941 TRANSFAC - 18854523 18854537 6.0E-06 GTACACAGCAGGGCT 15 V_CRX_02_M01436 TRANSFAC + 18854330 18854345 8.0E-06 CCGAGGGGATTAATTT 16 V_HOXA5_03_M02271 TRANSFAC - 18854546 18854553 7.0E-06 CACTAATT 8 V_NKX23_01_M01457 TRANSFAC + 18853180 18853195 1.0E-06 TCTGAAGCACTTAAGA 16 V_NKX23_01_M01457 TRANSFAC - 18853180 18853195 0.0E+00 TCTTAAGTGCTTCAGA 16 V_NKX32_02_M01482 TRANSFAC + 18853181 18853197 0.0E+00 CTGAAGCACTTAAGAAA 17 V_NKX32_02_M01482 TRANSFAC - 18853699 18853715 1.0E-06 ATAAACCACTTAGTGAT 17 V_KAISO_01_M01119 TRANSFAC - 18852959 18852968 1.0E-06 TTCCTGCTAA 10 V_OTX2_Q3_M01719 TRANSFAC + 18854332 18854344 6.0E-06 GAGGGGATTAATT 13 V_ZFP105_04_M02931 TRANSFAC - 18854358 18854374 9.0E-06 GTTACTCAATAACCCTG 17 V_AML2_Q3_01_M01854 TRANSFAC + 18855386 18855396 7.0E-06 CCACATCATGG 11 V_MTF1_06_M02882 TRANSFAC + 18853188 18853201 4.0E-06 ACTTAAGAAAGAAA 14 V_TTF1_Q5_M02034 TRANSFAC + 18853184 18853197 4.0E-06 AAGCACTTAAGAAA 14 V_OBOX2_02_M03064 TRANSFAC + 18854330 18854346 3.0E-06 CCGAGGGGATTAATTTT 17 V_CEBPA_01_M00116 TRANSFAC + 18852988 18853001 0.0E+00 TTATTGCAAAAGCA 14 V_STRA13_01_M00985 TRANSFAC - 18859150 18859163 4.0E-06 GGCTCACGTGATCT 14 V_IPF1_05_M01255 TRANSFAC + 18854422 18854433 8.0E-06 ACTCATTAACAC 12 V_HNF1_01_M00132 TRANSFAC + 18854337 18854351 0.0E+00 GATTAATTTTTACCC 15 V_HNF1_01_M00132 TRANSFAC + 18854361 18854375 3.0E-06 GGTTATTGAGTAACA 15 V_NKX3A_02_M01383 TRANSFAC + 18853180 18853196 5.0E-06 TCTGAAGCACTTAAGAA 17 V_CBF_01_M01079 TRANSFAC + 18853701 18853716 9.0E-06 CACTAAGTGGTTTATT 16 V_PITX1_01_M01484 TRANSFAC + 18854330 18854346 6.0E-06 CCGAGGGGATTAATTTT 17 V_DMRT7_01_M01151 TRANSFAC + 18853170 18853183 9.0E-06 TGGTCACAATTCTG 14 V_BDP1_01_M01796 TRANSFAC - 18859167 18859178 2.0E-06 GGTCTTGAACTC 12 V_NKX22_01_M00485 TRANSFAC - 18853184 18853193 2.0E-06 TTAAGTGCTT 10 V_DOBOX5_01_M01463 TRANSFAC + 18854331 18854347 0.0E+00 CGAGGGGATTAATTTTT 17 V_FPM315_01_M01587 TRANSFAC - 18855273 18855284 2.0E-06 GTGGGAGGAGGA 12 V_OTX2_01_M01387 TRANSFAC + 18854331 18854347 0.0E+00 CGAGGGGATTAATTTTT 17 V_T3RBETA_Q6_01_M02119 TRANSFAC - 18855459 18855475 5.0E-06 GGGGCAAACCAGGTCAG 17 V_CEBPB_Q6_M01896 TRANSFAC - 18852989 18852998 4.0E-06 TTTTGCAATA 10 V_EWSR1FLI1_01_M02252 TRANSFAC - 18855261 18855278 4.0E-06 GGAGGAAAGGAAGGAGCC 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 18855265 18855282 0.0E+00 GGGAGGAGGAAAGGAAGG 18 V_EFC_Q6_M00626 TRANSFAC + 18854466 18854479 5.0E-06 AAATGCTTTGCAAA 14 V_EKLF_Q5_M01874 TRANSFAC - 18859097 18859106 5.0E-06 CCACACCCAG 10 V_GSC_01_M01428 TRANSFAC - 18854331 18854347 0.0E+00 AAAAATTAATCCCCTCG 17 V_DR3_Q4_M00966 TRANSFAC + 18855449 18855469 1.0E-06 GAAACCCTTTCTGACCTGGTT 21 V_PITX2_01_M01447 TRANSFAC + 18854331 18854347 0.0E+00 CGAGGGGATTAATTTTT 17 V_ARP1_01_M00155 TRANSFAC - 18859158 18859173 4.0E-06 TGAACTCCTGGGCTCA 16 V_ELF5_04_M02241 TRANSFAC + 18853713 18853721 2.0E-06 TATTTCCTT 9 V_HMX3_02_M01413 TRANSFAC + 18853182 18853198 8.0E-06 TGAAGCACTTAAGAAAG 17 V_HNF1A_01_M02162 TRANSFAC + 18854337 18854350 1.0E-06 GATTAATTTTTACC 14 V_OBOX5_01_M01381 TRANSFAC + 18854331 18854347 0.0E+00 CGAGGGGATTAATTTTT 17 V_OBOX3_02_M03065 TRANSFAC + 18854330 18854346 2.0E-06 CCGAGGGGATTAATTTT 17 V_OTX1_01_M01366 TRANSFAC + 18854331 18854347 0.0E+00 CGAGGGGATTAATTTTT 17 V_OBOX6_06_M03067 TRANSFAC - 18854331 18854347 0.0E+00 AAAAATTAATCCCCTCG 17 V_OBOX3_01_M01466 TRANSFAC + 18854330 18854346 2.0E-06 CCGAGGGGATTAATTTT 17 V_PAX4_04_M00380 TRANSFAC - 18852850 18852879 1.0E-05 AAAAAGTTTAGAAATTTCCTACATAACCAC 30 V_NF1_Q6_M00193 TRANSFAC + 18853027 18853044 7.0E-06 ACTTGGCAGGCAGGCAGA 18 V_CEBPA_Q6_M01866 TRANSFAC - 18852989 18853001 2.0E-06 TGCTTTTGCAATA 13

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.