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SMCR7 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 125170 Smith-Magenis syndrome chromosome region, candidate 7 chr17 + 18158847 - 18164923 18164423 Transcription Factor Binding Sites   Download all TFBS in the SMCR7 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SP3_C2H2_DBD_monomeric_11_1 SELEX - 18164126 18164136 3.0E-06 GCCACGCCCCC 11 SOX10_HMG_full_dimeric_15_3 SELEX + 18165531 18165545 9.0E-06 AGGCCTTGCAGTCAT 15 Tp53_p53l_DBD_dimeric_18_1 SELEX - 18163708 18163725 9.0E-06 ACAGGTGACGTGACAGGC 18 ZNF713_C2H2_full_monomeric_17_1 SELEX + 18161330 18161346 7.0E-06 CAGACAACTGCCACCCA 17 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 18164126 18164136 1.0E-06 GCCACGCCCCC 11 NHLH1_MA0048.1 JASPAR + 18161319 18161330 1.0E-05 CAGCAGCTGCTC 12 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 18164637 18164648 4.0E-06 ACTAAAAATAAG 12 TBP_MA0108.2 JASPAR - 18162954 18162968 8.0E-06 GTATAAATAAGGCCG 15 NFKB1_MA0105.1 JASPAR + 18160688 18160698 4.0E-06 GGGGGATCCCC 11 NFKB1_MA0105.1 JASPAR - 18160688 18160698 3.0E-06 GGGGATCCCCC 11 NFKB1_MA0105.1 JASPAR + 18160689 18160699 3.0E-06 GGGGATCCCCC 11 NFKB1_MA0105.1 JASPAR - 18160689 18160699 4.0E-06 GGGGGATCCCC 11 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 18164637 18164648 4.0E-06 ACTAAAAATAAG 12 TFAP2C_TFAP_full_dimeric_13_1 SELEX + 18163930 18163942 9.0E-06 TGCCCCCGGGGCC 13 Klf4_MA0039.2 JASPAR - 18161267 18161276 5.0E-06 TGGGTGGGGC 10 ZNF524_C2H2_full_dimeric_12_1 SELEX - 18163952 18163963 2.0E-06 ACCCTGGAACCC 12 NFKB2_NFAT_DBD_dimeric_13_1 SELEX + 18160688 18160700 3.0E-06 GGGGGATCCCCCT 13 NFKB2_NFAT_DBD_dimeric_13_1 SELEX - 18160688 18160700 4.0E-06 AGGGGGATCCCCC 13 TFAP2B_TFAP_DBD_dimeric_12_1 SELEX + 18162265 18162276 4.0E-06 CGCCCCAGGGCA 12 MEF2B_MADS_full_dimeric_12_1 SELEX - 18164637 18164648 4.0E-06 ACTAAAAATAAG 12 MEF2A_MA0052.1 JASPAR + 18164638 18164647 2.0E-06 TTATTTTTAG 10 Rarb_nuclearreceptor_DBD_dimeric_17_1 SELEX - 18164795 18164811 7.0E-06 AGATGACCATGAGGTCA 17 Ascl2_bHLH_DBD_dimeric_10_1 SELEX + 18161320 18161329 2.0E-06 AGCAGCTGCT 10 Ascl2_bHLH_DBD_dimeric_10_1 SELEX - 18161320 18161329 2.0E-06 AGCAGCTGCT 10 SP4_C2H2_full_monomeric_17_1 SELEX + 18162088 18162104 3.0E-06 CCGGCCCCGCCCCTTTA 17 NFKB1_NFAT_DBD_dimeric_13_1 SELEX + 18160687 18160699 7.0E-06 TGGGGGATCCCCC 13 NFKB1_NFAT_DBD_dimeric_13_1 SELEX - 18160687 18160699 6.0E-06 GGGGGATCCCCCA 13 NFKB1_NFAT_DBD_dimeric_13_1 SELEX + 18160688 18160700 2.0E-06 GGGGGATCCCCCT 13 NFKB1_NFAT_DBD_dimeric_13_1 SELEX - 18160688 18160700 2.0E-06 AGGGGGATCCCCC 13 Klf12_C2H2_DBD_monomeric_15_1 SELEX - 18164123 18164137 9.0E-06 GGCCACGCCCCCGAT 15 TFAP2C_TFAP_full_dimeric_12_1 SELEX + 18162265 18162276 2.0E-06 CGCCCCAGGGCA 12 Myf_MA0055.1 JASPAR - 18161319 18161330 1.0E-05 GAGCAGCTGCTG 12 Meis2_MEIS_DBD_dimeric_12_1 SELEX + 18163066 18163077 1.0E-05 TGACAGGCGTGA 12 HSFY2_HSF_DBD_dimeric_9_1 SELEX - 18164191 18164199 8.0E-06 ATTCGAACG 9 RUNX1_MA0002.2 JASPAR + 18160622 18160632 3.0E-06 CTCTGTGGTTA 11 TFAP2A_TFAP_DBD_dimeric_12_1 SELEX + 18162265 18162276 5.0E-06 CGCCCCAGGGCA 12 NHLH1_bHLH_full_dimeric_10_1 SELEX + 18161320 18161329 7.0E-06 AGCAGCTGCT 10 NHLH1_bHLH_full_dimeric_10_1 SELEX - 18161320 18161329 7.0E-06 AGCAGCTGCT 10 Tcfap2a_TFAP_DBD_dimeric_12_1 SELEX + 18162265 18162276 5.0E-06 CGCCCCAGGGCA 12 NFE2L2_MA0150.1 JASPAR - 18164674 18164684 9.0E-06 GTGACTCAGCC 11 RXR_RAR_DR5_MA0159.1 JASPAR - 18164795 18164811 9.0E-06 AGATGACCATGAGGTCA 17 V_KLF15_Q2_M01714 TRANSFAC + 18164122 18164135 5.0E-06 GATCGGGGGCGTGG 14 V_FREAC7_01_M00293 TRANSFAC - 18162956 18162971 3.0E-06 AAAGTATAAATAAGGC 16 V_GEN_INI_B_M00315 TRANSFAC + 18163100 18163107 1.0E-05 CCTCATTT 8 V_TCF3_01_M01594 TRANSFAC - 18163140 18163152 6.0E-06 TCTTTGTTAATTT 13 V_TCF3_01_M01594 TRANSFAC + 18163211 18163223 1.0E-06 GTTTTGTTTTGTT 13 V_AML_Q6_M00769 TRANSFAC + 18160620 18160634 5.0E-06 GGCTCTGTGGTTAGC 15 V_FLI1_Q6_M01208 TRANSFAC + 18162387 18162397 8.0E-06 CAGGAAGTGCC 11 V_XFD1_01_M00267 TRANSFAC - 18162956 18162969 4.0E-06 AGTATAAATAAGGC 14 V_E2F1_Q3_01_M00938 TRANSFAC + 18164102 18164117 5.0E-06 TTGGCGCGCGACGGAA 16 V_OBOX1_01_M01450 TRANSFAC - 18161420 18161436 8.0E-06 TGAAGGGGCTTAAAAGT 17 V_ZFX_01_M01593 TRANSFAC - 18161726 18161741 1.0E-05 GGGCAGGCCGGGGACG 16 V_ZFX_01_M01593 TRANSFAC + 18161770 18161785 5.0E-06 GCGGAGGCCTCGGAGG 16 V_ZFX_01_M01593 TRANSFAC - 18164275 18164290 3.0E-06 GAGCAGGCCGCGCAGC 16 V_MMEF2_Q6_M00405 TRANSFAC - 18164636 18164651 9.0E-06 CAGACTAAAAATAAGA 16 V_MAFB_03_M02879 TRANSFAC + 18163103 18163117 2.0E-06 CATTTGTAAAATACT 15 V_SP1_Q6_01_M00931 TRANSFAC - 18161812 18161821 7.0E-06 GGGGCGGGGT 10 V_SP1_Q6_01_M00931 TRANSFAC - 18162091 18162100 4.0E-06 GGGGCGGGGC 10 V_MEF2_02_M00231 TRANSFAC - 18164633 18164654 4.0E-06 CCCCAGACTAAAAATAAGACGG 22 V_MEIS1AHOXA9_01_M00420 TRANSFAC - 18161329 18161342 7.0E-06 TGGCAGTTGTCTGA 14 V_CEBP_01_M00159 TRANSFAC - 18163140 18163152 7.0E-06 TCTTTGTTAATTT 13 V_SPZ1_01_M00446 TRANSFAC + 18164320 18164334 1.0E-05 GGAGGAGGGAAGGCC 15 V_AFP1_Q6_M00616 TRANSFAC - 18164635 18164645 9.0E-06 AAAAATAAGAC 11 V_SP1_02_M01303 TRANSFAC + 18161613 18161623 3.0E-06 GGGGCGGGGAG 11 V_SP1_02_M01303 TRANSFAC - 18161811 18161821 3.0E-06 GGGGCGGGGTG 11 V_AIRE_02_M01000 TRANSFAC + 18163199 18163223 3.0E-06 GGTTATTATTCCGTTTTGTTTTGTT 25 V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC - 18161268 18161283 0.0E+00 CAGCCAGTGGGTGGGG 16 V_NFY_Q6_01_M00775 TRANSFAC - 18163829 18163841 6.0E-06 GTTCAGCCAATGA 13 V_MEF2A_Q6_M02024 TRANSFAC + 18164639 18164648 4.0E-06 TATTTTTAGT 10 V_LXRB_RXRA_Q5_M02021 TRANSFAC - 18164788 18164802 5.0E-06 TGAGGTCACAGCCTG 15 V_BARBIE_01_M00238 TRANSFAC - 18163746 18163760 2.0E-06 ATTTAAAGGTGCAGG 15 V_BCL6_02_M01185 TRANSFAC + 18163114 18163127 0.0E+00 TACTTTCTAAGGTT 14 V_RPC155_01_M01798 TRANSFAC - 18163008 18163023 1.0E-06 CCAGGAGATCAAGACC 16 V_ETS_Q4_M00771 TRANSFAC - 18162387 18162398 2.0E-06 AGGCACTTCCTG 12 V_ZNF219_01_M01122 TRANSFAC - 18163806 18163817 6.0E-06 CGCCCCCCAGCC 12 V_GC_01_M00255 TRANSFAC - 18162089 18162102 0.0E+00 AAGGGGCGGGGCCG 14 V_GEN_INI3_B_M00314 TRANSFAC + 18163100 18163107 1.0E-05 CCTCATTT 8 V_FOXA2_02_M02853 TRANSFAC + 18163139 18163153 3.0E-06 CAAATTAACAAAGAA 15 V_MYF_01_M01302 TRANSFAC - 18161319 18161330 1.0E-05 GAGCAGCTGCTG 12 V_SPI1_03_M02078 TRANSFAC + 18161463 18161472 1.0E-05 AGGGGAAGTG 10 V_RUNX1_01_M02257 TRANSFAC + 18160622 18160632 3.0E-06 CTCTGTGGTTA 11 V_GFI1_01_M00250 TRANSFAC + 18161379 18161402 5.0E-06 CACCAACAAATCTCACTATACTCC 24 V_TATA_01_M00252 TRANSFAC - 18162954 18162968 8.0E-06 GTATAAATAAGGCCG 15 V_RFX1_01_M00280 TRANSFAC + 18164718 18164734 2.0E-06 TGGTCACCTGGCAACTG 17 V_SP4_03_M02810 TRANSFAC - 18163806 18163822 7.0E-06 GGTCCCGCCCCCCAGCC 17 V_RSRFC4_Q2_M00407 TRANSFAC - 18164634 18164650 1.0E-06 AGACTAAAAATAAGACG 17 V_AMEF2_Q6_M00403 TRANSFAC - 18164366 18164383 5.0E-06 GTGGCTGAAAATAACCCA 18 V_SP1_Q6_M00196 TRANSFAC - 18162090 18162102 1.0E-06 AAGGGGCGGGGCC 13 V_SP1_Q6_M00196 TRANSFAC + 18163810 18163822 5.0E-06 GGGGGGCGGGACC 13 V_FOXK1_04_M02856 TRANSFAC - 18162476 18162490 2.0E-06 ACAAAAACAACACAT 15 V_AP2BETA_Q3_M01858 TRANSFAC + 18163800 18163815 9.0E-06 GCTGTCGGCTGGGGGG 16 V_ASCL2_03_M02737 TRANSFAC + 18161317 18161333 3.0E-06 TCCAGCAGCTGCTCAGA 17 V_ATF1_Q6_01_M01861 TRANSFAC + 18163713 18163721 4.0E-06 TCACGTCAC 9 V_NFKAPPAB50_01_M00051 TRANSFAC + 18160689 18160698 4.0E-06 GGGGATCCCC 10 V_NFKAPPAB50_01_M00051 TRANSFAC - 18160689 18160698 4.0E-06 GGGGATCCCC 10 V_PEBP_Q6_M00984 TRANSFAC - 18160620 18160634 5.0E-06 GCTAACCACAGAGCC 15 V_AHRARNT_02_M00237 TRANSFAC - 18161914 18161932 8.0E-06 GCCGGGCGCGTGCCGGGCC 19 V_PBX1_05_M01967 TRANSFAC + 18163188 18163201 6.0E-06 AGTGAGTGGCAGGT 14 V_KLF7_03_M02773 TRANSFAC + 18162088 18162103 2.0E-06 CCGGCCCCGCCCCTTT 16 V_MEF2_Q6_01_M00941 TRANSFAC + 18164636 18164647 3.0E-06 TCTTATTTTTAG 12 V_ATF3_Q6_M00513 TRANSFAC - 18162339 18162352 9.0E-06 CTCTGAGGTCAGGG 14 V_SMAD4_Q6_M00733 TRANSFAC + 18161562 18161576 9.0E-06 GCCGGGCAGCCATCC 15 V_BRACH_01_M00150 TRANSFAC - 18163850 18163873 2.0E-06 AGTCCAGCGCACAGGTGCCAAAAT 24 V_SP1_01_M00008 TRANSFAC - 18161812 18161821 3.0E-06 GGGGCGGGGT 10 V_SOX11_03_M02795 TRANSFAC + 18163140 18163156 2.0E-06 AAATTAACAAAGAATGC 17 V_FOXO1_Q5_M01216 TRANSFAC - 18163213 18163221 8.0E-06 CAAAACAAA 9 V_KAISO_01_M01119 TRANSFAC + 18164238 18164247 8.0E-06 ATCCTGCGAA 10 V_SP4_Q5_M01273 TRANSFAC + 18162091 18162101 8.0E-06 GCCCCGCCCCT 11 V_CAAT_01_M00254 TRANSFAC - 18163829 18163840 3.0E-06 TTCAGCCAATGA 12 V_ALPHACP1_01_M00687 TRANSFAC - 18163828 18163838 1.0E-05 CAGCCAATGAA 11 V_TBP_01_M00471 TRANSFAC - 18162960 18162967 4.0E-06 TATAAATA 8 V_T3R_01_M00239 TRANSFAC - 18161598 18161613 4.0E-06 CTCTGAGGTCACACGC 16 V_T3R_01_M00239 TRANSFAC - 18164790 18164805 4.0E-06 CCATGAGGTCACAGCC 16 V_FAC1_01_M00456 TRANSFAC - 18162475 18162488 2.0E-06 AAAAACAACACATG 14 V_FAC1_01_M00456 TRANSFAC - 18163211 18163224 9.0E-06 AAACAAAACAAAAC 14 V_SMAD4_04_M02898 TRANSFAC - 18161609 18161625 8.0E-06 GCCTCCCCGCCCCTCTG 17 V_CNOT3_01_M01253 TRANSFAC + 18162024 18162033 4.0E-06 GGCCGCGCCG 10 V_AREB6_02_M00413 TRANSFAC - 18160597 18160608 4.0E-06 TTTCACCTGAAA 12 V_FOXL1_02_M02857 TRANSFAC - 18163210 18163225 0.0E+00 AAAACAAAACAAAACG 16 V_FOXL1_04_M02753 TRANSFAC - 18162955 18162971 4.0E-06 AAAGTATAAATAAGGCC 17 V_FOXJ3_06_M02855 TRANSFAC - 18163210 18163226 0.0E+00 CAAAACAAAACAAAACG 17 V_DELTAEF1_01_M00073 TRANSFAC - 18160598 18160608 1.0E-06 TTTCACCTGAA 11 V_PITX1_01_M01484 TRANSFAC - 18161420 18161436 8.0E-06 TGAAGGGGCTTAAAAGT 17 V_GEN_INI2_B_M00313 TRANSFAC + 18163100 18163107 1.0E-05 CCTCATTT 8 V_TCFAP2B_03_M02820 TRANSFAC + 18162264 18162277 8.0E-06 GCGCCCCAGGGCAG 14 V_NRSF_01_M00256 TRANSFAC + 18161343 18161363 1.0E-05 CCCAGCACCTGGCACACCGGC 21 V_RSRFC4_01_M00026 TRANSFAC + 18164635 18164650 2.0E-06 GTCTTATTTTTAGTCT 16 V_TITF1_Q3_M00432 TRANSFAC - 18161240 18161249 8.0E-06 ACTCAAGAAT 10 V_RXR_RAR_01_M02272 TRANSFAC - 18164795 18164811 9.0E-06 AGATGACCATGAGGTCA 17 V_CHX10_01_M00437 TRANSFAC - 18163135 18163148 9.0E-06 TGTTAATTTGCTCA 14 V_RFX3_05_M02892 TRANSFAC - 18163121 18163143 8.0E-06 ATTTGCTCATGGTGACAACCTTA 23 V_MEF2_01_M00006 TRANSFAC - 18164366 18164381 3.0E-06 GGCTGAAAATAACCCA 16 V_SP1_Q2_01_M00933 TRANSFAC - 18161612 18161621 7.0E-06 CCCCGCCCCT 10 V_SP1_Q2_01_M00933 TRANSFAC + 18162092 18162101 7.0E-06 CCCCGCCCCT 10 V_MEF2A_05_M01301 TRANSFAC + 18164636 18164647 3.0E-06 TCTTATTTTTAG 12 V_NFE2L2_01_M02263 TRANSFAC - 18164674 18164684 9.0E-06 GTGACTCAGCC 11 V_HMEF2_Q6_M00406 TRANSFAC - 18164366 18164381 0.0E+00 GGCTGAAAATAACCCA 16 V_CP2_01_M00072 TRANSFAC + 18163086 18163096 6.0E-06 GCCCTACCCAG 11 V_NFYA_Q5_M02106 TRANSFAC - 18163825 18163838 7.0E-06 CAGCCAATGAAGGG 14 V_SP1_Q4_01_M00932 TRANSFAC - 18162090 18162102 0.0E+00 AAGGGGCGGGGCC 13 V_SMAD1_01_M01590 TRANSFAC + 18163142 18163153 6.0E-06 ATTAACAAAGAA 12 V_NANOG_02_M01247 TRANSFAC + 18163138 18163157 6.0E-06 GCAAATTAACAAAGAATGCA 20 V_NANOG_02_M01247 TRANSFAC - 18163206 18163225 4.0E-06 AAAACAAAACAAAACGGAAT 20 V_T3RALPHA_Q6_M01724 TRANSFAC - 18162341 18162351 5.0E-06 TCTGAGGTCAG 11

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.